Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:57:49 (3095696): wrapper (7.7.26015): starting
07:57:49 (3095696): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 07:57:49] Arguments: --nthreads 12
[2026-03-04 07:57:49] Threads: 12
[2026-03-04 07:57:49] Checking for CVMFS
[2026-03-04 07:57:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 07:57:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 07:57:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 07:57:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 07:57:51] 2.13.3.0 4052807 1577 75296 156874 0 188 3537483 4096000 15836 130560 0 10616018 99.999 60794 1630 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-04 07:57:51] CVMFS is ok
[2026-03-04 07:57:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:57:51] Checking for apptainer binary...
[2026-03-04 07:57:51] apptainer is not installed, using version from CVMFS
[2026-03-04 07:57:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:57:53] epyc7v12
[2026-03-04 07:57:53] apptainer works
[2026-03-04 07:57:53] Set ATHENA_PROC_NUMBER=12
[2026-03-04 07:57:53] Set ATHENA_CORE_NUMBER=12
[2026-03-04 07:57:53] Starting ATLAS job with PandaID=7033638872
[2026-03-04 07:57:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 10:21:55]  *** The last 200 lines of the pilot log: ***
[2026-03-04 10:21:55] 2026-03-04 10:20:48,521 | INFO     | log transfer has been attempted: DONE
[2026-03-04 10:21:55] 2026-03-04 10:20:48,521 | INFO     | job 7033638872 has finished - writing final server update
[2026-03-04 10:21:55] 2026-03-04 10:20:48,521 | INFO     | total number of processed events: 400 (read)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,548 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-7033638872/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,549 | INFO     | extracted standard info from prmon json
[2026-03-04 10:21:55] 2026-03-04 10:20:48,549 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 10:21:55] 2026-03-04 10:20:48,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 10:21:55] 2026-03-04 10:20:48,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 10:21:55] 2026-03-04 10:20:48,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 10:21:55] 2026-03-04 10:20:48,553 | INFO     | fitting pss+swap vs Time
[2026-03-04 10:21:55] 2026-03-04 10:20:48,553 | INFO     | sum of square deviations: 850825255.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,554 | INFO     | sum of deviations: 34281843901.000008
[2026-03-04 10:21:55] 2026-03-04 10:20:48,554 | INFO     | mean x: 1772615396.5
[2026-03-04 10:21:55] 2026-03-04 10:20:48,555 | INFO     | mean y: 2633913.242857143
[2026-03-04 10:21:55] 2026-03-04 10:20:48,555 | INFO     | intersect: -71420403851.8059
[2026-03-04 10:21:55] 2026-03-04 10:20:48,555 | INFO     | chi2: 2.7775948682942584
[2026-03-04 10:21:55] 2026-03-04 10:20:48,555 | INFO     | sum of square deviations: 762879420.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,556 | INFO     | sum of deviations: 42903444882.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,556 | INFO     | mean x: 1772615244.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,556 | INFO     | mean y: 2648348.8518518517
[2026-03-04 10:21:55] 2026-03-04 10:20:48,556 | INFO     | intersect: -99687156388.5036
[2026-03-04 10:21:55] 2026-03-04 10:20:48,557 | INFO     | chi2: 1.9748569755950949
[2026-03-04 10:21:55] 2026-03-04 10:20:48,557 | INFO     | current chi2=1.9748569755950949 (change=28.90046715819758 %)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,557 | INFO     | sum of square deviations: 681212772.5
[2026-03-04 10:21:55] 2026-03-04 10:20:48,558 | INFO     | sum of deviations: 41086918470.50001
