Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:56 (3908564): wrapper (7.7.26015): starting
16:29:56 (3908564): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 16:29:56] Arguments: --nthreads 4
[2026-03-03 16:29:56] Threads: 4
[2026-03-03 16:29:56] Checking for CVMFS
[2026-03-03 16:29:56] No cvmfs_config command found, will try listing directly
[2026-03-03 16:29:56] CVMFS is ok
[2026-03-03 16:29:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 16:29:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 16:29:56] Further information can be found at the LHC@home message board.
[2026-03-03 16:29:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 16:29:56] Checking for apptainer binary...
[2026-03-03 16:29:56] which: no apptainer in ((null))
[2026-03-03 16:29:56] apptainer is not installed, using version from CVMFS
[2026-03-03 16:29:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 16:29:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-03 16:29:56] apptainer works
[2026-03-03 16:29:56] Set ATHENA_PROC_NUMBER=4
[2026-03-03 16:29:56] Set ATHENA_CORE_NUMBER=4
[2026-03-03 16:29:56] Starting ATLAS job with PandaID=7034332101
[2026-03-03 16:29:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 19:08:09]  *** The last 200 lines of the pilot log: ***
[2026-03-03 19:08:09] 2026-03-03 17:40:52,945 | INFO     | time since job start (7833s) is within the limit (349056.0s)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,208 | INFO     | job 7034332101 has state=finished
[2026-03-03 19:08:09] 2026-03-03 17:40:53,208 | INFO     | preparing for final server update for job 7034332101 in state='finished'
[2026-03-03 19:08:09] 2026-03-03 17:40:53,208 | INFO     | reading metadata from: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-7034332101/jobReport.json
[2026-03-03 19:08:09] 2026-03-03 17:40:53,211 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot92/slots/0/workernode_map.json
[2026-03-03 19:08:09] 2026-03-03 17:40:53,211 | INFO     | this job has now completed (state=finished)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,211 | INFO     | log transfer has been attempted: DONE
[2026-03-03 19:08:09] 2026-03-03 17:40:53,211 | INFO     | job 7034332101 has finished - writing final server update
[2026-03-03 19:08:09] 2026-03-03 17:40:53,212 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2319324/.job.ad'
[2026-03-03 19:08:09] 2026-03-03 17:40:53,212 | INFO     | total number of processed events: 400 (read)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,236 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-7034332101/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,236 | INFO     | extracted standard info from prmon json
[2026-03-03 19:08:09] 2026-03-03 17:40:53,237 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 19:08:09] 2026-03-03 17:40:53,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 19:08:09] 2026-03-03 17:40:53,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 19:08:09] 2026-03-03 17:40:53,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 19:08:09] 2026-03-03 17:40:53,239 | INFO     | fitting pss+swap vs Time
[2026-03-03 19:08:09] 2026-03-03 17:40:53,240 | INFO     | sum of square deviations: 650252192.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,240 | INFO     | sum of deviations: -3765726786.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,241 | INFO     | mean x: 1772555722.5
[2026-03-03 19:08:09] 2026-03-03 17:40:53,241 | INFO     | mean y: 2346306.9375
[2026-03-03 19:08:09] 2026-03-03 17:40:53,241 | INFO     | intersect: 10267533638.894749
[2026-03-03 19:08:09] 2026-03-03 17:40:53,241 | INFO     | chi2: 1.4011972810055788
[2026-03-03 19:08:09] 2026-03-03 17:40:53,241 | INFO     | sum of square deviations: 576985702.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,242 | INFO     | sum of deviations: -3184692697.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,242 | INFO     | mean x: 1772555570.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,242 | INFO     | mean y: 2347516.81300813
[2026-03-03 19:08:09] 2026-03-03 17:40:53,242 | INFO     | intersect: 9786029780.062006
[2026-03-03 19:08:09] 2026-03-03 17:40:53,243 | INFO     | chi2: 1.4018807017033634
