Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:37:38 (26059): wrapper (7.7.26015): starting
01:37:38 (26059): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 01:37:38] Arguments: --nthreads 8
[2026-03-01 01:37:38] Threads: 8
[2026-03-01 01:37:38] Checking for CVMFS
[2026-03-01 01:37:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 01:37:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 01:37:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 01:37:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 01:37:38] 2.11.2.0 2804 198975 115152 156760 3 50 15196495 20275200 1 130560 0 49886512 99.833 14205574 31414 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-01 01:37:38] CVMFS is ok
[2026-03-01 01:37:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 01:37:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 01:37:38] Further information can be found at the LHC@home message board.
[2026-03-01 01:37:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 01:37:38] Checking for apptainer binary...
[2026-03-01 01:37:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 01:37:38] Running /usr/bin/apptainer --version
[2026-03-01 01:37:38] apptainer version 1.3.2-1.el7
[2026-03-01 01:37:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 01:37:40] c-204-28.aglt2.org
[2026-03-01 01:37:40] apptainer works
[2026-03-01 01:37:40] Set ATHENA_PROC_NUMBER=8
[2026-03-01 01:37:40] Set ATHENA_CORE_NUMBER=8
[2026-03-01 01:37:40] Starting ATLAS job with PandaID=7034260859
[2026-03-01 01:37:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 03:16:20]  *** The last 200 lines of the pilot log: ***
[2026-03-01 03:16:20]  direct_access_lan=False
[2026-03-01 03:16:20]  direct_access_wan=False
[2026-03-01 03:16:20]  domain=
[2026-03-01 03:16:20]  filesize=342770
[2026-03-01 03:16:20]  filetype=log
[2026-03-01 03:16:20]  guid=ebcb5330-9a27-43e7-9e9d-e2327403e316
[2026-03-01 03:16:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-01 03:16:20]  is_altstaged=None
[2026-03-01 03:16:20]  is_tar=False
[2026-03-01 03:16:20]  lfn=log.48700938._001012.job.log.tgz.1
[2026-03-01 03:16:20]  mtime=0
[2026-03-01 03:16:20]  protocol_id=None
[2026-03-01 03:16:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 03:16:20]  replicas=None
[2026-03-01 03:16:20]  scope=mc23_13p6TeV
[2026-03-01 03:16:20]  status=None
[2026-03-01 03:16:20]  status_code=0
[2026-03-01 03:16:20]  storage_token=
[2026-03-01 03:16:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7034260859/log.48700938._001012.job.log.tgz.1
[2026-03-01 03:16:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/93/log.48700938._001012.job.log.tgz.1
[2026-03-01 03:16:20]  workdir=None
[2026-03-01 03:16:20] ]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,480 | INFO     | transferring file log.48700938._001012.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7034260859/log.48700938._001012.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-01 03:16:20] 2026-03-01 08:15:27,481 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7034260859/log.48700938._001012.job.log.tgz.1 /tmp/boinchome/slots/0/log.48700938._001012.job
[2026-03-01 03:16:20] 2026-03-01 08:15:27,506 | INFO     | adding to output.list: log.48700938._001012.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/93/log.48700938._001012.job.log.tg
[2026-03-01 03:16:20] 2026-03-01 08:15:27,507 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 03:16:20] 2026-03-01 08:15:27,507 | INFO     | summary of transferred files:
[2026-03-01 03:16:20] 2026-03-01 08:15:27,508 | INFO     |  -- lfn=log.48700938._001012.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 03:16:20] 2026-03-01 08:15:27,508 | INFO     | stage-out finished correctly
[2026-03-01 03:16:20] 2026-03-01 08:15:27,599 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 03:16:20] 2026-03-01 08:15:27,684 | INFO     | job 7034260859 has state=finished
[2026-03-01 03:16:20] 2026-03-01 08:15:27,684 | INFO     | preparing for final server update for job 7034260859 in state='finished'
[2026-03-01 03:16:20] 2026-03-01 08:15:27,685 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7034260859/jobReport.json
[2026-03-01 03:16:20] 2026-03-01 08:15:27,688 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-01 03:16:20] 2026-03-01 08:15:27,688 | INFO     | this job has now completed (state=finished)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,688 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,689 | INFO     | log transfer has been attempted: DONE
[2026-03-01 03:16:20] 2026-03-01 08:15:27,689 | INFO     | job 7034260859 has finished - writing final server update
[2026-03-01 03:16:20] 2026-03-01 08:15:27,689 | INFO     | total number of processed events: 400 (read)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,691 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7034260859/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,691 | INFO     | extracted standard info from prmon json
[2026-03-01 03:16:20] 2026-03-01 08:15:27,691 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 03:16:20] 2026-03-01 08:15:27,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 03:16:20] 2026-03-01 08:15:27,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 03:16:20] 2026-03-01 08:15:27,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 03:16:20] 2026-03-01 08:15:27,694 | INFO     | fitting pss+swap vs Time
[2026-03-01 03:16:20] 2026-03-01 08:15:27,694 | INFO     | sum of square deviations: 218571540.0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,694 | INFO     | sum of deviations: -12032260247.999996
[2026-03-01 03:16:20] 2026-03-01 08:15:27,694 | INFO     | mean x: 1772350099.0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,695 | INFO     | mean y: 2553697.8651685393
[2026-03-01 03:16:20] 2026-03-01 08:15:27,695 | INFO     | intersect: 97569591207.58194
[2026-03-01 03:16:20] 2026-03-01 08:15:27,695 | INFO     | chi2: 0.10001059359277027
[2026-03-01 03:16:20] 2026-03-01 08:15:27,695 | INFO     | current memory leak: -55.05 B/s (using 89 data points, chi2=0.10)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,695 | INFO     | could have reported an average CPU frequency of 1762 MHz (7 samples)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | ..............................
