Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:35:47 (3717297): wrapper (7.7.26015): starting
06:35:47 (3717297): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 06:35:47] Arguments: --nthreads 4
[2026-03-03 06:35:47] Threads: 4
[2026-03-03 06:35:47] Checking for CVMFS
[2026-03-03 06:35:47] No cvmfs_config command found, will try listing directly
[2026-03-03 06:35:47] CVMFS is ok
[2026-03-03 06:35:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 06:35:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 06:35:47] Further information can be found at the LHC@home message board.
[2026-03-03 06:35:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 06:35:47] Checking for apptainer binary...
[2026-03-03 06:35:47] which: no apptainer in ((null))
[2026-03-03 06:35:47] apptainer is not installed, using version from CVMFS
[2026-03-03 06:35:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 06:35:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-03 06:35:48] apptainer works
[2026-03-03 06:35:48] Set ATHENA_PROC_NUMBER=4
[2026-03-03 06:35:48] Set ATHENA_CORE_NUMBER=4
[2026-03-03 06:35:48] Starting ATLAS job with PandaID=7034261584
[2026-03-03 06:35:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 13:04:59]  *** The last 200 lines of the pilot log: ***
[2026-03-03 13:04:59] 2026-03-03 11:51:11,581 | INFO     | job 7034261584 has finished - writing final server update
[2026-03-03 13:04:59] 2026-03-03 11:51:11,581 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3103671/.job.ad'
[2026-03-03 13:04:59] 2026-03-03 11:51:11,581 | INFO     | total number of processed events: 400 (read)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,606 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-7034261584/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,606 | INFO     | extracted standard info from prmon json
[2026-03-03 13:04:59] 2026-03-03 11:51:11,606 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 13:04:59] 2026-03-03 11:51:11,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 13:04:59] 2026-03-03 11:51:11,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 13:04:59] 2026-03-03 11:51:11,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 13:04:59] 2026-03-03 11:51:11,613 | INFO     | fitting pss+swap vs Time
[2026-03-03 13:04:59] 2026-03-03 11:51:11,614 | INFO     | sum of square deviations: 15579529320.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,617 | INFO     | sum of deviations: 28275559726.000004
[2026-03-03 13:04:59] 2026-03-03 11:51:11,617 | INFO     | mean x: 1772527422.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,617 | INFO     | mean y: 2298618.1463414636
[2026-03-03 13:04:59] 2026-03-03 11:51:11,618 | INFO     | intersect: -3214692342.061551
[2026-03-03 13:04:59] 2026-03-03 11:51:11,618 | INFO     | chi2: 2.0629202826384567
[2026-03-03 13:04:59] 2026-03-03 11:51:11,619 | INFO     | sum of square deviations: 14954754815.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,622 | INFO     | sum of deviations: 50376702959.5
[2026-03-03 13:04:59] 2026-03-03 11:51:11,622 | INFO     | mean x: 1772527269.5
[2026-03-03 13:04:59] 2026-03-03 11:51:11,622 | INFO     | mean y: 2303952.0027472526
[2026-03-03 13:04:59] 2026-03-03 11:51:11,623 | INFO     | intersect: -5968645143.97647
[2026-03-03 13:04:59] 2026-03-03 11:51:11,623 | INFO     | chi2: 1.2852420450267044
[2026-03-03 13:04:59] 2026-03-03 11:51:11,623 | INFO     | current chi2=1.2852420450267044 (change=37.6979296852474 %)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,624 | INFO     | sum of square deviations: 14346910860.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,627 | INFO     | sum of deviations: 49453836247.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,627 | INFO     | mean x: 1772527117.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,627 | INFO     | mean y: 2303720.454038997