[2026-03-03 19:08:09] 2026-03-03 17:40:53,243 | INFO     | current chi2=1.4018807017033634 (change=-0.04877405252272089 %)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,243 | INFO     | right removable region: 122
[2026-03-03 19:08:09] 2026-03-03 17:40:53,243 | INFO     | sum of square deviations: 576985702.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,244 | INFO     | sum of deviations: -18691212520.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,244 | INFO     | mean x: 1772555875.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,244 | INFO     | mean y: 2376640.6422764226
[2026-03-03 19:08:09] 2026-03-03 17:40:53,244 | INFO     | intersect: 57423589069.92281
[2026-03-03 19:08:09] 2026-03-03 17:40:53,244 | INFO     | chi2: 0.06580534883170562
[2026-03-03 19:08:09] 2026-03-03 17:40:53,244 | INFO     | current chi2=0.06580534883170562 (change=95.30363427593294 %)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,245 | INFO     | sum of square deviations: 509440249.5
[2026-03-03 19:08:09] 2026-03-03 17:40:53,245 | INFO     | sum of deviations: -16730129437.0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,245 | INFO     | mean x: 1772556027.5
[2026-03-03 19:08:09] 2026-03-03 17:40:53,246 | INFO     | mean y: 2372200.4237288134
[2026-03-03 19:08:09] 2026-03-03 17:40:53,246 | INFO     | intersect: 58213500597.74824
[2026-03-03 19:08:09] 2026-03-03 17:40:53,246 | INFO     | chi2: 0.06555598870741915
[2026-03-03 19:08:09] 2026-03-03 17:40:53,246 | INFO     | current chi2=0.06555598870741915 (change=0.37893595082096126 %)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,246 | INFO     | left removable region: 20
[2026-03-03 19:08:09] 2026-03-03 17:40:53,246 | INFO     | sum of square deviations: 329031285.5
[2026-03-03 19:08:09] 2026-03-03 17:40:53,247 | INFO     | sum of deviations: -11153998992.499998
[2026-03-03 19:08:09] 2026-03-03 17:40:53,247 | INFO     | mean x: 1772556149.5
[2026-03-03 19:08:09] 2026-03-03 17:40:53,247 | INFO     | mean y: 2362605.343137255
[2026-03-03 19:08:09] 2026-03-03 17:40:53,247 | INFO     | intersect: 60091145578.148544
[2026-03-03 19:08:09] 2026-03-03 17:40:53,247 | INFO     | chi2: 0.06037546312748421
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | current memory leak: -33.90 B/s (using 102 data points, chi2=0.06)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | could have reported an average CPU frequency of 2603 MHz (8 samples)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | ..............................
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | . Timing measurements:
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | . get job = 0 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | . initial setup = 9 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,248 | INFO     | . payload setup = 9 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,249 | INFO     | . stage-in = 0 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,249 | INFO     | . payload execution = 7806 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,249 | INFO     | . stage-out = 0 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,249 | INFO     | . log creation = 0 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,249 | INFO     | ..............................
[2026-03-03 19:08:09] 2026-03-03 17:40:53,347 | INFO     | 
[2026-03-03 19:08:09] 2026-03-03 17:40:53,347 | INFO     | job summary report
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | --------------------------------------------------
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | PanDA job id: 7034332101
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | task id: 48700906
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | errors: (none)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | pilot state: finished 
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | transexitcode: 0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | exeerrorcode: 0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | exeerrordiag: 
[2026-03-03 19:08:09] 2026-03-03 17:40:53,348 | INFO     | exitcode: 0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | exitmsg: OK
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | cpuconsumptiontime: 29507 s