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . Timing measurements:
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . get job = 0 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . initial setup = 8 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . payload setup = 8 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . stage-in = 0 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . payload execution = 5819 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,696 | INFO     | . stage-out = 0 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,697 | INFO     | . log creation = 0 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,697 | INFO     | ..............................
[2026-03-01 03:16:20] 2026-03-01 08:15:27,778 | INFO     | 
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | job summary report
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | --------------------------------------------------
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | PanDA job id: 7034260859
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | task id: 48700938
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | errors: (none)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | pilot state: finished 
[2026-03-01 03:16:20] 2026-03-01 08:15:27,779 | INFO     | transexitcode: 0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | exeerrorcode: 0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | exeerrordiag: 
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | exitcode: 0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | exitmsg: OK
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | cpuconsumptiontime: 42485 s
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | nevents: 400
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | neventsw: 0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | pid: 1830
[2026-03-01 03:16:20] 2026-03-01 08:15:27,780 | INFO     | pgrp: 1830
[2026-03-01 03:16:20] 2026-03-01 08:15:27,781 | INFO     | corecount: 8
[2026-03-01 03:16:20] 2026-03-01 08:15:27,781 | INFO     | event service: False
[2026-03-01 03:16:20] 2026-03-01 08:15:27,781 | INFO     | sizes: {0: 2281759, 1: 2282220, 12: 2282220, 5831: 2308884, 5832: 2318076}
[2026-03-01 03:16:20] 2026-03-01 08:15:27,781 | INFO     | --------------------------------------------------
[2026-03-01 03:16:20] 2026-03-01 08:15:27,781 | INFO     | 
[2026-03-01 03:16:20] 2026-03-01 08:15:27,781 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-01 03:16:20] 2026-03-01 08:15:27,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,809 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,812 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,812 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 03:16:20] 2026-03-01 08:15:27,813 | INFO     | job 7034260859 has completed (purged errors)
[2026-03-01 03:16:20] 2026-03-01 08:15:27,813 | INFO     | overall cleanup function is called
[2026-03-01 03:16:20] 2026-03-01 08:15:28,821 | INFO     | --- collectZombieJob: --- 10, [1830]
[2026-03-01 03:16:20] 2026-03-01 08:15:28,821 | INFO     | zombie collector waiting for pid 1830
[2026-03-01 03:16:20] 2026-03-01 08:15:28,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 03:16:20] 2026-03-01 08:15:28,822 | INFO     | collected zombie processes
[2026-03-01 03:16:20] 2026-03-01 08:15:28,822 | INFO     | will attempt to kill all subprocesses of pid=1830
[2026-03-01 03:16:20] 2026-03-01 08:15:28,909 | INFO     | process IDs to be killed: [1830] (in reverse order)
[2026-03-01 03:16:20] 2026-03-01 08:15:28,972 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 03:16:20] 2026-03-01 08:15:28,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 03:16:20] 2026-03-01 08:15:28,977 | INFO     | did not find any defunct processes belonging to 1830
[2026-03-01 03:16:20] 2026-03-01 08:15:28,980 | INFO     | did not find any defunct processes belonging to 1830
[2026-03-01 03:16:20] 2026-03-01 08:15:28,980 | INFO     | ready for new job
[2026-03-01 03:16:20] 2026-03-01 08:15:28,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 03:16:20] 2026-03-01 08:15:28,982 | INFO     | **************************************
[2026-03-01 03:16:20] 2026-03-01 08:15:28,982 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 03:16:20] 2026-03-01 08:15:28,982 | INFO     | **************************************
[2026-03-01 03:16:20] 2026-03-01 08:15:28,982 | INFO     | 
[2026-03-01 03:16:20] 2026-03-01 08:15:28,983 | INFO     | architecture information:
[2026-03-01 03:16:20] 2026-03-01 08:15:28,983 | INFO     | executing command: cat /etc/os-release
[2026-03-01 03:16:20] 2026-03-01 08:15:29,001 | INFO     | cat /etc/os-release:
[2026-03-01 03:16:20] NAME="CentOS Linux"
[2026-03-01 03:16:20] VERSION="7 (Core)"
[2026-03-01 03:16:20] ID="centos"
[2026-03-01 03:16:20] ID_LIKE="rhel fedora"
[2026-03-01 03:16:20] VERSION_ID="7"
