Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:58 (3289787): wrapper (7.7.26015): starting
13:34:58 (3289787): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 13:34:58] Arguments: --nthreads 4
[2026-03-01 13:34:58] Threads: 4
[2026-03-01 13:34:58] Checking for CVMFS
[2026-03-01 13:34:58] No cvmfs_config command found, will try listing directly
[2026-03-01 13:34:58] CVMFS is ok
[2026-03-01 13:34:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 13:34:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 13:34:58] Further information can be found at the LHC@home message board.
[2026-03-01 13:34:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 13:34:58] Checking for apptainer binary...
[2026-03-01 13:34:58] which: no apptainer in ((null))
[2026-03-01 13:34:58] apptainer is not installed, using version from CVMFS
[2026-03-01 13:34:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 13:34:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-01 13:34:58] apptainer works
[2026-03-01 13:34:58] Set ATHENA_PROC_NUMBER=4
[2026-03-01 13:34:58] Set ATHENA_CORE_NUMBER=4
[2026-03-01 13:34:58] Starting ATLAS job with PandaID=7033996880
[2026-03-01 13:34:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 15:16:27]  *** The last 200 lines of the pilot log: ***
[2026-03-01 15:16:27]  filetype=log
[2026-03-01 15:16:27]  guid=15e8a84e-95e2-4a70-869d-58ebae592094
[2026-03-01 15:16:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-01 15:16:27]  is_altstaged=None
[2026-03-01 15:16:27]  is_tar=False
[2026-03-01 15:16:27]  lfn=log.48838581._003147.job.log.tgz.1
[2026-03-01 15:16:27]  mtime=0
[2026-03-01 15:16:27]  protocol_id=None
[2026-03-01 15:16:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 15:16:27]  replicas=None
[2026-03-01 15:16:27]  scope=mc23_13p6TeV
[2026-03-01 15:16:27]  status=None
[2026-03-01 15:16:27]  status_code=0
[2026-03-01 15:16:27]  storage_token=
[2026-03-01 15:16:27]  surl=/var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7033996880/log.48838581._003147.job.log.tgz.1
[2026-03-01 15:16:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/2d/log.48838581._003147.job.log.tgz.1
[2026-03-01 15:16:27]  workdir=None
[2026-03-01 15:16:27] ]
[2026-03-01 15:16:27] 2026-03-01 14:15:46,158 | INFO     | transferring file log.48838581._003147.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7033996880/log.48838581._003147.job.log.tgz.1 to /var/lib/
[2026-03-01 15:16:27] 2026-03-01 14:15:46,159 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7033996880/log.48838581._003147.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/0/
[2026-03-01 15:16:27] 2026-03-01 14:15:46,175 | INFO     | adding to output.list: log.48838581._003147.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/2d/log.48838581._003147.job.log.tg
[2026-03-01 15:16:27] 2026-03-01 14:15:46,176 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 15:16:27] 2026-03-01 14:15:46,176 | INFO     | summary of transferred files:
[2026-03-01 15:16:27] 2026-03-01 14:15:46,176 | INFO     |  -- lfn=log.48838581._003147.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 15:16:27] 2026-03-01 14:15:46,176 | INFO     | stage-out finished correctly
[2026-03-01 15:16:27] 2026-03-01 14:15:46,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 15:16:27] 2026-03-01 14:15:47,919 | INFO     | time since job start (6036s) is within the limit (349056.0s)
[2026-03-01 15:16:27] 2026-03-01 14:15:48,086 | INFO     | monitor loop #436: job 0:7033996880 is in state 'finished'
[2026-03-01 15:16:27] 2026-03-01 14:15:48,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,479 | INFO     | job 7033996880 has state=finished
[2026-03-01 15:16:27] 2026-03-01 14:15:49,479 | INFO     | preparing for final server update for job 7033996880 in state='finished'
[2026-03-01 15:16:27] 2026-03-01 14:15:49,479 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7033996880/jobReport.json
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/0/workernode_map.json
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | INFO     | this job has now completed (state=finished)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | INFO     | log transfer has been attempted: DONE
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | INFO     | job 7033996880 has finished - writing final server update
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16292/.job.ad'
[2026-03-01 15:16:27] 2026-03-01 14:15:49,481 | INFO     | total number of processed events: 400 (read)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,500 | INFO     | using path: /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7033996880/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,500 | INFO     | extracted standard info from prmon json
[2026-03-01 15:16:27] 2026-03-01 14:15:49,500 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 15:16:27] 2026-03-01 14:15:49,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 15:16:27] 2026-03-01 14:15:49,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 15:16:27] 2026-03-01 14:15:49,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | fitting pss+swap vs Time
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | sum of square deviations: 241429643.0
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | sum of deviations: -117903239.99999999
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | mean x: 1772371612.5
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | mean y: 2355279.3260869565
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | intersect: 867900839.5196813
[2026-03-01 15:16:27] 2026-03-01 14:15:49,502 | INFO     | chi2: 0.0004261313882229587
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | current memory leak: -0.49 B/s (using 92 data points, chi2=0.00)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | could have reported an average CPU frequency of 3549 MHz (7 samples)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | ..............................