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | nevents: 400
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | neventsw: 0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | pid: 3928134
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | pgrp: 3928134
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | corecount: 4
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | event service: False
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | sizes: {0: 2286766, 1: 2286972, 11: 2287000, 7819: 2314886, 7820: 2323906, 7821: 2323962, 7822: 2324284}
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | --------------------------------------------------
[2026-03-03 19:08:09] 2026-03-03 17:40:53,349 | INFO     | 
[2026-03-03 19:08:09] 2026-03-03 17:40:53,350 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-03-03 19:08:09] 2026-03-03 17:40:53,378 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,381 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 19:08:09] 2026-03-03 17:40:53,381 | INFO     | job 7034332101 has completed (purged errors)
[2026-03-03 19:08:09] 2026-03-03 17:40:53,381 | INFO     | overall cleanup function is called
[2026-03-03 19:08:09] 2026-03-03 17:40:54,389 | INFO     | --- collectZombieJob: --- 10, [3928134]
[2026-03-03 19:08:09] 2026-03-03 17:40:54,390 | INFO     | zombie collector waiting for pid 3928134
[2026-03-03 19:08:09] 2026-03-03 17:40:54,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 19:08:09] 2026-03-03 17:40:54,390 | INFO     | collected zombie processes
[2026-03-03 19:08:09] 2026-03-03 17:40:54,390 | INFO     | will attempt to kill all subprocesses of pid=3928134
[2026-03-03 19:08:09] 2026-03-03 17:40:55,144 | INFO     | process IDs to be killed: [3928134] (in reverse order)
[2026-03-03 19:08:09] 2026-03-03 17:40:55,434 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 19:08:09] 2026-03-03 17:40:55,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 19:08:09] 2026-03-03 17:40:55,459 | INFO     | did not find any defunct processes belonging to 3928134
[2026-03-03 19:08:09] 2026-03-03 17:40:55,484 | INFO     | did not find any defunct processes belonging to 3928134
[2026-03-03 19:08:09] 2026-03-03 17:40:55,485 | INFO     | ready for new job
[2026-03-03 19:08:09] 2026-03-03 17:40:55,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 19:08:09] 2026-03-03 17:40:55,487 | INFO     | **************************************
[2026-03-03 19:08:09] 2026-03-03 17:40:55,487 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 19:08:09] 2026-03-03 17:40:55,487 | INFO     | **************************************
[2026-03-03 19:08:09] 2026-03-03 17:40:55,487 | INFO     | 
[2026-03-03 19:08:09] 2026-03-03 17:40:55,496 | INFO     | architecture information:
[2026-03-03 19:08:09] 2026-03-03 17:40:55,497 | INFO     | executing command: cat /etc/os-release
[2026-03-03 19:08:09] 2026-03-03 17:40:55,522 | INFO     | cat /etc/os-release:
[2026-03-03 19:08:09] NAME="CentOS Linux"
[2026-03-03 19:08:09] VERSION="7 (Core)"
[2026-03-03 19:08:09] ID="centos"
[2026-03-03 19:08:09] ID_LIKE="rhel fedora"
[2026-03-03 19:08:09] VERSION_ID="7"
[2026-03-03 19:08:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 19:08:09] ANSI_COLOR="0;31"
[2026-03-03 19:08:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 19:08:09] HOME_URL="https://www.centos.org/"
[2026-03-03 19:08:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 19:08:09] 
[2026-03-03 19:08:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 19:08:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 19:08:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 19:08:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 19:08:09] 
[2026-03-03 19:08:09] 2026-03-03 17:40:55,522 | INFO     | **************************************
[2026-03-03 19:08:09] 2026-03-03 17:40:56,025 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-03-03 19:08:09] 2026-03-03 17:40:56,052 | INFO     | sufficient remaining disk space (3317193244672 B)
[2026-03-03 19:08:09] 2026-03-03 17:40:56,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 19:08:09] 2026-03-03 17:40:56,053 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 19:08:09] 2026-03-03 17:40:56,053 | INFO     | update_server=False