[2026-03-04 10:21:55] 2026-03-04 10:20:48,558 | INFO     | mean x: 1772615091.5
[2026-03-04 10:21:55] 2026-03-04 10:20:48,558 | INFO     | mean y: 2644955.5615384616
[2026-03-04 10:21:55] 2026-03-04 10:20:48,558 | INFO     | intersect: -106911515618.31175
[2026-03-04 10:21:55] 2026-03-04 10:20:48,559 | INFO     | chi2: 1.972289590929022
[2026-03-04 10:21:55] 2026-03-04 10:20:48,559 | INFO     | current chi2=1.972289590929022 (change=0.1300035748309994 %)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,559 | INFO     | right removable region: 129
[2026-03-04 10:21:55] 2026-03-04 10:20:48,559 | INFO     | sum of square deviations: 762879420.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,560 | INFO     | sum of deviations: 4509000745.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,560 | INFO     | mean x: 1772615549.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,560 | INFO     | mean y: 2685043.4296296295
[2026-03-04 10:21:55] 2026-03-04 10:20:48,560 | INFO     | intersect: -10474363650.634739
[2026-03-04 10:21:55] 2026-03-04 10:20:48,561 | INFO     | chi2: 0.9810292492383628
[2026-03-04 10:21:55] 2026-03-04 10:20:48,561 | INFO     | current chi2=0.9810292492383628 (change=64.68062133766757 %)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,561 | INFO     | sum of square deviations: 681212772.5
[2026-03-04 10:21:55] 2026-03-04 10:20:48,562 | INFO     | sum of deviations: -4786371465.999998
[2026-03-04 10:21:55] 2026-03-04 10:20:48,562 | INFO     | mean x: 1772615701.5
[2026-03-04 10:21:55] 2026-03-04 10:20:48,562 | INFO     | mean y: 2702308.8307692306
[2026-03-04 10:21:55] 2026-03-04 10:20:48,562 | INFO     | intersect: 12457543962.351248
[2026-03-04 10:21:55] 2026-03-04 10:20:48,563 | INFO     | chi2: 0.8316629091309234
[2026-03-04 10:21:55] 2026-03-04 10:20:48,563 | INFO     | current chi2=0.8316629091309234 (change=15.225472657762468 %)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,563 | INFO     | left removable region: 20
[2026-03-04 10:21:55] 2026-03-04 10:20:48,563 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,564 | INFO     | sum of deviations: 2300655321.0000005
[2026-03-04 10:21:55] 2026-03-04 10:20:48,564 | INFO     | mean x: 1772615671.0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,564 | INFO     | mean y: 2724624.3027522936
[2026-03-04 10:21:55] 2026-03-04 10:20:48,564 | INFO     | intersect: -10153791921.927113
[2026-03-04 10:21:55] 2026-03-04 10:20:48,564 | INFO     | chi2: 0.00029405891082804676
[2026-03-04 10:21:55] 2026-03-04 10:20:48,564 | INFO     | current memory leak: 5.73 B/s (using 109 data points, chi2=0.00)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,565 | INFO     | could have reported an average CPU frequency of 2398 MHz (8 samples)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,565 | INFO     | ..............................
[2026-03-04 10:21:55] 2026-03-04 10:20:48,565 | INFO     | . Timing measurements:
[2026-03-04 10:21:55] 2026-03-04 10:20:48,565 | INFO     | . get job = 0 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,565 | INFO     | . initial setup = 15 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,565 | INFO     | . payload setup = 16 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,566 | INFO     | . stage-in = 0 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,566 | INFO     | . payload execution = 8496 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,566 | INFO     | . stage-out = 1 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,566 | INFO     | . log creation = 0 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,566 | INFO     | ..............................
