Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:11:24 (3849957): wrapper (7.7.26015): starting
14:11:24 (3849957): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 14:11:24] Arguments: --nthreads 4
[2026-03-01 14:11:24] Threads: 4
[2026-03-01 14:11:24] Checking for CVMFS
[2026-03-01 14:11:24] No cvmfs_config command found, will try listing directly
[2026-03-01 14:11:24] CVMFS is ok
[2026-03-01 14:11:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 14:11:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 14:11:24] Further information can be found at the LHC@home message board.
[2026-03-01 14:11:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 14:11:24] Checking for apptainer binary...
[2026-03-01 14:11:24] which: no apptainer in ((null))
[2026-03-01 14:11:24] apptainer is not installed, using version from CVMFS
[2026-03-01 14:11:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 14:11:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-01 14:11:24] apptainer works
[2026-03-01 14:11:24] Set ATHENA_PROC_NUMBER=4
[2026-03-01 14:11:24] Set ATHENA_CORE_NUMBER=4
[2026-03-01 14:11:24] Starting ATLAS job with PandaID=7034328372
[2026-03-01 14:11:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 15:17:57]  *** The last 200 lines of the pilot log: ***
[2026-03-01 15:17:57] 2026-03-01 14:17:14,962 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/log.48700858._000544.job.log.tgz.1 /var/lib/boinc/var/slot244/slots/0/
[2026-03-01 15:17:57] 2026-03-01 14:17:14,978 | INFO     | adding to output.list: log.48700858._000544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/07/log.48700858._000544.job.log.tg
[2026-03-01 15:17:57] 2026-03-01 14:17:14,978 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 15:17:57] 2026-03-01 14:17:14,978 | INFO     | summary of transferred files:
[2026-03-01 15:17:57] 2026-03-01 14:17:14,979 | INFO     |  -- lfn=log.48700858._000544.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 15:17:57] 2026-03-01 14:17:14,979 | INFO     | stage-out finished correctly
[2026-03-01 15:17:57] 2026-03-01 14:17:15,229 | INFO     | time since job start (3930s) is within the limit (349056.0s)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,249 | WARNING  | process 3861018 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 15:17:57] 2026-03-01 14:17:15,249 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,250 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,250 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-01 15:17:57] 2026-03-01 14:17:15,250 | WARNING  | maxPSS not found in memory monitor output
[2026-03-01 15:17:57] 2026-03-01 14:17:15,250 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2636073 B
[2026-03-01 15:17:57] 2026-03-01 14:17:15,250 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15843 B
[2026-03-01 15:17:57] 2026-03-01 14:17:15,251 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-01 15:17:57] 2026-03-01 14:17:15,268 | INFO     | sufficient remaining disk space (110060634112 B)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,268 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,269 | INFO     | size of work directory /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372: 2930511 B (within 5033164800 B limit)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,272 | INFO     | pfn file=/var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/HITS.48700858._000544.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,272 | INFO     | total size of present files: 0 B (workdir size: 2930511 B)
[2026-03-01 15:17:57] 2026-03-01 14:17:15,272 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/HITS.48700858._000544.pool.root.1 since it does not exist
[2026-03-01 15:17:57] 2026-03-01 14:17:15,745 | INFO     | number of running child processes to parent process 3861018: 1
[2026-03-01 15:17:57] 2026-03-01 14:17:15,745 | INFO     | maximum number of monitored processes: 6
[2026-03-01 15:17:57] 2026-03-01 14:17:16,781 | INFO     | PID=3854837 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 15:17:57] 2026-03-01 14:17:16,781 | INFO     | .. there are 49 such processes running
[2026-03-01 15:17:57] 2026-03-01 14:17:17,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 15:17:57] 2026-03-01 14:17:17,378 | INFO     | job 7034328372 has state=finished
[2026-03-01 15:17:57] 2026-03-01 14:17:17,378 | INFO     | preparing for final server update for job 7034328372 in state='finished'
[2026-03-01 15:17:57] 2026-03-01 14:17:17,782 | INFO     | time since job start (3932s) is within the limit (349056.0s)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,959 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,959 | INFO     | reading metadata from: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/jobReport.json
[2026-03-01 15:17:57] 2026-03-01 14:17:17,960 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot244/slots/0/workernode_map.json
[2026-03-01 15:17:57] 2026-03-01 14:17:17,961 | INFO     | this job has now completed (state=finished)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,961 | INFO     | log transfer has been attempted: DONE
[2026-03-01 15:17:57] 2026-03-01 14:17:17,961 | INFO     | job 7034328372 has finished - writing final server update
[2026-03-01 15:17:57] 2026-03-01 14:17:17,961 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18331/.job.ad'
[2026-03-01 15:17:57] 2026-03-01 14:17:17,961 | INFO     | total number of processed events: 400 (read)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,983 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7034328372/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,983 | INFO     | extracted standard info from prmon json
[2026-03-01 15:17:57] 2026-03-01 14:17:17,984 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 15:17:57] 2026-03-01 14:17:17,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 15:17:57] 2026-03-01 14:17:17,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 15:17:57] 2026-03-01 14:17:17,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 15:17:57] 2026-03-01 14:17:17,985 | INFO     | fitting pss+swap vs Time
[2026-03-01 15:17:57] 2026-03-01 14:17:17,985 | INFO     | sum of square deviations: 57407588.0
[2026-03-01 15:17:57] 2026-03-01 14:17:17,985 | INFO     | sum of deviations: 209995367.00000003
[2026-03-01 15:17:57] 2026-03-01 14:17:17,985 | INFO     | mean x: 1772372742.0
[2026-03-01 15:17:57] 2026-03-01 14:17:17,985 | INFO     | mean y: 2317390.6140350876
[2026-03-01 15:17:57] 2026-03-01 14:17:17,985 | INFO     | intersect: -6480973013.732624
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | chi2: 0.00011378758090313373
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | current memory leak: 3.66 B/s (using 57 data points, chi2=0.00)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | could have reported an average CPU frequency of 3562 MHz (6 samples)
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | ..............................