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . Timing measurements:
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . get job = 0 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . initial setup = 5 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . payload setup = 5 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . stage-in = 0 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . payload execution = 6014 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . stage-out = 0 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | . log creation = 0 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,503 | INFO     | ..............................
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | 
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | job summary report
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | --------------------------------------------------
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | PanDA job id: 7033996880
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | task id: 48838581
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | errors: (none)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | pilot state: finished 
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | transexitcode: 0
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | exeerrorcode: 0
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | exeerrordiag: 
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | exitcode: 0
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | exitmsg: OK
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | cpuconsumptiontime: 23059 s
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | nevents: 400
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | neventsw: 0
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | pid: 3306952
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | pgrp: 3306952
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | corecount: 4
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | event service: False
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | sizes: {0: 2281879, 1: 2282340, 11: 2282340, 6023: 2309104, 6024: 2318182, 6027: 2318320}
[2026-03-01 15:16:27] 2026-03-01 14:15:49,553 | INFO     | --------------------------------------------------
[2026-03-01 15:16:27] 2026-03-01 14:15:49,554 | INFO     | 
[2026-03-01 15:16:27] 2026-03-01 14:15:49,554 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/0
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | job 7033996880 has completed (purged errors)
[2026-03-01 15:16:27] 2026-03-01 14:15:49,575 | INFO     | overall cleanup function is called
[2026-03-01 15:16:27] 2026-03-01 14:15:50,581 | INFO     | --- collectZombieJob: --- 10, [3306952]
[2026-03-01 15:16:27] 2026-03-01 14:15:50,582 | INFO     | zombie collector waiting for pid 3306952
[2026-03-01 15:16:27] 2026-03-01 14:15:50,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 15:16:27] 2026-03-01 14:15:50,582 | INFO     | collected zombie processes
[2026-03-01 15:16:27] 2026-03-01 14:15:50,582 | INFO     | will attempt to kill all subprocesses of pid=3306952
[2026-03-01 15:16:27] 2026-03-01 14:15:51,041 | INFO     | process IDs to be killed: [3306952] (in reverse order)
[2026-03-01 15:16:27] 2026-03-01 14:15:51,284 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 15:16:27] 2026-03-01 14:15:51,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 15:16:27] 2026-03-01 14:15:51,315 | INFO     | did not find any defunct processes belonging to 3306952
[2026-03-01 15:16:27] 2026-03-01 14:15:51,345 | INFO     | did not find any defunct processes belonging to 3306952
[2026-03-01 15:16:27] 2026-03-01 14:15:51,345 | INFO     | ready for new job
[2026-03-01 15:16:27] 2026-03-01 14:15:51,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 15:16:27] 2026-03-01 14:15:51,346 | INFO     | **************************************
[2026-03-01 15:16:27] 2026-03-01 14:15:51,346 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 15:16:27] 2026-03-01 14:15:51,346 | INFO     | **************************************
[2026-03-01 15:16:27] 2026-03-01 14:15:51,346 | INFO     | 
[2026-03-01 15:16:27] 2026-03-01 14:15:51,353 | INFO     | architecture information:
[2026-03-01 15:16:27] 2026-03-01 14:15:51,354 | INFO     | executing command: cat /etc/os-release
[2026-03-01 15:16:27] 2026-03-01 14:15:51,369 | INFO     | cat /etc/os-release:
[2026-03-01 15:16:27] NAME="CentOS Linux"
[2026-03-01 15:16:27] VERSION="7 (Core)"
[2026-03-01 15:16:27] ID="centos"
[2026-03-01 15:16:27] ID_LIKE="rhel fedora"
[2026-03-01 15:16:27] VERSION_ID="7"
[2026-03-01 15:16:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 15:16:27] ANSI_COLOR="0;31"
[2026-03-01 15:16:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 15:16:27] HOME_URL="https://www.centos.org/"