[2026-03-03 13:04:59] 2026-03-03 11:51:11,627 | INFO     | intersect: -6107601515.793105
[2026-03-03 13:04:59] 2026-03-03 11:51:11,628 | INFO     | chi2: 1.2854597370993288
[2026-03-03 13:04:59] 2026-03-03 11:51:11,628 | INFO     | current chi2=1.2854597370993288 (change=-0.01693782688380152 %)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,628 | INFO     | right removable region: 358
[2026-03-03 13:04:59] 2026-03-03 11:51:11,628 | INFO     | sum of square deviations: 14954754815.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,632 | INFO     | sum of deviations: -16371841911.000002
[2026-03-03 13:04:59] 2026-03-03 11:51:11,632 | INFO     | mean x: 1772527574.5
[2026-03-03 13:04:59] 2026-03-03 11:51:11,632 | INFO     | mean y: 2309436.653846154
[2026-03-03 13:04:59] 2026-03-03 11:51:11,632 | INFO     | intersect: 1942798705.2237957
[2026-03-03 13:04:59] 2026-03-03 11:51:11,633 | INFO     | chi2: 0.8036330340025971
[2026-03-03 13:04:59] 2026-03-03 11:51:11,633 | INFO     | current chi2=0.8036330340025971 (change=61.04391232341961 %)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,633 | INFO     | sum of square deviations: 14346910860.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,637 | INFO     | sum of deviations: -19905777053.999992
[2026-03-03 13:04:59] 2026-03-03 11:51:11,637 | INFO     | mean x: 1772527727.0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,637 | INFO     | mean y: 2310318.008356546
[2026-03-03 13:04:59] 2026-03-03 11:51:11,637 | INFO     | intersect: 2461623134.5442057
[2026-03-03 13:04:59] 2026-03-03 11:51:11,638 | INFO     | chi2: 0.7965893510625179
[2026-03-03 13:04:59] 2026-03-03 11:51:11,638 | INFO     | current chi2=0.7965893510625179 (change=0.8764800153867759 %)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,638 | INFO     | left removable region: 20
[2026-03-03 13:04:59] 2026-03-03 11:51:11,638 | INFO     | sum of square deviations: 11973599384.5
[2026-03-03 13:04:59] 2026-03-03 11:51:11,641 | INFO     | sum of deviations: 3368012855.4999986
[2026-03-03 13:04:59] 2026-03-03 11:51:11,642 | INFO     | mean x: 1772527696.5
[2026-03-03 13:04:59] 2026-03-03 11:51:11,642 | INFO     | mean y: 2315487.671597633
[2026-03-03 13:04:59] 2026-03-03 11:51:11,642 | INFO     | intersect: -496272771.11630845
[2026-03-03 13:04:59] 2026-03-03 11:51:11,642 | INFO     | chi2: 0.008152920091013604
[2026-03-03 13:04:59] 2026-03-03 11:51:11,643 | INFO     | current memory leak: 0.28 B/s (using 338 data points, chi2=0.01)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,643 | INFO     | could have reported an average CPU frequency of 2764 MHz (16 samples)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,643 | INFO     | ..............................
[2026-03-03 13:04:59] 2026-03-03 11:51:11,643 | INFO     | . Timing measurements:
[2026-03-03 13:04:59] 2026-03-03 11:51:11,643 | INFO     | . get job = 0 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | . initial setup = 8 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | . payload setup = 9 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | . stage-in = 0 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | . payload execution = 22474 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | . stage-out = 1 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | . log creation = 0 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,644 | INFO     | ..............................
