Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:06 (1788148): wrapper (7.7.26015): starting
11:56:06 (1788148): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 11:56:06] Arguments: --nthreads 12
[2026-03-01 11:56:06] Threads: 12
[2026-03-01 11:56:06] Checking for CVMFS
[2026-03-01 11:56:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 11:56:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 11:56:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 11:56:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 11:56:06] 2.13.3.0 8852 28343 216848 156766 1 195 35024229 46080000 7360 130560 0 92080444 99.789 49049289 25289 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-01 11:56:06] CVMFS is ok
[2026-03-01 11:56:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 11:56:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 11:56:06] Further information can be found at the LHC@home message board.
[2026-03-01 11:56:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 11:56:06] Checking for apptainer binary...
[2026-03-01 11:56:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 11:56:06] Running /usr/bin/apptainer --version
[2026-03-01 11:56:06] apptainer version 1.4.5-2.el9
[2026-03-01 11:56:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 11:56:06] mff2103.farm.particle.cz
[2026-03-01 11:56:06] apptainer works
[2026-03-01 11:56:07] Set ATHENA_PROC_NUMBER=12
[2026-03-01 11:56:07] Set ATHENA_CORE_NUMBER=12
[2026-03-01 11:56:07] Starting ATLAS job with PandaID=7034242366
[2026-03-01 11:56:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 12:45:34]  *** The last 200 lines of the pilot log: ***
[2026-03-01 12:45:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 12:45:34]  replicas=None
[2026-03-01 12:45:34]  scope=mc23_13p6TeV
[2026-03-01 12:45:34]  status=None
[2026-03-01 12:45:34]  status_code=0
[2026-03-01 12:45:34]  storage_token=
[2026-03-01 12:45:34]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-7034242366/log.48700946._002347.job.log.tgz.1
[2026-03-01 12:45:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/12/log.48700946._002347.job.log.tgz.1
[2026-03-01 12:45:34]  workdir=None
[2026-03-01 12:45:34] ]
[2026-03-01 12:45:34] 2026-03-01 11:44:30,244 | INFO     | transferring file log.48700946._002347.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-7034242366/log.48700946._002347.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-01 12:45:34] 2026-03-01 11:44:30,244 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-7034242366/log.48700946._002347.job.log.tgz.1 /scratch/.boinc/slots/0/log.48700946._002347.j
[2026-03-01 12:45:34] 2026-03-01 11:44:30,270 | INFO     | adding to output.list: log.48700946._002347.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/12/log.48700946._002347.job.log.tg
[2026-03-01 12:45:34] 2026-03-01 11:44:30,271 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 12:45:34] 2026-03-01 11:44:30,271 | INFO     | summary of transferred files:
[2026-03-01 12:45:34] 2026-03-01 11:44:30,271 | INFO     |  -- lfn=log.48700946._002347.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 12:45:34] 2026-03-01 11:44:30,271 | INFO     | stage-out finished correctly
[2026-03-01 12:45:34] 2026-03-01 11:44:31,149 | INFO     | PID=1796335 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 12:45:34] 2026-03-01 11:44:31,149 | INFO     | .. there are 11 such processes running
[2026-03-01 12:45:34] 2026-03-01 11:44:31,869 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 12:45:34] 2026-03-01 11:44:32,150 | INFO     | time since job start (2888s) is within the limit (349056.0s)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,915 | INFO     | job 7034242366 has state=finished
[2026-03-01 12:45:34] 2026-03-01 11:44:33,915 | INFO     | preparing for final server update for job 7034242366 in state='finished'
[2026-03-01 12:45:34] 2026-03-01 11:44:33,916 | INFO     | reading metadata from: /scratch/.boinc/slots/0/PanDA_Pilot-7034242366/jobReport.json
[2026-03-01 12:45:34] 2026-03-01 11:44:33,918 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/0/workernode_map.json
[2026-03-01 12:45:34] 2026-03-01 11:44:33,918 | INFO     | this job has now completed (state=finished)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,918 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,918 | INFO     | log transfer has been attempted: DONE