[2026-03-04 10:21:55] 2026-03-04 10:20:48,936 | INFO     | 
[2026-03-04 10:21:55] 2026-03-04 10:20:48,936 | INFO     | job summary report
[2026-03-04 10:21:55] 2026-03-04 10:20:48,936 | INFO     | --------------------------------------------------
[2026-03-04 10:21:55] 2026-03-04 10:20:48,936 | INFO     | PanDA job id: 7033638872
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | task id: 48838581
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | errors: (none)
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | pilot state: finished 
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | transexitcode: 0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | exeerrorcode: 0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | exeerrordiag: 
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | exitcode: 0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | exitmsg: OK
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | cpuconsumptiontime: 56853 s
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | nevents: 400
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | neventsw: 0
[2026-03-04 10:21:55] 2026-03-04 10:20:48,937 | INFO     | pid: 3107000
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | pgrp: 3107000
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | corecount: 12
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | event service: False
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | sizes: {0: 2286633, 1: 2251745, 2: 2287178, 12: 2287178, 8516: 2315512, 8517: 2315511, 8519: 2324739, 8521: 2324795, 8522: 2324989}
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | --------------------------------------------------
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | 
[2026-03-04 10:21:55] 2026-03-04 10:20:48,938 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-03-04 10:21:55] 2026-03-04 10:20:49,000 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,000 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,004 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 10:21:55] 2026-03-04 10:20:49,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,004 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 10:21:55] 2026-03-04 10:20:49,004 | INFO     | job 7033638872 has completed (purged errors)
[2026-03-04 10:21:55] 2026-03-04 10:20:49,005 | INFO     | overall cleanup function is called
[2026-03-04 10:21:55] 2026-03-04 10:20:50,020 | INFO     | --- collectZombieJob: --- 10, [3107000]
[2026-03-04 10:21:55] 2026-03-04 10:20:50,020 | INFO     | zombie collector waiting for pid 3107000
[2026-03-04 10:21:55] 2026-03-04 10:20:50,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 10:21:55] 2026-03-04 10:20:50,021 | INFO     | collected zombie processes
[2026-03-04 10:21:55] 2026-03-04 10:20:50,021 | INFO     | will attempt to kill all subprocesses of pid=3107000
[2026-03-04 10:21:55] 2026-03-04 10:20:51,228 | INFO     | process IDs to be killed: [3107000] (in reverse order)
[2026-03-04 10:21:55] 2026-03-04 10:20:51,704 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 10:21:55] 2026-03-04 10:20:51,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 10:21:55] 2026-03-04 10:20:51,738 | INFO     | did not find any defunct processes belonging to 3107000
[2026-03-04 10:21:55] 2026-03-04 10:20:51,784 | INFO     | did not find any defunct processes belonging to 3107000
[2026-03-04 10:21:55] 2026-03-04 10:20:51,785 | INFO     | ready for new job
[2026-03-04 10:21:55] 2026-03-04 10:20:51,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 10:21:55] 2026-03-04 10:20:51,790 | INFO     | **************************************
[2026-03-04 10:21:55] 2026-03-04 10:20:51,790 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 10:21:55] 2026-03-04 10:20:51,790 | INFO     | **************************************
[2026-03-04 10:21:55] 2026-03-04 10:20:51,790 | INFO     | 
[2026-03-04 10:21:55] 2026-03-04 10:20:51,808 | INFO     | architecture information:
[2026-03-04 10:21:55] 2026-03-04 10:20:51,816 | INFO     | executing command: cat /etc/os-release
[2026-03-04 10:21:55] 2026-03-04 10:20:51,859 | INFO     | cat /etc/os-release:
[2026-03-04 10:21:55] NAME="CentOS Linux"
[2026-03-04 10:21:55] VERSION="7 (Core)"
[2026-03-04 10:21:55] ID="centos"
[2026-03-04 10:21:55] ID_LIKE="rhel fedora"
[2026-03-04 10:21:55] VERSION_ID="7"
[2026-03-04 10:21:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 10:21:55] ANSI_COLOR="0;31"
[2026-03-04 10:21:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 10:21:55] HOME_URL="https://www.centos.org/"
[2026-03-04 10:21:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 10:21:55] 