[2026-03-03 13:04:59] 2026-03-03 11:51:11,656 | INFO     | time since job start (22502s) is within the limit (349056.0s)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,732 | INFO     | 
[2026-03-03 13:04:59] 2026-03-03 11:51:11,732 | INFO     | job summary report
[2026-03-03 13:04:59] 2026-03-03 11:51:11,732 | INFO     | --------------------------------------------------
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | PanDA job id: 7034261584
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | task id: 48843666
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | errors: (none)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | pilot state: finished 
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | transexitcode: 0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | exeerrorcode: 0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | exeerrordiag: 
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | exitcode: 0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | exitmsg: OK
[2026-03-03 13:04:59] 2026-03-03 11:51:11,733 | INFO     | cpuconsumptiontime: 86530 s
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | nevents: 400
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | neventsw: 0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | pid: 3770000
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | pgrp: 3770000
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | corecount: 4
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | event service: False
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | sizes: {0: 2281980, 1: 2282441, 12: 2282441, 22487: 2317853, 22488: 2331672, 22490: 2331728, 22491: 2332050}
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | --------------------------------------------------
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | 
[2026-03-03 13:04:59] 2026-03-03 11:51:11,734 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-03-03 13:04:59] 2026-03-03 11:51:11,766 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,766 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,766 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | job 7034261584 has completed (purged errors)
[2026-03-03 13:04:59] 2026-03-03 11:51:11,768 | INFO     | overall cleanup function is called
[2026-03-03 13:04:59] 2026-03-03 11:51:12,778 | INFO     | --- collectZombieJob: --- 10, [3770000]
[2026-03-03 13:04:59] 2026-03-03 11:51:12,778 | INFO     | zombie collector waiting for pid 3770000
[2026-03-03 13:04:59] 2026-03-03 11:51:12,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 13:04:59] 2026-03-03 11:51:12,778 | INFO     | collected zombie processes
[2026-03-03 13:04:59] 2026-03-03 11:51:12,778 | INFO     | will attempt to kill all subprocesses of pid=3770000
[2026-03-03 13:04:59] 2026-03-03 11:51:13,597 | INFO     | process IDs to be killed: [3770000] (in reverse order)
[2026-03-03 13:04:59] 2026-03-03 11:51:13,884 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 13:04:59] 2026-03-03 11:51:13,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 13:04:59] 2026-03-03 11:51:13,914 | INFO     | did not find any defunct processes belonging to 3770000
[2026-03-03 13:04:59] 2026-03-03 11:51:13,938 | INFO     | did not find any defunct processes belonging to 3770000
[2026-03-03 13:04:59] 2026-03-03 11:51:13,938 | INFO     | ready for new job
[2026-03-03 13:04:59] 2026-03-03 11:51:13,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 13:04:59] 2026-03-03 11:51:13,942 | INFO     | **************************************
[2026-03-03 13:04:59] 2026-03-03 11:51:13,942 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 13:04:59] 2026-03-03 11:51:13,942 | INFO     | **************************************
[2026-03-03 13:04:59] 2026-03-03 11:51:13,942 | INFO     | 
[2026-03-03 13:04:59] 2026-03-03 11:51:13,951 | INFO     | architecture information:
[2026-03-03 13:04:59] 2026-03-03 11:51:13,951 | INFO     | executing command: cat /etc/os-release
[2026-03-03 13:04:59] 2026-03-03 11:51:13,975 | INFO     | cat /etc/os-release:
[2026-03-03 13:04:59] NAME="CentOS Linux"
[2026-03-03 13:04:59] VERSION="7 (Core)"
[2026-03-03 13:04:59] ID="centos"
[2026-03-03 13:04:59] ID_LIKE="rhel fedora"
[2026-03-03 13:04:59] VERSION_ID="7"
[2026-03-03 13:04:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 13:04:59] ANSI_COLOR="0;31"
[2026-03-03 13:04:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 13:04:59] HOME_URL="https://www.centos.org/"
[2026-03-03 13:04:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 13:04:59] 
