Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:13:52 (1131487): wrapper (7.7.26015): starting
02:13:52 (1131487): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 02:13:52] Arguments: --nthreads 4
[2026-03-03 02:13:52] Threads: 4
[2026-03-03 02:13:52] Checking for CVMFS
[2026-03-03 02:13:52] No cvmfs_config command found, will try listing directly
[2026-03-03 02:13:52] CVMFS is ok
[2026-03-03 02:13:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 02:13:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 02:13:52] Further information can be found at the LHC@home message board.
[2026-03-03 02:13:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 02:13:52] Checking for apptainer binary...
[2026-03-03 02:13:52] which: no apptainer in ((null))
[2026-03-03 02:13:52] apptainer is not installed, using version from CVMFS
[2026-03-03 02:13:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 02:13:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-03 02:13:52] apptainer works
[2026-03-03 02:13:52] Set ATHENA_PROC_NUMBER=4
[2026-03-03 02:13:52] Set ATHENA_CORE_NUMBER=4
[2026-03-03 02:13:52] Starting ATLAS job with PandaID=7034055503
[2026-03-03 02:13:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 05:44:35]  *** The last 200 lines of the pilot log: ***
[2026-03-03 05:44:35] 2026-03-03 04:32:55,467 | INFO     | time since job start (11921s) is within the limit (349056.0s)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,599 | INFO     | job 7034055503 has state=finished
[2026-03-03 05:44:35] 2026-03-03 04:32:55,600 | INFO     | preparing for final server update for job 7034055503 in state='finished'
[2026-03-03 05:44:35] 2026-03-03 04:32:55,600 | INFO     | reading metadata from: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7034055503/jobReport.json
[2026-03-03 05:44:35] 2026-03-03 04:32:55,602 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot88/slots/0/workernode_map.json
[2026-03-03 05:44:35] 2026-03-03 04:32:55,602 | INFO     | this job has now completed (state=finished)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,602 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,603 | INFO     | log transfer has been attempted: DONE
[2026-03-03 05:44:35] 2026-03-03 04:32:55,603 | INFO     | job 7034055503 has finished - writing final server update
[2026-03-03 05:44:35] 2026-03-03 04:32:55,603 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_899758/.job.ad'
[2026-03-03 05:44:35] 2026-03-03 04:32:55,603 | INFO     | total number of processed events: 400 (read)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,626 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7034055503/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,627 | INFO     | extracted standard info from prmon json
[2026-03-03 05:44:35] 2026-03-03 04:32:55,627 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 05:44:35] 2026-03-03 04:32:55,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 05:44:35] 2026-03-03 04:32:55,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 05:44:35] 2026-03-03 04:32:55,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 05:44:35] 2026-03-03 04:32:55,631 | INFO     | fitting pss+swap vs Time
[2026-03-03 05:44:35] 2026-03-03 04:32:55,631 | INFO     | sum of square deviations: 2299168690.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,632 | INFO     | sum of deviations: 20105207708.999996
[2026-03-03 05:44:35] 2026-03-03 04:32:55,633 | INFO     | mean x: 1772506400.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,633 | INFO     | mean y: 2330015.7384615387
[2026-03-03 05:44:35] 2026-03-03 04:32:55,633 | INFO     | intersect: -15497450184.178852
[2026-03-03 05:44:35] 2026-03-03 04:32:55,633 | INFO     | chi2: 1.3530447021051664
[2026-03-03 05:44:35] 2026-03-03 04:32:55,633 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 05:44:35] 2026-03-03 04:32:55,635 | INFO     | sum of deviations: 19598961175.50001
[2026-03-03 05:44:35] 2026-03-03 04:32:55,635 | INFO     | mean x: 1772506247.5
[2026-03-03 05:44:35] 2026-03-03 04:32:55,635 | INFO     | mean y: 2329567.7421052633
[2026-03-03 05:44:35] 2026-03-03 04:32:55,635 | INFO     | intersect: -16331711036.466286
[2026-03-03 05:44:35] 2026-03-03 04:32:55,635 | INFO     | chi2: 1.3539158515188756