[2026-03-04 10:21:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 10:21:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 10:21:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 10:21:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 10:21:55] 
[2026-03-04 10:21:55] 2026-03-04 10:20:51,860 | INFO     | **************************************
[2026-03-04 10:21:55] 2026-03-04 10:20:52,362 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-03-04 10:21:55] 2026-03-04 10:20:52,415 | INFO     | sufficient remaining disk space (234844323840 B)
[2026-03-04 10:21:55] 2026-03-04 10:20:52,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 10:21:55] 2026-03-04 10:20:52,415 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 10:21:55] 2026-03-04 10:20:52,415 | INFO     | update_server=False
[2026-03-04 10:21:55] 2026-03-04 10:20:52,416 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 10:21:55] 2026-03-04 10:20:52,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:21:55] 2026-03-04 10:20:52,416 | INFO     | aborting loop
[2026-03-04 10:21:55] 2026-03-04 10:20:53,316 | INFO     | all job control threads have been joined
[2026-03-04 10:21:55] 2026-03-04 10:20:53,381 | INFO     | all data control threads have been joined
[2026-03-04 10:21:55] 2026-03-04 10:20:53,421 | INFO     | [job] retrieve thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:53,423 | INFO     | [job] job monitor thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:53,454 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:53,485 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:53,718 | INFO     | all payload control threads have been joined
[2026-03-04 10:21:55] 2026-03-04 10:20:53,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:21:55] 2026-03-04 10:20:53,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 10:21:55] 2026-03-04 10:20:53,946 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,171 | INFO     | [payload] failed_post thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,321 | INFO     | [job] control thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,343 | INFO     | [payload] validate_post thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,386 | INFO     | [data] control thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,408 | INFO     | [data] copytool_in thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 10:21:55] 2026-03-04 10:20:54,570 | INFO     | [job] validate thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,723 | INFO     | [payload] control thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:54,751 | INFO     | [job] queue monitor thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:55,812 | INFO     | [data] copytool_out thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:20:58,531 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:21:03,283 | INFO     | job.realtimelogging is not enabled
[2026-03-04 10:21:55] 2026-03-04 10:21:04,288 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 10:21:55] 2026-03-04 10:21:21,879 | INFO     | PID=3099922 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 10:21:55] 2026-03-04 10:21:21,880 | INFO     | .. there are 19 such processes running
[2026-03-04 10:21:55] 2026-03-04 10:21:21,881 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 10:21:55] 2026-03-04 10:21:21,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 10:21:55] 2026-03-04 10:21:21,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 10:21:55] 2026-03-04 10:21:48,874 | INFO     | [monitor] cgroup control has ended
[2026-03-04 10:21:55] 2026-03-04 10:21:49,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125402456385344)>', '<ExcThread(monitor, started 125401695250176)>']
[2026-03-04 10:21:55] 2026-03-04 10:21:50,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 10:21:55] 2026-03-04 10:21:50,031 | INFO     | [monitor] control thread has ended
[2026-03-04 10:21:55] 2026-03-04 10:21:54,510 | INFO     | all workflow threads have been joined
[2026-03-04 10:21:55] 2026-03-04 10:21:54,510 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 10:21:55] 2026-03-04 10:21:54,510 | INFO     | traces error code: 0
[2026-03-04 10:21:55] 2026-03-04 10:21:54,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 10:21:55] 2026-03-04 10:21:54,873 [wrapper] ==== pilot stdout END ====
[2026-03-04 10:21:55] 2026-03-04 10:21:54,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 10:21:55] 2026-03-04 10:21:54,889 [wrapper] pilotpid: 3099922
[2026-03-04 10:21:55] 2026-03-04 10:21:54,899 [wrapper] Pilot exit status: 0
[2026-03-04 10:21:55] 2026-03-04 10:21:54,925 [wrapper] pandaids: 7033638872
[2026-03-04 10:21:55] 2026-03-04 10:21:55,166 [wrapper] cleanup supervisor_pilot 3385544 3099923