[2026-03-01 12:45:34] 2026-03-01 11:44:33,919 | INFO     | job 7034242366 has finished - writing final server update
[2026-03-01 12:45:34] 2026-03-01 11:44:33,919 | INFO     | total number of processed events: 400 (read)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,937 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-7034242366/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,937 | INFO     | extracted standard info from prmon json
[2026-03-01 12:45:34] 2026-03-01 11:44:33,937 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 12:45:34] 2026-03-01 11:44:33,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 12:45:34] 2026-03-01 11:44:33,938 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 12:45:34] 2026-03-01 11:44:33,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 12:45:34] 2026-03-01 11:44:33,939 | INFO     | fitting pss+swap vs Time
[2026-03-01 12:45:34] 2026-03-01 11:44:33,939 | INFO     | sum of square deviations: 19832930.0
[2026-03-01 12:45:34] 2026-03-01 11:44:33,939 | INFO     | sum of deviations: -37851232.00000004
[2026-03-01 12:45:34] 2026-03-01 11:44:33,940 | INFO     | mean x: 1772364103.5
[2026-03-01 12:45:34] 2026-03-01 11:44:33,940 | INFO     | mean y: 2666594.45
[2026-03-01 12:45:34] 2026-03-01 11:44:33,940 | INFO     | intersect: 3385231090.4700317
[2026-03-01 12:45:34] 2026-03-01 11:44:33,940 | INFO     | chi2: 0.0026171733905919784
[2026-03-01 12:45:34] 2026-03-01 11:44:33,940 | INFO     | current memory leak: -1.91 B/s (using 40 data points, chi2=0.00)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,940 | INFO     | could have reported an average CPU frequency of 2779 MHz (5 samples)
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | ..............................
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . Timing measurements:
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . get job = 0 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . initial setup = 7 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . payload setup = 6 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . stage-in = 0 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . payload execution = 2862 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . stage-out = 0 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | . log creation = 0 s
[2026-03-01 12:45:34] 2026-03-01 11:44:33,941 | INFO     | ..............................
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | 
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | job summary report
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | --------------------------------------------------
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | PanDA job id: 7034242366
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | task id: 48700946
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | errors: (none)
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 12:45:34] 2026-03-01 11:44:34,030 | INFO     | pilot state: finished 
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | transexitcode: 0
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | exeerrorcode: 0
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | exeerrordiag: 
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | exitcode: 0
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | exitmsg: OK
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | cpuconsumptiontime: 28408 s
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | nevents: 400
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | neventsw: 0
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | pid: 1807032
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | pgrp: 1807032
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | corecount: 12
[2026-03-01 12:45:34] 2026-03-01 11:44:34,031 | INFO     | event service: False
[2026-03-01 12:45:34] 2026-03-01 11:44:34,032 | INFO     | sizes: {0: 2281929, 1: 2282219, 11: 2282219, 2873: 2307427, 2874: 2316427, 2876: 2316483, 2878: 2316837}
[2026-03-01 12:45:34] 2026-03-01 11:44:34,032 | INFO     | --------------------------------------------------
[2026-03-01 12:45:34] 2026-03-01 11:44:34,032 | INFO     | 