[2026-03-01 03:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 03:16:20] ANSI_COLOR="0;31"
[2026-03-01 03:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 03:16:20] HOME_URL="https://www.centos.org/"
[2026-03-01 03:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 03:16:20] 
[2026-03-01 03:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 03:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 03:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 03:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 03:16:20] 
[2026-03-01 03:16:20] 2026-03-01 08:15:29,002 | INFO     | **************************************
[2026-03-01 03:16:20] 2026-03-01 08:15:29,505 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-01 03:16:20] 2026-03-01 08:15:29,525 | INFO     | sufficient remaining disk space (18635292672 B)
[2026-03-01 03:16:20] 2026-03-01 08:15:29,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 03:16:20] 2026-03-01 08:15:29,526 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 03:16:20] 2026-03-01 08:15:29,526 | INFO     | update_server=False
[2026-03-01 03:16:20] 2026-03-01 08:15:29,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 03:16:20] 2026-03-01 08:15:29,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:16:20] 2026-03-01 08:15:29,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 03:16:20] 2026-03-01 08:15:29,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:16:20] 2026-03-01 08:15:29,527 | INFO     | aborting loop
[2026-03-01 03:16:20] 2026-03-01 08:15:30,224 | INFO     | all data control threads have been joined
[2026-03-01 03:16:20] 2026-03-01 08:15:30,518 | INFO     | all payload control threads have been joined
[2026-03-01 03:16:20] 2026-03-01 08:15:30,530 | INFO     | [job] queue monitor thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,532 | INFO     | [job] retrieve thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,533 | INFO     | [job] job monitor thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,588 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,595 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 03:16:20] 2026-03-01 08:15:30,611 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,857 | INFO     | [data] copytool_in thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:30,890 | INFO     | [payload] validate_post thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:31,089 | INFO     | [payload] failed_post thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:31,135 | INFO     | all job control threads have been joined
[2026-03-01 03:16:20] 2026-03-01 08:15:31,230 | INFO     | [data] control thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:31,520 | INFO     | [payload] control thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:31,950 | INFO     | [job] validate thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:32,140 | INFO     | [job] control thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:32,611 | INFO     | [data] copytool_out thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:32,754 | INFO     | job.realtimelogging is not enabled
[2026-03-01 03:16:20] 2026-03-01 08:15:33,533 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:33,760 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 03:16:20] 2026-03-01 08:15:58,413 | INFO     | 5853s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-01 03:16:20] 2026-03-01 08:15:59,533 | INFO     | PID=29811 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 03:16:20] 2026-03-01 08:15:59,533 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 03:16:20] 2026-03-01 08:15:59,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 03:16:20] 2026-03-01 08:15:59,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 03:16:20] 2026-03-01 08:16:12,995 | INFO     | [monitor] cgroup control has ended
[2026-03-01 03:16:20] 2026-03-01 08:16:14,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092000798528)>', '<ExcThread(monitor, started 140091280316160)>']
[2026-03-01 03:16:20] 2026-03-01 08:16:15,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 03:16:20] 2026-03-01 08:16:15,615 | INFO     | [monitor] control thread has ended
[2026-03-01 03:16:20] 2026-03-01 08:16:19,841 | INFO     | all workflow threads have been joined
[2026-03-01 03:16:20] 2026-03-01 08:16:19,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 03:16:20] 2026-03-01 08:16:19,842 | INFO     | traces error code: 0
[2026-03-01 03:16:20] 2026-03-01 08:16:19,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 03:16:20] 2026-03-01 08:16:19,972 [wrapper] ==== pilot stdout END ====
[2026-03-01 03:16:20] 2026-03-01 08:16:19,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 03:16:20] 2026-03-01 08:16:19,982 [wrapper] pilotpid: 29811
[2026-03-01 03:16:20] 2026-03-01 08:16:19,986 [wrapper] Pilot exit status: 0
[2026-03-01 03:16:20] 2026-03-01 08:16:20,005 [wrapper] pandaids: 7034260859
[2026-03-01 03:16:20] 2026-03-01 08:16:20,059 [wrapper] cleanup supervisor_pilot  6932 29812