[2026-03-03 19:08:09] 2026-03-03 17:40:56,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 19:08:09] 2026-03-03 17:40:56,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:08:09] 2026-03-03 17:40:56,053 | INFO     | aborting loop
[2026-03-03 19:08:09] 2026-03-03 17:40:56,324 | INFO     | all data control threads have been joined
[2026-03-03 19:08:09] 2026-03-03 17:40:56,596 | INFO     | all job control threads have been joined
[2026-03-03 19:08:09] 2026-03-03 17:40:56,938 | INFO     | all payload control threads have been joined
[2026-03-03 19:08:09] 2026-03-03 17:40:57,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 19:08:09] 2026-03-03 17:40:57,058 | INFO     | [job] retrieve thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,058 | INFO     | [job] job monitor thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,329 | INFO     | [data] control thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,441 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,517 | INFO     | [payload] validate_post thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,549 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,602 | INFO     | [job] control thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,628 | INFO     | [payload] failed_post thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:57,943 | INFO     | [payload] control thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:58,014 | INFO     | [data] copytool_in thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:58,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:08:09] 2026-03-03 17:40:58,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 19:08:09] 2026-03-03 17:40:58,497 | INFO     | [job] validate thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:58,527 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:59,046 | INFO     | [data] copytool_out thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:40:59,362 | INFO     | [job] queue monitor thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:41:02,389 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 19:08:09] 2026-03-03 17:41:26,897 | INFO     | PID=3916465 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 19:08:09] 2026-03-03 17:41:26,898 | INFO     | .. there are 18 such processes running
[2026-03-03 19:08:09] 2026-03-03 17:41:26,898 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 19:08:09] 2026-03-03 17:41:26,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 19:08:09] 2026-03-03 17:41:26,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 19:08:09] 2026-03-03 17:41:32,418 | INFO     | [monitor] cgroup control has ended
[2026-03-03 19:08:09] 2026-03-03 17:41:32,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22679162038080)>', '<ExcThread(monitor, started 22678915512064)>']
[2026-03-03 19:08:09] 2026-03-03 17:41:32,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 19:08:09] 2026-03-03 17:41:32,928 | INFO     | [monitor] control thread has ended
[2026-03-03 19:08:09] 2026-03-03 17:41:37,770 | INFO     | all workflow threads have been joined
[2026-03-03 19:08:09] 2026-03-03 17:41:37,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 19:08:09] 2026-03-03 17:41:37,770 | INFO     | traces error code: 0
[2026-03-03 19:08:09] 2026-03-03 17:41:37,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 19:08:09] 2026-03-03 17:41:37,906 [wrapper] ==== pilot stdout END ====
[2026-03-03 19:08:09] 2026-03-03 17:41:37,911 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 19:08:09] 2026-03-03 17:41:37,915 [wrapper] pilotpid: 3916465
[2026-03-03 19:08:09] 2026-03-03 17:41:37,918 [wrapper] Pilot exit status: 0
[2026-03-03 19:08:09] 2026-03-03 17:41:37,933 [wrapper] pandaids: 7034332101
[2026-03-03 19:08:09] 2026-03-03 17:41:38,127 [wrapper] cleanup supervisor_pilot 4075559 3916466
[2026-03-03 19:08:09] 2026-03-03 17:41:38,131 [wrapper] Test setup, not cleaning
[2026-03-03 19:08:09] 2026-03-03 17:41:38,134 [wrapper] apfmon messages muted
[2026-03-03 19:08:09] 2026-03-03 17:41:38,139 [wrapper] ==== wrapper stdout END ====
[2026-03-03 19:08:09] 2026-03-03 17:41:38,143 [wrapper] ==== wrapper stderr END ====
[2026-03-03 19:08:09]  *** Error codes and diagnostics ***