[2026-03-01 12:45:34] 2026-03-01 11:44:34,032 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2026-03-01 12:45:34] 2026-03-01 11:44:34,058 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,058 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,058 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,058 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | job 7034242366 has completed (purged errors)
[2026-03-01 12:45:34] 2026-03-01 11:44:34,060 | INFO     | overall cleanup function is called
[2026-03-01 12:45:34] 2026-03-01 11:44:35,070 | INFO     | --- collectZombieJob: --- 10, [1807032]
[2026-03-01 12:45:34] 2026-03-01 11:44:35,070 | INFO     | zombie collector waiting for pid 1807032
[2026-03-01 12:45:34] 2026-03-01 11:44:35,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 12:45:34] 2026-03-01 11:44:35,070 | INFO     | collected zombie processes
[2026-03-01 12:45:34] 2026-03-01 11:44:35,070 | INFO     | will attempt to kill all subprocesses of pid=1807032
[2026-03-01 12:45:34] 2026-03-01 11:44:35,459 | INFO     | process IDs to be killed: [1807032] (in reverse order)
[2026-03-01 12:45:34] 2026-03-01 11:44:35,591 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 12:45:34] 2026-03-01 11:44:35,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 12:45:34] 2026-03-01 11:44:35,605 | INFO     | did not find any defunct processes belonging to 1807032
[2026-03-01 12:45:34] 2026-03-01 11:44:35,616 | INFO     | did not find any defunct processes belonging to 1807032
[2026-03-01 12:45:34] 2026-03-01 11:44:35,617 | INFO     | ready for new job
[2026-03-01 12:45:34] 2026-03-01 11:44:35,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 12:45:34] 2026-03-01 11:44:35,618 | INFO     | **************************************
[2026-03-01 12:45:34] 2026-03-01 11:44:35,618 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 12:45:34] 2026-03-01 11:44:35,618 | INFO     | **************************************
[2026-03-01 12:45:34] 2026-03-01 11:44:35,619 | INFO     | 
[2026-03-01 12:45:34] 2026-03-01 11:44:35,624 | INFO     | architecture information:
[2026-03-01 12:45:34] 2026-03-01 11:44:35,625 | INFO     | executing command: cat /etc/os-release
[2026-03-01 12:45:34] 2026-03-01 11:44:35,647 | INFO     | cat /etc/os-release:
[2026-03-01 12:45:34] NAME="CentOS Linux"
[2026-03-01 12:45:34] VERSION="7 (Core)"
[2026-03-01 12:45:34] ID="centos"
[2026-03-01 12:45:34] ID_LIKE="rhel fedora"
[2026-03-01 12:45:34] VERSION_ID="7"
[2026-03-01 12:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 12:45:34] ANSI_COLOR="0;31"
[2026-03-01 12:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 12:45:34] HOME_URL="https://www.centos.org/"
[2026-03-01 12:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 12:45:34] 
[2026-03-01 12:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 12:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 12:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 12:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 12:45:34] 
[2026-03-01 12:45:34] 2026-03-01 11:44:35,647 | INFO     | **************************************
[2026-03-01 12:45:34] 2026-03-01 11:44:36,151 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-03-01 12:45:34] 2026-03-01 11:44:36,174 | INFO     | sufficient remaining disk space (1678881325056 B)
[2026-03-01 12:45:34] 2026-03-01 11:44:36,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 12:45:34] 2026-03-01 11:44:36,174 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 12:45:34] 2026-03-01 11:44:36,175 | INFO     | update_server=False
[2026-03-01 12:45:34] 2026-03-01 11:44:36,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 12:45:34] 2026-03-01 11:44:36,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 12:45:34] 2026-03-01 11:44:36,282 | INFO     | all payload control threads have been joined
[2026-03-01 12:45:34] 2026-03-01 11:44:36,339 | INFO     | all job control threads have been joined
[2026-03-01 12:45:34] 2026-03-01 11:44:36,458 | WARNING  | process 1807032 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 12:45:34] 2026-03-01 11:44:36,585 | INFO     | all data control threads have been joined
[2026-03-01 12:45:34] 2026-03-01 11:44:36,735 | INFO     | using path: /scratch/.boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 12:45:34] 2026-03-01 11:44:36,736 | INFO     | skipping file size check of payload stdout file (/scratch/.boinc/slots/0/PanDA_Pilot-7034242366/payload.stdout) since it has not been created yet