[2026-03-03 13:04:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 13:04:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 13:04:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 13:04:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 13:04:59] 
[2026-03-03 13:04:59] 2026-03-03 11:51:13,975 | INFO     | **************************************
[2026-03-03 13:04:59] 2026-03-03 11:51:14,478 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-03-03 13:04:59] 2026-03-03 11:51:14,501 | INFO     | sufficient remaining disk space (3328174981120 B)
[2026-03-03 13:04:59] 2026-03-03 11:51:14,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 13:04:59] 2026-03-03 11:51:14,502 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 13:04:59] 2026-03-03 11:51:14,502 | INFO     | update_server=False
[2026-03-03 13:04:59] 2026-03-03 11:51:14,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 13:04:59] 2026-03-03 11:51:14,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:04:59] 2026-03-03 11:51:14,503 | INFO     | aborting loop
[2026-03-03 13:04:59] 2026-03-03 11:51:14,616 | INFO     | all payload control threads have been joined
[2026-03-03 13:04:59] 2026-03-03 11:51:14,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 13:04:59] 2026-03-03 11:51:15,312 | INFO     | all data control threads have been joined
[2026-03-03 13:04:59] 2026-03-03 11:51:15,507 | INFO     | [job] retrieve thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:15,508 | INFO     | [job] job monitor thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:15,590 | INFO     | [payload] failed_post thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:15,591 | INFO     | [payload] validate_post thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:15,592 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:15,621 | INFO     | [payload] control thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:15,669 | INFO     | all job control threads have been joined
[2026-03-03 13:04:59] 2026-03-03 11:51:16,088 | INFO     | [data] copytool_in thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,243 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,317 | INFO     | [data] control thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,498 | INFO     | [job] validate thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,603 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,634 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,674 | INFO     | [job] control thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:16,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:04:59] 2026-03-03 11:51:16,944 | INFO     | [data] copytool_out thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:17,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 13:04:59] 2026-03-03 11:51:17,748 | INFO     | [job] queue monitor thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:21,126 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 13:04:59] 2026-03-03 11:51:45,416 | INFO     | [monitor] cgroup control has ended
[2026-03-03 13:04:59] 2026-03-03 11:51:45,666 | INFO     | PID=3737488 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 13:04:59] 2026-03-03 11:51:45,666 | INFO     | .. there are 18 such processes running
[2026-03-03 13:04:59] 2026-03-03 11:51:45,666 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 13:04:59] 2026-03-03 11:51:45,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 13:04:59] 2026-03-03 11:51:45,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 13:04:59] 2026-03-03 11:51:45,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23153081325376)>', '<ExcThread(monitor, started 23152840419072)>']
[2026-03-03 13:04:59] 2026-03-03 11:51:46,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 13:04:59] 2026-03-03 11:51:46,672 | INFO     | [monitor] control thread has ended
[2026-03-03 13:04:59] 2026-03-03 11:51:50,747 | INFO     | all workflow threads have been joined
[2026-03-03 13:04:59] 2026-03-03 11:51:50,747 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 13:04:59] 2026-03-03 11:51:50,747 | INFO     | traces error code: 0
[2026-03-03 13:04:59] 2026-03-03 11:51:50,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 13:04:59] 2026-03-03 11:51:50,891 [wrapper] ==== pilot stdout END ====
[2026-03-03 13:04:59] 2026-03-03 11:51:50,895 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 13:04:59] 2026-03-03 11:51:50,899 [wrapper] pilotpid: 3737488
[2026-03-03 13:04:59] 2026-03-03 11:51:50,903 [wrapper] Pilot exit status: 0
[2026-03-03 13:04:59] 2026-03-03 11:51:50,918 [wrapper] pandaids: 7034261584
[2026-03-03 13:04:59] 2026-03-03 11:51:51,124 [wrapper] cleanup supervisor_pilot  109763 3737489