[2026-03-03 05:44:35] 2026-03-03 04:32:55,635 | INFO     | current chi2=1.3539158515188756 (change=-0.06438437786673645 %)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,636 | INFO     | right removable region: 189
[2026-03-03 05:44:35] 2026-03-03 04:32:55,636 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 05:44:35] 2026-03-03 04:32:55,637 | INFO     | sum of deviations: -5309248520.999998
[2026-03-03 05:44:35] 2026-03-03 04:32:55,637 | INFO     | mean x: 1772506552.5
[2026-03-03 05:44:35] 2026-03-03 04:32:55,637 | INFO     | mean y: 2352211.515789474
[2026-03-03 05:44:35] 2026-03-03 04:32:55,637 | INFO     | intersect: 4427152845.88091
[2026-03-03 05:44:35] 2026-03-03 04:32:55,638 | INFO     | chi2: 0.005668968260060194
[2026-03-03 05:44:35] 2026-03-03 04:32:55,638 | INFO     | current chi2=0.005668968260060194 (change=99.5810213623216 %)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,638 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,639 | INFO     | sum of deviations: -5439050726.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,639 | INFO     | mean x: 1772506705.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,640 | INFO     | mean y: 2352327.718918919
[2026-03-03 05:44:35] 2026-03-03 04:32:55,640 | INFO     | intersect: 4912901635.894513
[2026-03-03 05:44:35] 2026-03-03 04:32:55,640 | INFO     | chi2: 0.005188414295136566
[2026-03-03 05:44:35] 2026-03-03 04:32:55,640 | INFO     | current chi2=0.005188414295136566 (change=8.476921070616918 %)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,640 | INFO     | left removable region: 20
[2026-03-03 05:44:35] 2026-03-03 04:32:55,640 | INFO     | sum of square deviations: 1496660620.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,641 | INFO     | sum of deviations: -3695162046.9999995
[2026-03-03 05:44:35] 2026-03-03 04:32:55,642 | INFO     | mean x: 1772506827.0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,642 | INFO     | mean y: 2350795.396449704
[2026-03-03 05:44:35] 2026-03-03 04:32:55,642 | INFO     | intersect: 4378559982.4724045
[2026-03-03 05:44:35] 2026-03-03 04:32:55,642 | INFO     | chi2: 0.004509465165298126
[2026-03-03 05:44:35] 2026-03-03 04:32:55,642 | INFO     | current memory leak: -2.47 B/s (using 169 data points, chi2=0.00)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | could have reported an average CPU frequency of 2756 MHz (10 samples)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | ..............................
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | . Timing measurements:
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | . get job = 0 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | . initial setup = 8 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | . payload setup = 9 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,643 | INFO     | . stage-in = 0 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,644 | INFO     | . payload execution = 11893 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,644 | INFO     | . stage-out = 1 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,644 | INFO     | . log creation = 0 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,644 | INFO     | ..............................
[2026-03-03 05:44:35] 2026-03-03 04:32:55,734 | INFO     | 
[2026-03-03 05:44:35] 2026-03-03 04:32:55,734 | INFO     | job summary report
[2026-03-03 05:44:35] 2026-03-03 04:32:55,734 | INFO     | --------------------------------------------------
[2026-03-03 05:44:35] 2026-03-03 04:32:55,734 | INFO     | PanDA job id: 7034055503
[2026-03-03 05:44:35] 2026-03-03 04:32:55,734 | INFO     | task id: 48787024
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | errors: (none)
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | pilot state: finished 
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | transexitcode: 0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | exeerrorcode: 0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | exeerrordiag: 
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | exitcode: 0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | exitmsg: OK
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | cpuconsumptiontime: 46242 s
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | nevents: 400