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . Timing measurements:
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . get job = 0 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . initial setup = 9 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . payload setup = 6 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . stage-in = 0 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . payload execution = 3907 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . stage-out = 0 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | . log creation = 0 s
[2026-03-01 15:17:57] 2026-03-01 14:17:17,986 | INFO     | ..............................
[2026-03-01 15:17:57] 2026-03-01 14:17:18,239 | INFO     | 
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | job summary report
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | --------------------------------------------------
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | PanDA job id: 7034328372
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | task id: 48700858
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | errors: (none)
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | pilot state: finished 
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | transexitcode: 0
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | exeerrorcode: 0
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | exeerrordiag: 
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | exitcode: 0
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | exitmsg: OK
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | cpuconsumptiontime: 14808 s
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | nevents: 400
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | neventsw: 0
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | pid: 3861018
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | pgrp: 3861018
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | corecount: 4
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | event service: False
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | sizes: {0: 2281121, 1: 2282251, 11: 2282251, 3917: 2308110, 3919: 2317132, 3921: 2317216, 3922: 2317538}
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | --------------------------------------------------
[2026-03-01 15:17:57] 2026-03-01 14:17:18,240 | INFO     | 
[2026-03-01 15:17:57] 2026-03-01 14:17:18,241 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-01 15:17:57] 2026-03-01 14:17:18,262 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,262 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | job 7034328372 has completed (purged errors)
[2026-03-01 15:17:57] 2026-03-01 14:17:18,263 | INFO     | overall cleanup function is called
[2026-03-01 15:17:57] 2026-03-01 14:17:19,269 | INFO     | --- collectZombieJob: --- 10, [3861018]
[2026-03-01 15:17:57] 2026-03-01 14:17:19,270 | INFO     | zombie collector waiting for pid 3861018
[2026-03-01 15:17:57] 2026-03-01 14:17:19,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 15:17:57] 2026-03-01 14:17:19,270 | INFO     | collected zombie processes
[2026-03-01 15:17:57] 2026-03-01 14:17:19,270 | INFO     | will attempt to kill all subprocesses of pid=3861018
[2026-03-01 15:17:57] 2026-03-01 14:17:19,729 | INFO     | process IDs to be killed: [3861018] (in reverse order)
[2026-03-01 15:17:57] 2026-03-01 14:17:19,952 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 15:17:57] 2026-03-01 14:17:19,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 15:17:57] 2026-03-01 14:17:19,985 | INFO     | did not find any defunct processes belonging to 3861018
[2026-03-01 15:17:57] 2026-03-01 14:17:20,015 | INFO     | did not find any defunct processes belonging to 3861018
[2026-03-01 15:17:57] 2026-03-01 14:17:20,016 | INFO     | ready for new job
[2026-03-01 15:17:57] 2026-03-01 14:17:20,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 15:17:57] 2026-03-01 14:17:20,017 | INFO     | **************************************
[2026-03-01 15:17:57] 2026-03-01 14:17:20,017 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 15:17:57] 2026-03-01 14:17:20,017 | INFO     | **************************************
[2026-03-01 15:17:57] 2026-03-01 14:17:20,017 | INFO     | 
[2026-03-01 15:17:57] 2026-03-01 14:17:20,023 | INFO     | architecture information:
[2026-03-01 15:17:57] 2026-03-01 14:17:20,024 | INFO     | executing command: cat /etc/os-release
[2026-03-01 15:17:57] 2026-03-01 14:17:20,039 | INFO     | cat /etc/os-release:
[2026-03-01 15:17:57] NAME="CentOS Linux"
[2026-03-01 15:17:57] VERSION="7 (Core)"
[2026-03-01 15:17:57] ID="centos"
[2026-03-01 15:17:57] ID_LIKE="rhel fedora"
[2026-03-01 15:17:57] VERSION_ID="7"
[2026-03-01 15:17:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 15:17:57] ANSI_COLOR="0;31"