[2026-03-04 10:21:55] 2026-03-04 10:21:55,176 [wrapper] Test setup, not cleaning
[2026-03-04 10:21:55] 2026-03-04 10:21:55,182 [wrapper] apfmon messages muted
[2026-03-04 10:21:55] 2026-03-04 10:21:55,189 [wrapper] ==== wrapper stdout END ====
[2026-03-04 10:21:55] 2026-03-04 10:21:55,198 [wrapper] ==== wrapper stderr END ====
[2026-03-04 10:21:55]  *** Error codes and diagnostics ***
[2026-03-04 10:21:55]     "exeErrorCode": 0,
[2026-03-04 10:21:55]     "exeErrorDiag": "",
[2026-03-04 10:21:55]     "pilotErrorCode": 0,
[2026-03-04 10:21:55]     "pilotErrorDiag": "",
[2026-03-04 10:21:55]  *** Listing of results directory ***
[2026-03-04 10:21:55] total 517436
[2026-03-04 10:21:55] -rw-r--r-- 1 boinc boinc    584627 Feb 28 18:22 pilot3.tar.gz
[2026-03-04 10:21:55] -rw-r--r-- 1 boinc boinc      5111 Feb 28 18:23 queuedata.json
[2026-03-04 10:21:55] -rwx------ 1 boinc boinc     36322 Feb 28 18:23 runpilot2-wrapper.sh
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc       100 Mar  4 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 10:21:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 07:57 run_atlas
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc       105 Mar  4 07:57 job.xml
[2026-03-04 10:21:55] -rw-r--r-- 2 boinc boinc 289922443 Mar  4 07:57 EVNT.48220205._000117.pool.root.1
[2026-03-04 10:21:55] drwxrwx--x 2 boinc boinc      4096 Mar  4 07:57 shared
[2026-03-04 10:21:55] -rw-r--r-- 2 boinc boinc    597976 Mar  4 07:57 input.tar.gz
[2026-03-04 10:21:55] -rw-r--r-- 2 boinc boinc     15845 Mar  4 07:57 start_atlas.sh
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc      7048 Mar  4 07:57 init_data.xml
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc         0 Mar  4 07:57 boinc_setup_complete
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc         0 Mar  4 07:57 boinc_lockfile
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc      2588 Mar  4 07:57 pandaJob.out
[2026-03-04 10:21:55] -rw------- 1 boinc boinc    997360 Mar  4 07:58 agis_schedconf.cvmfs.json
[2026-03-04 10:21:55] -rw------- 1 boinc boinc   1516092 Mar  4 07:58 agis_ddmendpoints.agis.ALL.json
[2026-03-04 10:21:55] -rw------- 1 boinc boinc       420 Mar  4 07:58 workernode_map.json
[2026-03-04 10:21:55] drwx------ 5 boinc boinc      4096 Mar  4 07:58 pilot3
[2026-03-04 10:21:55] -rw------- 1 boinc boinc 232742840 Mar  4 10:19 HITS.48838581._002667.pool.root.1
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc       530 Mar  4 10:19 boinc_task_state.xml
[2026-03-04 10:21:55] -rw------- 1 boinc boinc      1023 Mar  4 10:20 memory_monitor_summary.json
[2026-03-04 10:21:55] -rw------- 1 boinc boinc    442364 Mar  4 10:20 log.48838581._002667.job.log.tgz.1
[2026-03-04 10:21:55] -rw------- 1 boinc boinc      6288 Mar  4 10:20 heartbeat.json
[2026-03-04 10:21:55] -rw------- 1 boinc boinc        95 Mar  4 10:21 pilot_heartbeat.json
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc      8192 Mar  4 10:21 boinc_mmap_file
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc        27 Mar  4 10:21 wrapper_checkpoint.txt
[2026-03-04 10:21:55] -rw------- 1 boinc boinc      4916 Mar  4 10:21 pilotlog.txt
[2026-03-04 10:21:55] -rw------- 1 boinc boinc   1183860 Mar  4 10:21 log.48838581._002667.job.log.1
[2026-03-04 10:21:55] -rw------- 1 boinc boinc       357 Mar  4 10:21 output.list
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc       620 Mar  4 10:21 runtime_log
[2026-03-04 10:21:55] -rw------- 1 boinc boinc   1648640 Mar  4 10:21 result.tar.gz
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc      9166 Mar  4 10:21 runtime_log.err
[2026-03-04 10:21:55] -rw------- 1 boinc boinc       651 Mar  4 10:21 pDSLDmq9dG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhm7KDmNcJubn.diag
[2026-03-04 10:21:55] -rw-rw-r-- 1 boinc boinc     20846 Mar  4 10:21 stderr.txt
[2026-03-04 10:21:55] HITS file was successfully produced:
[2026-03-04 10:21:55] -rw------- 1 boinc boinc 232742840 Mar  4 10:19 shared/HITS.pool.root.1
[2026-03-04 10:21:55]  *** Contents of shared directory: ***
[2026-03-04 10:21:55] total 512636
[2026-03-04 10:21:55] -rw-r--r-- 2 boinc boinc 289922443 Mar  4 07:57 ATLAS.root_0
[2026-03-04 10:21:55] -rw-r--r-- 2 boinc boinc    597976 Mar  4 07:57 input.tar.gz
[2026-03-04 10:21:55] -rw-r--r-- 2 boinc boinc     15845 Mar  4 07:57 start_atlas.sh
[2026-03-04 10:21:55] -rw------- 1 boinc boinc 232742840 Mar  4 10:19 HITS.pool.root.1
[2026-03-04 10:21:55] -rw------- 1 boinc boinc   1648640 Mar  4 10:21 result.tar.gz
10:21:57 (3095696): run_atlas exited; CPU time 57351.424628
10:21:57 (3095696): called boinc_finish(0)

</stderr_txt>
]]>

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