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | neventsw: 0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | pid: 1186415
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | pgrp: 1186415
[2026-03-03 05:44:35] 2026-03-03 04:32:55,735 | INFO     | corecount: 4
[2026-03-03 05:44:35] 2026-03-03 04:32:55,736 | INFO     | event service: False
[2026-03-03 05:44:35] 2026-03-03 04:32:55,736 | INFO     | sizes: {0: 2281818, 1: 2282335, 12: 2282335, 11905: 2312587, 11906: 2312586, 11908: 2321846, 11909: 2321984}
[2026-03-03 05:44:35] 2026-03-03 04:32:55,736 | INFO     | --------------------------------------------------
[2026-03-03 05:44:35] 2026-03-03 04:32:55,736 | INFO     | 
[2026-03-03 05:44:35] 2026-03-03 04:32:55,736 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-03-03 05:44:35] 2026-03-03 04:32:55,772 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 05:44:35] 2026-03-03 04:32:55,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 05:44:35] 2026-03-03 04:32:55,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 05:44:36] 2026-03-03 04:32:55,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 05:44:36] 2026-03-03 04:32:55,775 | INFO     | job 7034055503 has completed (purged errors)
[2026-03-03 05:44:36] 2026-03-03 04:32:55,775 | INFO     | overall cleanup function is called
[2026-03-03 05:44:36] 2026-03-03 04:32:56,784 | INFO     | --- collectZombieJob: --- 10, [1186415]
[2026-03-03 05:44:36] 2026-03-03 04:32:56,784 | INFO     | zombie collector waiting for pid 1186415
[2026-03-03 05:44:36] 2026-03-03 04:32:56,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 05:44:36] 2026-03-03 04:32:56,784 | INFO     | collected zombie processes
[2026-03-03 05:44:36] 2026-03-03 04:32:56,784 | INFO     | will attempt to kill all subprocesses of pid=1186415
[2026-03-03 05:44:36] 2026-03-03 04:32:57,460 | INFO     | process IDs to be killed: [1186415] (in reverse order)
[2026-03-03 05:44:36] 2026-03-03 04:32:57,730 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 05:44:36] 2026-03-03 04:32:57,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 05:44:36] 2026-03-03 04:32:57,755 | INFO     | did not find any defunct processes belonging to 1186415
[2026-03-03 05:44:36] 2026-03-03 04:32:57,777 | INFO     | did not find any defunct processes belonging to 1186415
[2026-03-03 05:44:36] 2026-03-03 04:32:57,777 | INFO     | ready for new job
[2026-03-03 05:44:36] 2026-03-03 04:32:57,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 05:44:36] 2026-03-03 04:32:57,780 | INFO     | **************************************
[2026-03-03 05:44:36] 2026-03-03 04:32:57,780 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 05:44:36] 2026-03-03 04:32:57,780 | INFO     | **************************************
[2026-03-03 05:44:36] 2026-03-03 04:32:57,780 | INFO     | 
[2026-03-03 05:44:36] 2026-03-03 04:32:57,788 | INFO     | architecture information:
[2026-03-03 05:44:36] 2026-03-03 04:32:57,788 | INFO     | executing command: cat /etc/os-release
[2026-03-03 05:44:36] 2026-03-03 04:32:57,808 | INFO     | cat /etc/os-release:
[2026-03-03 05:44:36] NAME="CentOS Linux"
[2026-03-03 05:44:36] VERSION="7 (Core)"
[2026-03-03 05:44:36] ID="centos"
[2026-03-03 05:44:36] ID_LIKE="rhel fedora"
[2026-03-03 05:44:36] VERSION_ID="7"
[2026-03-03 05:44:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 05:44:36] ANSI_COLOR="0;31"
[2026-03-03 05:44:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 05:44:36] HOME_URL="https://www.centos.org/"
[2026-03-03 05:44:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 05:44:36] 
[2026-03-03 05:44:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 05:44:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 05:44:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 05:44:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 05:44:36] 
[2026-03-03 05:44:36] 2026-03-03 04:32:57,808 | INFO     | **************************************
[2026-03-03 05:44:36] 2026-03-03 04:32:58,311 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-03-03 05:44:36] 2026-03-03 04:32:58,339 | INFO     | sufficient remaining disk space (3324881403904 B)
[2026-03-03 05:44:36] 2026-03-03 04:32:58,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 05:44:36] 2026-03-03 04:32:58,340 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 05:44:36] 2026-03-03 04:32:58,340 | INFO     | update_server=False