[2026-03-03 13:04:59] 2026-03-03 11:51:51,128 [wrapper] Test setup, not cleaning
[2026-03-03 13:04:59] 2026-03-03 11:51:51,133 [wrapper] apfmon messages muted
[2026-03-03 13:04:59] 2026-03-03 11:51:51,137 [wrapper] ==== wrapper stdout END ====
[2026-03-03 13:04:59] 2026-03-03 11:51:51,141 [wrapper] ==== wrapper stderr END ====
[2026-03-03 13:04:59]  *** Error codes and diagnostics ***
[2026-03-03 13:04:59]     "exeErrorCode": 0,
[2026-03-03 13:04:59]     "exeErrorDiag": "",
[2026-03-03 13:04:59]     "pilotErrorCode": 0,
[2026-03-03 13:04:59]     "pilotErrorDiag": "",
[2026-03-03 13:04:59]  *** Listing of results directory ***
[2026-03-03 13:04:59] total 349508
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc    584627 Mar  1 03:30 pilot3.tar.gz
[2026-03-03 13:04:59] -rwx------ 1 boinc boinc     36322 Mar  1 03:32 runpilot2-wrapper.sh
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc      5111 Mar  1 03:33 queuedata.json
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc       100 Mar  3 06:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 13:04:59] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 06:35 run_atlas
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc       105 Mar  3 06:35 job.xml
[2026-03-03 13:04:59] -rw-r--r-- 2 boinc boinc 194366256 Mar  3 06:35 EVNT.48451499._000002.pool.root.1
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc      6699 Mar  3 06:35 init_data.xml
[2026-03-03 13:04:59] -rw-r--r-- 2 boinc boinc     15845 Mar  3 06:35 start_atlas.sh
[2026-03-03 13:04:59] drwxrwx--x 2 boinc boinc      4096 Mar  3 06:35 shared
[2026-03-03 13:04:59] -rw-r--r-- 2 boinc boinc    597988 Mar  3 06:35 input.tar.gz
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc         0 Mar  3 06:35 boinc_lockfile
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc      2676 Mar  3 06:35 pandaJob.out
[2026-03-03 13:04:59] -rw------- 1 boinc boinc    997730 Mar  3 06:36 agis_schedconf.cvmfs.json
[2026-03-03 13:04:59] -rw------- 1 boinc boinc       443 Mar  3 06:36 workernode_map.json
[2026-03-03 13:04:59] drwx------ 5 boinc boinc      4096 Mar  3 06:36 pilot3
[2026-03-03 13:04:59] -rw------- 1 boinc boinc 152342923 Mar  3 12:50 HITS.48843666._000036.pool.root.1
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc       528 Mar  3 12:50 boinc_task_state.xml
[2026-03-03 13:04:59] -rw------- 1 boinc boinc        95 Mar  3 12:50 pilot_heartbeat.json
[2026-03-03 13:04:59] -rw------- 1 boinc boinc      1025 Mar  3 12:51 memory_monitor_summary.json
[2026-03-03 13:04:59] -rw------- 1 boinc boinc   1516104 Mar  3 12:51 agis_ddmendpoints.agis.ALL.json
[2026-03-03 13:04:59] -rw------- 1 boinc boinc    512531 Mar  3 12:51 log.48843666._000036.job.log.tgz.1
[2026-03-03 13:04:59] -rw------- 1 boinc boinc      6333 Mar  3 12:51 heartbeat.json
[2026-03-03 13:04:59] -rw------- 1 boinc boinc      4831 Mar  3 12:51 pilotlog.txt
[2026-03-03 13:04:59] -rw------- 1 boinc boinc   3110875 Mar  3 12:51 log.48843666._000036.job.log.1
[2026-03-03 13:04:59] -rw------- 1 boinc boinc       357 Mar  3 12:51 output.list
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc       620 Mar  3 12:51 runtime_log
[2026-03-03 13:04:59] -rw------- 1 boinc boinc   3645440 Mar  3 12:51 result.tar.gz
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc      9205 Mar  3 12:51 runtime_log.err
[2026-03-03 13:04:59] -rw------- 1 boinc boinc       666 Mar  3 12:51 WreLDmXmlG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCv6KDmyzNsQo.diag
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc        26 Mar  3 13:04 wrapper_checkpoint.txt
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc      8192 Mar  3 13:04 boinc_mmap_file
[2026-03-03 13:04:59] -rw-r--r-- 1 boinc boinc     20933 Mar  3 13:04 stderr.txt
[2026-03-03 13:04:59] HITS file was successfully produced:
[2026-03-03 13:04:59] -rw------- 1 boinc boinc 152342923 Mar  3 12:50 shared/HITS.pool.root.1
[2026-03-03 13:04:59]  *** Contents of shared directory: ***
[2026-03-03 13:04:59] total 342756
[2026-03-03 13:04:59] -rw-r--r-- 2 boinc boinc 194366256 Mar  3 06:35 ATLAS.root_0
[2026-03-03 13:04:59] -rw-r--r-- 2 boinc boinc     15845 Mar  3 06:35 start_atlas.sh
[2026-03-03 13:04:59] -rw-r--r-- 2 boinc boinc    597988 Mar  3 06:35 input.tar.gz
[2026-03-03 13:04:59] -rw------- 1 boinc boinc 152342923 Mar  3 12:50 HITS.pool.root.1
[2026-03-03 13:04:59] -rw------- 1 boinc boinc   3645440 Mar  3 12:51 result.tar.gz
13:05:00 (3717297): run_atlas exited; CPU time 88042.587368
13:05:00 (3717297): called boinc_finish(0)

</stderr_txt>
]]>

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