Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:32:29 (1417378): wrapper (7.7.26015): starting
10:32:29 (1417378): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 10:32:29] Arguments: --nthreads 4
[2026-03-01 10:32:29] Threads: 4
[2026-03-01 10:32:29] Checking for CVMFS
[2026-03-01 10:32:29] No cvmfs_config command found, will try listing directly
[2026-03-01 10:32:29] CVMFS is ok
[2026-03-01 10:32:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 10:32:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 10:32:29] Further information can be found at the LHC@home message board.
[2026-03-01 10:32:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 10:32:29] Checking for apptainer binary...
[2026-03-01 10:32:29] which: no apptainer in ((null))
[2026-03-01 10:32:29] apptainer is not installed, using version from CVMFS
[2026-03-01 10:32:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 10:32:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-01 10:32:29] apptainer works
[2026-03-01 10:32:29] Set ATHENA_PROC_NUMBER=4
[2026-03-01 10:32:29] Set ATHENA_CORE_NUMBER=4
[2026-03-01 10:32:29] Starting ATLAS job with PandaID=7034065416
[2026-03-01 10:32:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 12:12:58]  *** The last 200 lines of the pilot log: ***
[2026-03-01 12:12:58]  is_altstaged=None
[2026-03-01 12:12:58]  is_tar=False
[2026-03-01 12:12:58]  lfn=log.48838620._001524.job.log.tgz.1
[2026-03-01 12:12:58]  mtime=0
[2026-03-01 12:12:58]  protocol_id=None
[2026-03-01 12:12:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 12:12:58]  replicas=None
[2026-03-01 12:12:58]  scope=mc23_13p6TeV
[2026-03-01 12:12:58]  status=None
[2026-03-01 12:12:58]  status_code=0
[2026-03-01 12:12:58]  storage_token=
[2026-03-01 12:12:58]  surl=/var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034065416/log.48838620._001524.job.log.tgz.1
[2026-03-01 12:12:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/59/log.48838620._001524.job.log.tgz.1
[2026-03-01 12:12:58]  workdir=None
[2026-03-01 12:12:58] ]
[2026-03-01 12:12:58] 2026-03-01 11:11:45,475 | INFO     | transferring file log.48838620._001524.job.log.tgz.1 from /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034065416/log.48838620._001524.job.log.tgz.1 to /var/lib/b
[2026-03-01 12:12:58] 2026-03-01 11:11:45,476 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034065416/log.48838620._001524.job.log.tgz.1 /var/lib/boinc/var/slot68/slots/0/lo
[2026-03-01 12:12:58] 2026-03-01 11:11:45,490 | INFO     | adding to output.list: log.48838620._001524.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/59/log.48838620._001524.job.log.tg
[2026-03-01 12:12:58] 2026-03-01 11:11:45,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 12:12:58] 2026-03-01 11:11:45,491 | INFO     | summary of transferred files:
[2026-03-01 12:12:58] 2026-03-01 11:11:45,491 | INFO     |  -- lfn=log.48838620._001524.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 12:12:58] 2026-03-01 11:11:45,491 | INFO     | stage-out finished correctly
[2026-03-01 12:12:58] 2026-03-01 11:11:45,570 | INFO     | time since job start (5944s) is within the limit (349056.0s)
[2026-03-01 12:12:58] 2026-03-01 11:11:46,524 | INFO     | monitor loop #426: job 0:7034065416 is in state 'finished'
[2026-03-01 12:12:58] 2026-03-01 11:11:46,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 12:12:58] 2026-03-01 11:11:47,576 | INFO     | time since job start (5946s) is within the limit (349056.0s)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,364 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 12:12:58] 2026-03-01 11:11:48,932 | INFO     | job 7034065416 has state=finished
[2026-03-01 12:12:58] 2026-03-01 11:11:48,932 | INFO     | preparing for final server update for job 7034065416 in state='finished'
[2026-03-01 12:12:58] 2026-03-01 11:11:48,932 | INFO     | reading metadata from: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034065416/jobReport.json
[2026-03-01 12:12:58] 2026-03-01 11:11:48,934 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot68/slots/0/workernode_map.json
[2026-03-01 12:12:58] 2026-03-01 11:11:48,934 | INFO     | this job has now completed (state=finished)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,934 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,934 | INFO     | log transfer has been attempted: DONE
[2026-03-01 12:12:58] 2026-03-01 11:11:48,935 | INFO     | job 7034065416 has finished - writing final server update
[2026-03-01 12:12:58] 2026-03-01 11:11:48,935 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16212/.job.ad'
[2026-03-01 12:12:58] 2026-03-01 11:11:48,935 | INFO     | total number of processed events: 400 (read)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,953 | INFO     | using path: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034065416/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,953 | INFO     | extracted standard info from prmon json