[2026-03-01 15:17:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 15:17:57] HOME_URL="https://www.centos.org/"
[2026-03-01 15:17:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 15:17:57] 
[2026-03-01 15:17:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 15:17:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 15:17:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 15:17:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 15:17:57] 
[2026-03-01 15:17:57] 2026-03-01 14:17:20,039 | INFO     | **************************************
[2026-03-01 15:17:57] 2026-03-01 14:17:20,542 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-01 15:17:57] 2026-03-01 14:17:20,557 | INFO     | sufficient remaining disk space (110041759744 B)
[2026-03-01 15:17:57] 2026-03-01 14:17:20,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 15:17:57] 2026-03-01 14:17:20,557 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 15:17:57] 2026-03-01 14:17:20,557 | INFO     | update_server=False
[2026-03-01 15:17:57] 2026-03-01 14:17:20,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 15:17:57] 2026-03-01 14:17:20,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 15:17:57] 2026-03-01 14:17:20,673 | INFO     | all data control threads have been joined
[2026-03-01 15:17:57] 2026-03-01 14:17:20,751 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 15:17:57] 2026-03-01 14:17:20,752 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 15:17:57] 2026-03-01 14:17:20,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 15:17:57] 2026-03-01 14:17:20,752 | INFO     | will abort loop
[2026-03-01 15:17:57] 2026-03-01 14:17:20,778 | INFO     | all job control threads have been joined
[2026-03-01 15:17:57] 2026-03-01 14:17:21,102 | INFO     | all payload control threads have been joined
[2026-03-01 15:17:57] 2026-03-01 14:17:21,558 | INFO     | [job] retrieve thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:21,678 | INFO     | [data] control thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:21,757 | INFO     | [job] job monitor thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:21,784 | INFO     | [job] control thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,108 | INFO     | [payload] control thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,221 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,332 | INFO     | [job] validate thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,370 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,390 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,562 | INFO     | [data] copytool_out thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,651 | INFO     | [data] copytool_in thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,768 | INFO     | [payload] validate_post thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:22,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:23,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 15:17:57] 2026-03-01 14:17:23,121 | INFO     | [payload] failed_post thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:23,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 15:17:57] 2026-03-01 14:17:24,053 | INFO     | [job] queue monitor thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:27,390 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 15:17:57] 2026-03-01 14:17:51,438 | INFO     | PID=3854837 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 15:17:57] 2026-03-01 14:17:51,438 | INFO     | .. there are 49 such processes running
[2026-03-01 15:17:57] 2026-03-01 14:17:51,438 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 15:17:57] 2026-03-01 14:17:51,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 15:17:57] 2026-03-01 14:17:51,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 15:17:57] 2026-03-01 14:17:51,720 | INFO     | [monitor] cgroup control has ended
[2026-03-01 15:17:57] 2026-03-01 14:17:52,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22966983153472)>', '<ExcThread(monitor, started 22966743344896)>']
[2026-03-01 15:17:57] 2026-03-01 14:17:52,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 15:17:57] 2026-03-01 14:17:52,444 | INFO     | [monitor] control thread has ended
[2026-03-01 15:17:57] 2026-03-01 14:17:57,263 | INFO     | all workflow threads have been joined
[2026-03-01 15:17:57] 2026-03-01 14:17:57,263 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 15:17:57] 2026-03-01 14:17:57,263 | INFO     | traces error code: 0
[2026-03-01 15:17:57] 2026-03-01 14:17:57,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 15:17:57] 2026-03-01 14:17:57,492 [wrapper] ==== pilot stdout END ====
[2026-03-01 15:17:57] 2026-03-01 14:17:57,495 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 15:17:57] 2026-03-01 14:17:57,498 [wrapper] pilotpid: 3854837
[2026-03-01 15:17:57] 2026-03-01 14:17:57,500 [wrapper] Pilot exit status: 0