[2026-03-03 05:44:36] 2026-03-03 04:32:58,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 05:44:36] 2026-03-03 04:32:58,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:44:36] 2026-03-03 04:32:58,692 | INFO     | aborting loop
[2026-03-03 05:44:36] 2026-03-03 04:32:58,946 | INFO     | all data control threads have been joined
[2026-03-03 05:44:36] 2026-03-03 04:32:59,346 | INFO     | [job] retrieve thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:32:59,360 | INFO     | all payload control threads have been joined
[2026-03-03 05:44:36] 2026-03-03 04:32:59,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:32:59,517 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:32:59,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 05:44:36] 2026-03-03 04:32:59,693 | INFO     | [job] job monitor thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:32:59,762 | INFO     | all job control threads have been joined
[2026-03-03 05:44:36] 2026-03-03 04:32:59,879 | INFO     | [data] copytool_in thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:32:59,951 | INFO     | [data] control thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:32:59,995 | INFO     | [payload] failed_post thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:00,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 05:44:36] 2026-03-03 04:33:00,317 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:00,365 | INFO     | [payload] control thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:00,686 | INFO     | [job] validate thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:00,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:44:36] 2026-03-03 04:33:00,767 | INFO     | [job] control thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:00,813 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:00,926 | INFO     | [payload] validate_post thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:01,588 | INFO     | [data] copytool_out thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:01,750 | INFO     | [job] queue monitor thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:04,197 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 05:44:36] 2026-03-03 04:33:29,407 | INFO     | PID=1152390 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 05:44:36] 2026-03-03 04:33:29,410 | INFO     | .. there are 15 such processes running
[2026-03-03 05:44:36] 2026-03-03 04:33:29,411 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 05:44:36] 2026-03-03 04:33:29,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 05:44:36] 2026-03-03 04:33:29,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 05:44:36] 2026-03-03 04:33:33,547 | INFO     | [monitor] cgroup control has ended
[2026-03-03 05:44:36] 2026-03-03 04:33:35,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22904168765248)>', '<ExcThread(monitor, started 22903929448192)>']
[2026-03-03 05:44:36] 2026-03-03 04:33:35,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 05:44:36] 2026-03-03 04:33:35,441 | INFO     | [monitor] control thread has ended
[2026-03-03 05:44:36] 2026-03-03 04:33:40,126 | INFO     | all workflow threads have been joined
[2026-03-03 05:44:36] 2026-03-03 04:33:40,126 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 05:44:36] 2026-03-03 04:33:40,126 | INFO     | traces error code: 0
[2026-03-03 05:44:36] 2026-03-03 04:33:40,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 05:44:36] 2026-03-03 04:33:40,278 [wrapper] ==== pilot stdout END ====
[2026-03-03 05:44:36] 2026-03-03 04:33:40,284 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 05:44:36] 2026-03-03 04:33:40,288 [wrapper] pilotpid: 1152390
[2026-03-03 05:44:36] 2026-03-03 04:33:40,292 [wrapper] Pilot exit status: 0
[2026-03-03 05:44:36] 2026-03-03 04:33:40,308 [wrapper] pandaids: 7034055503
[2026-03-03 05:44:36] 2026-03-03 04:33:40,486 [wrapper] cleanup supervisor_pilot 1501468 1152391
[2026-03-03 05:44:36] 2026-03-03 04:33:40,491 [wrapper] Test setup, not cleaning
[2026-03-03 05:44:36] 2026-03-03 04:33:40,496 [wrapper] apfmon messages muted
[2026-03-03 05:44:36] 2026-03-03 04:33:40,500 [wrapper] ==== wrapper stdout END ====
[2026-03-03 05:44:36] 2026-03-03 04:33:40,504 [wrapper] ==== wrapper stderr END ====