[2026-03-01 12:12:58] 2026-03-01 11:11:48,953 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 12:12:58] 2026-03-01 11:11:48,954 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 12:12:58] 2026-03-01 11:11:48,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 12:12:58] 2026-03-01 11:11:48,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 12:12:58] 2026-03-01 11:11:48,955 | INFO     | fitting pss+swap vs Time
[2026-03-01 12:12:58] 2026-03-01 11:11:48,955 | INFO     | sum of square deviations: 233641590.0
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | sum of deviations: -633924809.9999998
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | mean x: 1772360632.0
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | mean y: 2354572.7802197803
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | intersect: 4811187524.533713
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | chi2: 0.0006430668373765444
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | current memory leak: -2.71 B/s (using 91 data points, chi2=0.00)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | could have reported an average CPU frequency of 3578 MHz (7 samples)
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | ..............................
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . Timing measurements:
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . get job = 0 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . initial setup = 4 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . payload setup = 5 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . stage-in = 0 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . payload execution = 5923 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . stage-out = 0 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,956 | INFO     | . log creation = 0 s
[2026-03-01 12:12:58] 2026-03-01 11:11:48,957 | INFO     | ..............................
[2026-03-01 12:12:58] 2026-03-01 11:11:49,008 | INFO     | 
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | job summary report
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | --------------------------------------------------
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | PanDA job id: 7034065416
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | task id: 48838620
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | errors: (none)
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | pilot state: finished 
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | transexitcode: 0
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | exeerrorcode: 0
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | exeerrordiag: 
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | exitcode: 0
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | exitmsg: OK
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | cpuconsumptiontime: 22729 s
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | nevents: 400
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | neventsw: 0
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | pid: 1427770
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | pgrp: 1427770
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | corecount: 4
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | event service: False
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | sizes: {0: 2281750, 1: 2282211, 11: 2282211, 5933: 2318013, 5936: 2318013, 5937: 2318207}
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | --------------------------------------------------
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | 
[2026-03-01 12:12:58] 2026-03-01 11:11:49,009 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/0
[2026-03-01 12:12:58] 2026-03-01 11:11:49,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 12:12:58] 2026-03-01 11:11:49,028 | INFO     | job 7034065416 has completed (purged errors)
[2026-03-01 12:12:58] 2026-03-01 11:11:49,028 | INFO     | overall cleanup function is called
[2026-03-01 12:12:58] 2026-03-01 11:11:50,035 | INFO     | --- collectZombieJob: --- 10, [1427770]
[2026-03-01 12:12:58] 2026-03-01 11:11:50,035 | INFO     | zombie collector waiting for pid 1427770
[2026-03-01 12:12:58] 2026-03-01 11:11:50,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 12:12:58] 2026-03-01 11:11:50,035 | INFO     | collected zombie processes
[2026-03-01 12:12:58] 2026-03-01 11:11:50,035 | INFO     | will attempt to kill all subprocesses of pid=1427770
[2026-03-01 12:12:58] 2026-03-01 11:11:50,503 | INFO     | process IDs to be killed: [1427770] (in reverse order)