[2026-03-01 15:16:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 15:16:27] 
[2026-03-01 15:16:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 15:16:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 15:16:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 15:16:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 15:16:27] 
[2026-03-01 15:16:27] 2026-03-01 14:15:51,369 | INFO     | **************************************
[2026-03-01 15:16:27] 2026-03-01 14:15:51,872 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/0
[2026-03-01 15:16:27] 2026-03-01 14:15:51,889 | INFO     | sufficient remaining disk space (83601915904 B)
[2026-03-01 15:16:27] 2026-03-01 14:15:51,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 15:16:27] 2026-03-01 14:15:51,889 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 15:16:27] 2026-03-01 14:15:51,889 | INFO     | update_server=False
[2026-03-01 15:16:27] 2026-03-01 14:15:51,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 15:16:27] 2026-03-01 14:15:51,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 15:16:27] 2026-03-01 14:15:51,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 15:16:27] 2026-03-01 14:15:51,890 | INFO     | aborting loop
[2026-03-01 15:16:27] 2026-03-01 14:15:52,192 | INFO     | all payload control threads have been joined
[2026-03-01 15:16:27] 2026-03-01 14:15:52,289 | INFO     | all data control threads have been joined
[2026-03-01 15:16:27] 2026-03-01 14:15:52,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 15:16:27] 2026-03-01 14:15:52,894 | INFO     | [job] retrieve thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:52,896 | INFO     | [job] job monitor thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:52,995 | INFO     | all job control threads have been joined
[2026-03-01 15:16:27] 2026-03-01 14:15:53,033 | INFO     | [payload] validate_post thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,196 | INFO     | [job] validate thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,197 | INFO     | [payload] control thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,295 | INFO     | [data] control thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,667 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,715 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,804 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,866 | INFO     | [data] copytool_in thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:53,895 | INFO     | [data] copytool_out thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:54,000 | INFO     | [job] control thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:54,112 | INFO     | [payload] failed_post thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:54,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 15:16:27] 2026-03-01 14:15:55,567 | INFO     | [job] queue monitor thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:15:56,744 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:16:02,835 | INFO     | job.realtimelogging is not enabled
[2026-03-01 15:16:27] 2026-03-01 14:16:03,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 15:16:27] 2026-03-01 14:16:21,017 | INFO     | [monitor] cgroup control has ended
[2026-03-01 15:16:27] 2026-03-01 14:16:21,563 | INFO     | PID=3301052 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 15:16:27] 2026-03-01 14:16:21,563 | INFO     | .. there are 50 such processes running
[2026-03-01 15:16:27] 2026-03-01 14:16:21,564 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 15:16:27] 2026-03-01 14:16:21,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 15:16:27] 2026-03-01 14:16:21,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 15:16:27] 2026-03-01 14:16:21,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22483438081856)>', '<ExcThread(monitor, started 22483190408960)>']
[2026-03-01 15:16:27] 2026-03-01 14:16:22,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 15:16:27] 2026-03-01 14:16:22,569 | INFO     | [monitor] control thread has ended
[2026-03-01 15:16:27] 2026-03-01 14:16:26,911 | INFO     | all workflow threads have been joined
[2026-03-01 15:16:27] 2026-03-01 14:16:26,912 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 15:16:27] 2026-03-01 14:16:26,912 | INFO     | traces error code: 0
[2026-03-01 15:16:27] 2026-03-01 14:16:26,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 15:16:27] 2026-03-01 14:16:27,119 [wrapper] ==== pilot stdout END ====
[2026-03-01 15:16:27] 2026-03-01 14:16:27,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 15:16:27] 2026-03-01 14:16:27,125 [wrapper] pilotpid: 3301052
[2026-03-01 15:16:27] 2026-03-01 14:16:27,127 [wrapper] Pilot exit status: 0
[2026-03-01 15:16:27] 2026-03-01 14:16:27,138 [wrapper] pandaids: 7033996880