[2026-03-01 03:16:20] 2026-03-01 08:16:20,064 [wrapper] Test setup, not cleaning
[2026-03-01 03:16:20] 2026-03-01 08:16:20,069 [wrapper] apfmon messages muted
[2026-03-01 03:16:20] 2026-03-01 08:16:20,074 [wrapper] ==== wrapper stdout END ====
[2026-03-01 03:16:20] 2026-03-01 08:16:20,079 [wrapper] ==== wrapper stderr END ====
[2026-03-01 03:16:20]  *** Error codes and diagnostics ***
[2026-03-01 03:16:20]     "exeErrorCode": 0,
[2026-03-01 03:16:20]     "exeErrorDiag": "",
[2026-03-01 03:16:20]     "pilotErrorCode": 0,
[2026-03-01 03:16:20]     "pilotErrorDiag": "",
[2026-03-01 03:16:20]  *** Listing of results directory ***
[2026-03-01 03:16:20] total 333504
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas    584627 Feb 28 21:30 pilot3.tar.gz
[2026-03-01 03:16:20] -rwx------ 1 boincer umatlas     36322 Feb 28 21:34 runpilot2-wrapper.sh
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas      5111 Feb 28 21:35 queuedata.json
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas       100 Mar  1 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 03:16:20] -rwxr-xr-x 1 boincer umatlas      7986 Mar  1 01:37 run_atlas
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas       105 Mar  1 01:37 job.xml
[2026-03-01 03:16:20] -rw-r--r-- 2 boincer umatlas 189928136 Mar  1 01:37 EVNT.48700936._000054.pool.root.1
[2026-03-01 03:16:20] -rw-r--r-- 2 boincer umatlas     15845 Mar  1 01:37 start_atlas.sh
[2026-03-01 03:16:20] drwxrwx--x 2 boincer umatlas      4096 Mar  1 01:37 shared
[2026-03-01 03:16:20] -rw-r--r-- 2 boincer umatlas    597928 Mar  1 01:37 input.tar.gz
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas         0 Mar  1 01:37 boinc_lockfile
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas      2499 Mar  1 01:37 pandaJob.out
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas        57 Mar  1 01:37 setup.sh.local
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas    998782 Mar  1 01:37 agis_schedconf.cvmfs.json
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas   1513015 Mar  1 01:37 agis_ddmendpoints.agis.ALL.json
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas       433 Mar  1 01:38 workernode_map.json
[2026-03-01 03:16:20] drwx------ 5 boincer umatlas      4096 Mar  1 01:38 pilot3
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas      5910 Mar  1 03:10 init_data.xml
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas 145293802 Mar  1 03:14 HITS.48700938._001012.pool.root.1
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas       529 Mar  1 03:15 boinc_task_state.xml
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas        95 Mar  1 03:15 pilot_heartbeat.json
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas      1047 Mar  1 03:15 memory_monitor_summary.json
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas    342770 Mar  1 03:15 log.48700938._001012.job.log.tgz.1
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas      6396 Mar  1 03:15 heartbeat.json
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas      8192 Mar  1 03:16 boinc_mmap_file
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas        27 Mar  1 03:16 wrapper_checkpoint.txt
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas      4929 Mar  1 03:16 pilotlog.txt
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas    833649 Mar  1 03:16 log.48700938._001012.job.log.1
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas       357 Mar  1 03:16 output.list
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas       620 Mar  1 03:16 runtime_log
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas   1198080 Mar  1 03:16 result.tar.gz
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas       658 Mar  1 03:16 yODLDmMolG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmPi8KDmGQbBUo.diag
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas      9341 Mar  1 03:16 runtime_log.err
[2026-03-01 03:16:20] -rw-r--r-- 1 boincer umatlas     20921 Mar  1 03:16 stderr.txt
[2026-03-01 03:16:20] HITS file was successfully produced:
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas 145293802 Mar  1 03:14 shared/HITS.pool.root.1
[2026-03-01 03:16:20]  *** Contents of shared directory: ***
[2026-03-01 03:16:20] total 329144
[2026-03-01 03:16:20] -rw-r--r-- 2 boincer umatlas 189928136 Mar  1 01:37 ATLAS.root_0
[2026-03-01 03:16:20] -rw-r--r-- 2 boincer umatlas     15845 Mar  1 01:37 start_atlas.sh
[2026-03-01 03:16:20] -rw-r--r-- 2 boincer umatlas    597928 Mar  1 01:37 input.tar.gz
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas 145293802 Mar  1 03:14 HITS.pool.root.1
[2026-03-01 03:16:20] -rw------- 1 boincer umatlas   1198080 Mar  1 03:16 result.tar.gz
03:16:21 (26059): run_atlas exited; CPU time 42452.518353
03:16:21 (26059): called boinc_finish(0)

</stderr_txt>
]]>

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