[2026-03-03 19:08:09]     "exeErrorCode": 0,
[2026-03-03 19:08:09]     "exeErrorDiag": "",
[2026-03-03 19:08:09]     "pilotErrorCode": 0,
[2026-03-03 19:08:09]     "pilotErrorDiag": "",
[2026-03-03 19:08:09]  *** Listing of results directory ***
[2026-03-03 19:08:09] total 330084
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc    584627 Mar  1 05:23 pilot3.tar.gz
[2026-03-03 19:08:09] -rwx------ 1 boinc boinc     36322 Mar  1 05:24 runpilot2-wrapper.sh
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc      5111 Mar  1 05:24 queuedata.json
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc       100 Mar  3 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 19:08:09] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 16:29 run_atlas
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc       105 Mar  3 16:29 job.xml
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc      6699 Mar  3 16:29 init_data.xml
[2026-03-03 19:08:09] -rw-r--r-- 2 boinc boinc 190235653 Mar  3 16:29 EVNT.48700904._000051.pool.root.1
[2026-03-03 19:08:09] -rw-r--r-- 2 boinc boinc     15845 Mar  3 16:29 start_atlas.sh
[2026-03-03 19:08:09] drwxrwx--x 2 boinc boinc      4096 Mar  3 16:29 shared
[2026-03-03 19:08:09] -rw-r--r-- 2 boinc boinc    597933 Mar  3 16:29 input.tar.gz
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc         0 Mar  3 16:29 boinc_lockfile
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc      2519 Mar  3 16:29 pandaJob.out
[2026-03-03 19:08:09] -rw------- 1 boinc boinc    998508 Mar  3 16:30 agis_schedconf.cvmfs.json
[2026-03-03 19:08:09] -rw------- 1 boinc boinc   1516104 Mar  3 16:30 agis_ddmendpoints.agis.ALL.json
[2026-03-03 19:08:09] -rw------- 1 boinc boinc       439 Mar  3 16:30 workernode_map.json
[2026-03-03 19:08:09] drwx------ 5 boinc boinc      4096 Mar  3 16:30 pilot3
[2026-03-03 19:08:09] -rw------- 1 boinc boinc 141041744 Mar  3 18:40 HITS.48700906._001257.pool.root.1
[2026-03-03 19:08:09] -rw------- 1 boinc boinc        95 Mar  3 18:40 pilot_heartbeat.json
[2026-03-03 19:08:09] -rw------- 1 boinc boinc      1024 Mar  3 18:40 memory_monitor_summary.json
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc       528 Mar  3 18:40 boinc_task_state.xml
[2026-03-03 19:08:09] -rw------- 1 boinc boinc    302152 Mar  3 18:40 log.48700906._001257.job.log.tgz.1
[2026-03-03 19:08:09] -rw------- 1 boinc boinc      6341 Mar  3 18:40 heartbeat.json
[2026-03-03 19:08:09] -rw------- 1 boinc boinc      4832 Mar  3 18:41 pilotlog.txt
[2026-03-03 19:08:09] -rw------- 1 boinc boinc   1097093 Mar  3 18:41 log.48700906._001257.job.log.1
[2026-03-03 19:08:09] -rw------- 1 boinc boinc       357 Mar  3 18:41 output.list
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc       620 Mar  3 18:41 runtime_log
[2026-03-03 19:08:09] -rw------- 1 boinc boinc   1413120 Mar  3 18:41 result.tar.gz
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc      9204 Mar  3 18:41 runtime_log.err
[2026-03-03 19:08:09] -rw------- 1 boinc boinc       663 Mar  3 18:41 5LNLDm1WnG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwt8KDmYE9Gjn.diag
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc        26 Mar  3 19:07 wrapper_checkpoint.txt
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc      8192 Mar  3 19:08 boinc_mmap_file
[2026-03-03 19:08:09] -rw-r--r-- 1 boinc boinc     21114 Mar  3 19:08 stderr.txt
[2026-03-03 19:08:09] HITS file was successfully produced:
[2026-03-03 19:08:09] -rw------- 1 boinc boinc 141041744 Mar  3 18:40 shared/HITS.pool.root.1
[2026-03-03 19:08:09]  *** Contents of shared directory: ***
[2026-03-03 19:08:09] total 325508
[2026-03-03 19:08:09] -rw-r--r-- 2 boinc boinc 190235653 Mar  3 16:29 ATLAS.root_0
[2026-03-03 19:08:09] -rw-r--r-- 2 boinc boinc     15845 Mar  3 16:29 start_atlas.sh
[2026-03-03 19:08:09] -rw-r--r-- 2 boinc boinc    597933 Mar  3 16:29 input.tar.gz
[2026-03-03 19:08:09] -rw------- 1 boinc boinc 141041744 Mar  3 18:40 HITS.pool.root.1
[2026-03-03 19:08:09] -rw------- 1 boinc boinc   1413120 Mar  3 18:41 result.tar.gz
19:08:12 (3908564): run_atlas exited; CPU time 30032.273170
19:08:12 (3908564): called boinc_finish(0)

</stderr_txt>
]]>

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