[2026-03-01 15:17:57] 2026-03-01 14:17:57,508 [wrapper] pandaids: 7034328372
[2026-03-01 15:17:57] 2026-03-01 14:17:57,633 [wrapper] cleanup supervisor_pilot  320399 3854838
[2026-03-01 15:17:57] 2026-03-01 14:17:57,636 [wrapper] Test setup, not cleaning
[2026-03-01 15:17:57] 2026-03-01 14:17:57,638 [wrapper] apfmon messages muted
[2026-03-01 15:17:57] 2026-03-01 14:17:57,640 [wrapper] ==== wrapper stdout END ====
[2026-03-01 15:17:57] 2026-03-01 14:17:57,641 [wrapper] ==== wrapper stderr END ====
[2026-03-01 15:17:57]  *** Error codes and diagnostics ***
[2026-03-01 15:17:57]     "exeErrorCode": 0,
[2026-03-01 15:17:57]     "exeErrorDiag": "",
[2026-03-01 15:17:57]     "pilotErrorCode": 0,
[2026-03-01 15:17:57]     "pilotErrorDiag": "",
[2026-03-01 15:17:57]  *** Listing of results directory ***
[2026-03-01 15:17:57] total 332908
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc    584627 Mar  1 05:23 pilot3.tar.gz
[2026-03-01 15:17:57] -rwx------. 1 boinc boinc     36322 Mar  1 05:24 runpilot2-wrapper.sh
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc      5111 Mar  1 05:24 queuedata.json
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc       100 Mar  1 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 15:17:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 14:11 run_atlas
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc       105 Mar  1 14:11 job.xml
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc      6703 Mar  1 14:11 init_data.xml
[2026-03-01 15:17:57] -rw-r--r--. 2 boinc boinc 190271920 Mar  1 14:11 EVNT.48700856._000024.pool.root.1
[2026-03-01 15:17:57] -rw-r--r--. 2 boinc boinc     15845 Mar  1 14:11 start_atlas.sh
[2026-03-01 15:17:57] drwxrwx--x. 2 boinc boinc      4096 Mar  1 14:11 shared
[2026-03-01 15:17:57] -rw-r--r--. 2 boinc boinc    597940 Mar  1 14:11 input.tar.gz
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc         0 Mar  1 14:11 boinc_lockfile
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc      2518 Mar  1 14:11 pandaJob.out
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc    998184 Mar  1 14:11 agis_schedconf.cvmfs.json
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc   1513015 Mar  1 14:11 agis_ddmendpoints.agis.ALL.json
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc       444 Mar  1 14:11 workernode_map.json
[2026-03-01 15:17:57] drwx------. 5 boinc boinc      4096 Mar  1 14:11 pilot3
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc 144991230 Mar  1 15:16 HITS.48700858._000544.pool.root.1
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc       529 Mar  1 15:16 boinc_task_state.xml
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc        95 Mar  1 15:16 pilot_heartbeat.json
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc      1032 Mar  1 15:17 memory_monitor_summary.json
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc    263394 Mar  1 15:17 log.48700858._000544.job.log.tgz.1
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc      6346 Mar  1 15:17 heartbeat.json
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc      8192 Mar  1 15:17 boinc_mmap_file
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc        27 Mar  1 15:17 wrapper_checkpoint.txt
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc      5017 Mar  1 15:17 pilotlog.txt
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc    587537 Mar  1 15:17 log.48700858._000544.job.log.1
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc       357 Mar  1 15:17 output.list
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc       620 Mar  1 15:17 runtime_log
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc    870400 Mar  1 15:17 result.tar.gz
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc      9221 Mar  1 15:17 runtime_log.err
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc       661 Mar  1 15:17 2xbNDm0WnG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm666KDmNW4Iwm.diag
[2026-03-01 15:17:57] -rw-r--r--. 1 boinc boinc     22688 Mar  1 15:17 stderr.txt
[2026-03-01 15:17:57] HITS file was successfully produced:
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc 144991230 Mar  1 15:16 shared/HITS.pool.root.1
[2026-03-01 15:17:57]  *** Contents of shared directory: ***
[2026-03-01 15:17:57] total 328868
[2026-03-01 15:17:57] -rw-r--r--. 2 boinc boinc 190271920 Mar  1 14:11 ATLAS.root_0
[2026-03-01 15:17:57] -rw-r--r--. 2 boinc boinc     15845 Mar  1 14:11 start_atlas.sh
[2026-03-01 15:17:57] -rw-r--r--. 2 boinc boinc    597940 Mar  1 14:11 input.tar.gz
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc 144991230 Mar  1 15:16 HITS.pool.root.1
[2026-03-01 15:17:57] -rw-------. 1 boinc boinc    870400 Mar  1 15:17 result.tar.gz
15:17:58 (3849957): run_atlas exited; CPU time 14983.249825
15:17:58 (3849957): called boinc_finish(0)

</stderr_txt>
]]>

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