[2026-03-03 05:44:36]  *** Error codes and diagnostics ***
[2026-03-03 05:44:36]     "exeErrorCode": 0,
[2026-03-03 05:44:36]     "exeErrorDiag": "",
[2026-03-03 05:44:36]     "pilotErrorCode": 0,
[2026-03-03 05:44:36]     "pilotErrorDiag": "",
[2026-03-03 05:44:36]  *** Listing of results directory ***
[2026-03-03 05:44:36] total 492364
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc    584627 Mar  1 01:35 pilot3.tar.gz
[2026-03-03 05:44:36] -rwx------ 1 boinc boinc     36322 Mar  1 01:38 runpilot2-wrapper.sh
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc      5111 Mar  1 01:40 queuedata.json
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc       100 Mar  3 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 05:44:36] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 02:13 run_atlas
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc       105 Mar  3 02:13 job.xml
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc      6698 Mar  3 02:13 init_data.xml
[2026-03-03 05:44:36] -rw-r--r-- 2 boinc boinc 298414226 Mar  3 02:13 EVNT.48787020._000014.pool.root.1
[2026-03-03 05:44:36] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:13 start_atlas.sh
[2026-03-03 05:44:36] drwxrwx--x 2 boinc boinc      4096 Mar  3 02:13 shared
[2026-03-03 05:44:36] -rw-r--r-- 2 boinc boinc    597978 Mar  3 02:13 input.tar.gz
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc         0 Mar  3 02:13 boinc_lockfile
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc      2599 Mar  3 02:13 pandaJob.out
[2026-03-03 05:44:36] -rw------- 1 boinc boinc    997722 Mar  3 02:14 agis_schedconf.cvmfs.json
[2026-03-03 05:44:36] -rw------- 1 boinc boinc       442 Mar  3 02:14 workernode_map.json
[2026-03-03 05:44:36] drwx------ 5 boinc boinc      4096 Mar  3 02:14 pilot3
[2026-03-03 05:44:36] -rw------- 1 boinc boinc 197769677 Mar  3 05:32 HITS.48787024._000303.pool.root.1
[2026-03-03 05:44:36] -rw------- 1 boinc boinc        95 Mar  3 05:32 pilot_heartbeat.json
[2026-03-03 05:44:36] -rw------- 1 boinc boinc      1028 Mar  3 05:32 memory_monitor_summary.json
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc       529 Mar  3 05:32 boinc_task_state.xml
[2026-03-03 05:44:36] -rw------- 1 boinc boinc   1512931 Mar  3 05:32 agis_ddmendpoints.agis.ALL.json
[2026-03-03 05:44:36] -rw------- 1 boinc boinc    375293 Mar  3 05:32 log.48787024._000303.job.log.tgz.1
[2026-03-03 05:44:36] -rw------- 1 boinc boinc      6346 Mar  3 05:32 heartbeat.json
[2026-03-03 05:44:36] -rw------- 1 boinc boinc      4832 Mar  3 05:33 pilotlog.txt
[2026-03-03 05:44:36] -rw------- 1 boinc boinc   1659818 Mar  3 05:33 log.48787024._000303.job.log.1
[2026-03-03 05:44:36] -rw------- 1 boinc boinc       357 Mar  3 05:33 output.list
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc       620 Mar  3 05:33 runtime_log
[2026-03-03 05:44:36] -rw------- 1 boinc boinc   2048000 Mar  3 05:33 result.tar.gz
[2026-03-03 05:44:36] -rw------- 1 boinc boinc       666 Mar  3 05:33 e4HMDmb0jG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIk6KDmHqRIXm.diag
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc      9205 Mar  3 05:33 runtime_log.err
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc        26 Mar  3 05:44 wrapper_checkpoint.txt
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc      8192 Mar  3 05:44 boinc_mmap_file
[2026-03-03 05:44:36] -rw-r--r-- 1 boinc boinc     21146 Mar  3 05:44 stderr.txt
[2026-03-03 05:44:36] HITS file was successfully produced:
[2026-03-03 05:44:36] -rw------- 1 boinc boinc 197769677 Mar  3 05:32 shared/HITS.pool.root.1
[2026-03-03 05:44:36]  *** Contents of shared directory: ***
[2026-03-03 05:44:36] total 487168
[2026-03-03 05:44:36] -rw-r--r-- 2 boinc boinc 298414226 Mar  3 02:13 ATLAS.root_0
[2026-03-03 05:44:36] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:13 start_atlas.sh
[2026-03-03 05:44:36] -rw-r--r-- 2 boinc boinc    597978 Mar  3 02:13 input.tar.gz
[2026-03-03 05:44:36] -rw------- 1 boinc boinc 197769677 Mar  3 05:32 HITS.pool.root.1
[2026-03-03 05:44:36] -rw------- 1 boinc boinc   2048000 Mar  3 05:33 result.tar.gz
05:44:37 (1131487): run_atlas exited; CPU time 47015.031224
05:44:37 (1131487): called boinc_finish(0)

</stderr_txt>
]]>

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