[2026-03-01 15:16:27] 2026-03-01 14:16:27,265 [wrapper] cleanup supervisor_pilot   29564 3301053
[2026-03-01 15:16:27] 2026-03-01 14:16:27,269 [wrapper] Test setup, not cleaning
[2026-03-01 15:16:27] 2026-03-01 14:16:27,274 [wrapper] apfmon messages muted
[2026-03-01 15:16:27] 2026-03-01 14:16:27,277 [wrapper] ==== wrapper stdout END ====
[2026-03-01 15:16:27] 2026-03-01 14:16:27,280 [wrapper] ==== wrapper stderr END ====
[2026-03-01 15:16:27]  *** Error codes and diagnostics ***
[2026-03-01 15:16:27]     "exeErrorCode": 0,
[2026-03-01 15:16:27]     "exeErrorDiag": "",
[2026-03-01 15:16:27]     "pilotErrorCode": 0,
[2026-03-01 15:16:27]     "pilotErrorDiag": "",
[2026-03-01 15:16:27]  *** Listing of results directory ***
[2026-03-01 15:16:27] total 503484
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc    602657 Feb  3 12:11 pilot3.tar.gz
[2026-03-01 15:16:27] -rwx------. 1 boinc boinc     36322 Feb 28 23:59 runpilot2-wrapper.sh
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc      5111 Mar  1 00:02 queuedata.json
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc       100 Mar  1 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 15:16:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 13:34 run_atlas
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc       105 Mar  1 13:34 job.xml
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc      6703 Mar  1 13:34 init_data.xml
[2026-03-01 15:16:27] -rw-r--r--. 2 boinc boinc 284502087 Mar  1 13:34 EVNT.48220205._000136.pool.root.1
[2026-03-01 15:16:27] -rw-r--r--. 2 boinc boinc     15845 Mar  1 13:34 start_atlas.sh
[2026-03-01 15:16:27] drwxrwx--x. 2 boinc boinc      4096 Mar  1 13:34 shared
[2026-03-01 15:16:27] -rw-r--r--. 2 boinc boinc    616324 Mar  1 13:34 input.tar.gz
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc         0 Mar  1 13:34 boinc_lockfile
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc      2588 Mar  1 13:34 pandaJob.out
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc    998184 Mar  1 13:35 agis_schedconf.cvmfs.json
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc   1513015 Mar  1 13:35 agis_ddmendpoints.agis.ALL.json
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc       445 Mar  1 13:35 workernode_map.json
[2026-03-01 15:16:27] drwx------. 7 boinc boinc      4096 Mar  1 13:35 pilot3
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc 224768049 Mar  1 15:15 HITS.48838581._003147.pool.root.1
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc      1033 Mar  1 15:15 memory_monitor_summary.json
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc       529 Mar  1 15:15 boinc_task_state.xml
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc    287888 Mar  1 15:15 log.48838581._003147.job.log.tgz.1
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc      6351 Mar  1 15:15 heartbeat.json
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc      8192 Mar  1 15:16 boinc_mmap_file
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc        27 Mar  1 15:16 wrapper_checkpoint.txt
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc        95 Mar  1 15:16 pilot_heartbeat.json
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc      4902 Mar  1 15:16 pilotlog.txt
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc    875516 Mar  1 15:16 log.48838581._003147.job.log.1
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc       357 Mar  1 15:16 output.list
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc       620 Mar  1 15:16 runtime_log
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc   1177600 Mar  1 15:16 result.tar.gz
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc      9221 Mar  1 15:16 runtime_log.err
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc       663 Mar  1 15:16 dxwLDmTSiG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTc6KDmU0e5Qo.diag
[2026-03-01 15:16:27] -rw-r--r--. 1 boinc boinc     21152 Mar  1 15:16 stderr.txt
[2026-03-01 15:16:27] HITS file was successfully produced:
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc 224768049 Mar  1 15:15 shared/HITS.pool.root.1
[2026-03-01 15:16:27]  *** Contents of shared directory: ***
[2026-03-01 15:16:27] total 499120
[2026-03-01 15:16:27] -rw-r--r--. 2 boinc boinc 284502087 Mar  1 13:34 ATLAS.root_0
[2026-03-01 15:16:27] -rw-r--r--. 2 boinc boinc     15845 Mar  1 13:34 start_atlas.sh
[2026-03-01 15:16:27] -rw-r--r--. 2 boinc boinc    616324 Mar  1 13:34 input.tar.gz
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc 224768049 Mar  1 15:15 HITS.pool.root.1
[2026-03-01 15:16:27] -rw-------. 1 boinc boinc   1177600 Mar  1 15:16 result.tar.gz
15:16:28 (3289787): run_atlas exited; CPU time 23324.234246
15:16:28 (3289787): called boinc_finish(0)

</stderr_txt>
]]>

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