[2026-03-01 12:45:34] 2026-03-01 11:44:36,737 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-03-01 12:45:34] 2026-03-01 11:44:36,758 | INFO     | sufficient remaining disk space (1678881325056 B)
[2026-03-01 12:45:34] 2026-03-01 11:44:36,758 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-01 12:45:34] 2026-03-01 11:44:36,759 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/0/PanDA_Pilot-7034242366/HITS.48700946._002347.pool.root.1 since it does not exist
[2026-03-01 12:45:34] 2026-03-01 11:44:37,132 | INFO     | number of running child processes to parent process 1807032: 1
[2026-03-01 12:45:34] 2026-03-01 11:44:37,133 | INFO     | maximum number of monitored processes: 6
[2026-03-01 12:45:34] 2026-03-01 11:44:37,133 | INFO     | aborting job monitoring since job object (job id=7034242366) has expired
[2026-03-01 12:45:34] 2026-03-01 11:44:37,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 12:45:34] 2026-03-01 11:44:37,133 | INFO     | will abort loop
[2026-03-01 12:45:34] 2026-03-01 11:44:37,180 | INFO     | [job] retrieve thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,288 | INFO     | [payload] control thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,341 | INFO     | [job] validate thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,345 | INFO     | [job] control thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,590 | INFO     | [data] control thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,670 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,892 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,901 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:37,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 12:45:34] 2026-03-01 11:44:38,043 | INFO     | [data] copytool_in thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:38,134 | INFO     | [job] job monitor thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:38,181 | INFO     | [data] copytool_out thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:38,430 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:38,488 | INFO     | [payload] validate_post thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:38,518 | INFO     | [payload] failed_post thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:39,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 12:45:34] 2026-03-01 11:44:40,047 | INFO     | [job] queue monitor thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:44:41,974 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 12:45:34] 2026-03-01 11:45:05,622 | INFO     | PID=1796335 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 12:45:34] 2026-03-01 11:45:05,623 | INFO     | .. there are 11 such processes running
[2026-03-01 12:45:34] 2026-03-01 11:45:05,623 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 12:45:34] 2026-03-01 11:45:05,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 12:45:34] 2026-03-01 11:45:05,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 12:45:34] 2026-03-01 11:45:29,012 | INFO     | [monitor] cgroup control has ended
[2026-03-01 12:45:34] 2026-03-01 11:45:29,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487732168512)>', '<ExcThread(monitor, started 140487356831488)>']
[2026-03-01 12:45:34] 2026-03-01 11:45:29,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 12:45:34] 2026-03-01 11:45:29,722 | INFO     | [monitor] control thread has ended
[2026-03-01 12:45:34] 2026-03-01 11:45:34,134 | INFO     | all workflow threads have been joined
[2026-03-01 12:45:34] 2026-03-01 11:45:34,135 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 12:45:34] 2026-03-01 11:45:34,135 | INFO     | traces error code: 0
[2026-03-01 12:45:34] 2026-03-01 11:45:34,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 12:45:34] 2026-03-01 11:45:34,270 [wrapper] ==== pilot stdout END ====
[2026-03-01 12:45:34] 2026-03-01 11:45:34,273 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 12:45:34] 2026-03-01 11:45:34,277 [wrapper] pilotpid: 1796335
[2026-03-01 12:45:34] 2026-03-01 11:45:34,281 [wrapper] Pilot exit status: 0
[2026-03-01 12:45:34] 2026-03-01 11:45:34,296 [wrapper] pandaids: 7034242366
[2026-03-01 12:45:34] 2026-03-01 11:45:34,388 [wrapper] cleanup supervisor_pilot 1862752 1796336
[2026-03-01 12:45:34] 2026-03-01 11:45:34,392 [wrapper] Test setup, not cleaning
[2026-03-01 12:45:34] 2026-03-01 11:45:34,396 [wrapper] apfmon messages muted
[2026-03-01 12:45:34] 2026-03-01 11:45:34,399 [wrapper] ==== wrapper stdout END ====
[2026-03-01 12:45:34] 2026-03-01 11:45:34,402 [wrapper] ==== wrapper stderr END ====
[2026-03-01 12:45:34]  *** Error codes and diagnostics ***
[2026-03-01 12:45:34]     "exeErrorCode": 0,
[2026-03-01 12:45:34]     "exeErrorDiag": "",
[2026-03-01 12:45:34]     "pilotErrorCode": 0,
[2026-03-01 12:45:34]     "pilotErrorDiag": "",
[2026-03-01 12:45:34]  *** Listing of results directory ***
[2026-03-01 12:45:34] total 337464
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc    584627 Mar  1 03:30 pilot3.tar.gz
[2026-03-01 12:45:34] -rwx------ 1 boinc boinc     36322 Mar  1 03:31 runpilot2-wrapper.sh
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc      5111 Mar  1 03:31 queuedata.json
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc       100 Mar  1 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 12:45:34] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 11:56 run_atlas
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc       105 Mar  1 11:56 job.xml
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc      6676 Mar  1 11:56 init_data.xml
[2026-03-01 12:45:34] -rw-r--r-- 2 boinc boinc 189180873 Mar  1 11:56 EVNT.48700944._000092.pool.root.1
[2026-03-01 12:45:34] -rw-r--r-- 2 boinc boinc     15845 Mar  1 11:56 start_atlas.sh
[2026-03-01 12:45:34] drwxrwx--x 2 boinc boinc      4096 Mar  1 11:56 shared
[2026-03-01 12:45:34] -rw-r--r-- 2 boinc boinc    597930 Mar  1 11:56 input.tar.gz
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc         0 Mar  1 11:56 boinc_lockfile
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc      2498 Mar  1 11:56 pandaJob.out
[2026-03-01 12:45:34] -rw------- 1 boinc boinc    998198 Mar  1 11:56 agis_schedconf.cvmfs.json
[2026-03-01 12:45:34] -rw------- 1 boinc boinc   1513015 Mar  1 11:56 agis_ddmendpoints.agis.ALL.json
[2026-03-01 12:45:34] -rw------- 1 boinc boinc       436 Mar  1 11:56 workernode_map.json
[2026-03-01 12:45:34] drwx------ 5 boinc boinc      4096 Mar  1 11:56 pilot3
[2026-03-01 12:45:34] -rw------- 1 boinc boinc 150868102 Mar  1 12:44 HITS.48700946._002347.pool.root.1
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc       529 Mar  1 12:44 boinc_task_state.xml
[2026-03-01 12:45:34] -rw------- 1 boinc boinc        95 Mar  1 12:44 pilot_heartbeat.json
[2026-03-01 12:45:34] -rw------- 1 boinc boinc      1018 Mar  1 12:44 memory_monitor_summary.json
[2026-03-01 12:45:34] -rw------- 1 boinc boinc    348266 Mar  1 12:44 log.48700946._002347.job.log.tgz.1
[2026-03-01 12:45:34] -rw------- 1 boinc boinc      6325 Mar  1 12:44 heartbeat.json
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc      8192 Mar  1 12:45 boinc_mmap_file
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc        27 Mar  1 12:45 wrapper_checkpoint.txt
[2026-03-01 12:45:34] -rw------- 1 boinc boinc      5991 Mar  1 12:45 pilotlog.txt
[2026-03-01 12:45:34] -rw------- 1 boinc boinc    440969 Mar  1 12:45 log.48700946._002347.job.log.1
[2026-03-01 12:45:34] -rw------- 1 boinc boinc       357 Mar  1 12:45 output.list
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc       620 Mar  1 12:45 runtime_log
[2026-03-01 12:45:34] -rw------- 1 boinc boinc    808960 Mar  1 12:45 result.tar.gz
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc      8879 Mar  1 12:45 runtime_log.err
[2026-03-01 12:45:34] -rw------- 1 boinc boinc       662 Mar  1 12:45 Q1kLDmlllG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxf8KDmXEzkym.diag
[2026-03-01 12:45:34] -rw-r--r-- 1 boinc boinc     22152 Mar  1 12:45 stderr.txt
[2026-03-01 12:45:34] HITS file was successfully produced:
[2026-03-01 12:45:34] -rw------- 1 boinc boinc 150868102 Mar  1 12:44 shared/HITS.pool.root.1
[2026-03-01 12:45:34]  *** Contents of shared directory: ***
[2026-03-01 12:45:34] total 333484
[2026-03-01 12:45:34] -rw-r--r-- 2 boinc boinc 189180873 Mar  1 11:56 ATLAS.root_0
[2026-03-01 12:45:34] -rw-r--r-- 2 boinc boinc     15845 Mar  1 11:56 start_atlas.sh
[2026-03-01 12:45:34] -rw-r--r-- 2 boinc boinc    597930 Mar  1 11:56 input.tar.gz
[2026-03-01 12:45:34] -rw------- 1 boinc boinc 150868102 Mar  1 12:44 HITS.pool.root.1
[2026-03-01 12:45:34] -rw------- 1 boinc boinc    808960 Mar  1 12:45 result.tar.gz
12:45:35 (1788148): run_atlas exited; CPU time 28467.093714
12:45:35 (1788148): called boinc_finish(0)

</stderr_txt>
]]>

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