[2026-03-01 12:12:58] 2026-03-01 11:11:50,736 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 12:12:58] 2026-03-01 11:11:50,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 12:12:58] 2026-03-01 11:11:50,765 | INFO     | did not find any defunct processes belonging to 1427770
[2026-03-01 12:12:58] 2026-03-01 11:11:50,793 | INFO     | did not find any defunct processes belonging to 1427770
[2026-03-01 12:12:58] 2026-03-01 11:11:50,793 | INFO     | ready for new job
[2026-03-01 12:12:58] 2026-03-01 11:11:50,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 12:12:58] 2026-03-01 11:11:50,795 | INFO     | **************************************
[2026-03-01 12:12:58] 2026-03-01 11:11:50,795 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 12:12:58] 2026-03-01 11:11:50,795 | INFO     | **************************************
[2026-03-01 12:12:58] 2026-03-01 11:11:50,795 | INFO     | 
[2026-03-01 12:12:58] 2026-03-01 11:11:50,801 | INFO     | architecture information:
[2026-03-01 12:12:58] 2026-03-01 11:11:50,802 | INFO     | executing command: cat /etc/os-release
[2026-03-01 12:12:58] 2026-03-01 11:11:50,815 | INFO     | cat /etc/os-release:
[2026-03-01 12:12:58] NAME="CentOS Linux"
[2026-03-01 12:12:58] VERSION="7 (Core)"
[2026-03-01 12:12:58] ID="centos"
[2026-03-01 12:12:58] ID_LIKE="rhel fedora"
[2026-03-01 12:12:58] VERSION_ID="7"
[2026-03-01 12:12:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 12:12:58] ANSI_COLOR="0;31"
[2026-03-01 12:12:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 12:12:58] HOME_URL="https://www.centos.org/"
[2026-03-01 12:12:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 12:12:58] 
[2026-03-01 12:12:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 12:12:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 12:12:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 12:12:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 12:12:58] 
[2026-03-01 12:12:58] 2026-03-01 11:11:50,815 | INFO     | **************************************
[2026-03-01 12:12:58] 2026-03-01 11:11:51,318 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/0
[2026-03-01 12:12:58] 2026-03-01 11:11:51,334 | INFO     | sufficient remaining disk space (212117487616 B)
[2026-03-01 12:12:58] 2026-03-01 11:11:51,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 12:12:58] 2026-03-01 11:11:51,335 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 12:12:58] 2026-03-01 11:11:51,335 | INFO     | update_server=False
[2026-03-01 12:12:58] 2026-03-01 11:11:51,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 12:12:58] 2026-03-01 11:11:51,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 12:12:58] 2026-03-01 11:11:51,530 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 12:12:58] 2026-03-01 11:11:51,530 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 12:12:58] 2026-03-01 11:11:51,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 12:12:58] 2026-03-01 11:11:51,530 | INFO     | will abort loop
[2026-03-01 12:12:58] 2026-03-01 11:11:51,620 | INFO     | all data control threads have been joined
[2026-03-01 12:12:58] 2026-03-01 11:11:51,718 | INFO     | all job control threads have been joined
[2026-03-01 12:12:58] 2026-03-01 11:11:51,997 | INFO     | all payload control threads have been joined
[2026-03-01 12:12:58] 2026-03-01 11:11:52,340 | INFO     | [job] retrieve thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,383 | INFO     | [job] validate thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,428 | INFO     | [payload] validate_post thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,535 | INFO     | [job] job monitor thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,593 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,625 | INFO     | [data] control thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,689 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,723 | INFO     | [job] control thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,749 | INFO     | [data] copytool_in thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:52,900 | INFO     | [payload] failed_post thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:53,002 | INFO     | [payload] control thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:53,340 | INFO     | [data] copytool_out thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:53,480 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:54,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 12:12:58] 2026-03-01 11:11:54,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 12:12:58] 2026-03-01 11:11:55,024 | INFO     | [job] queue monitor thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:11:58,425 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:12:01,718 | INFO     | job.realtimelogging is not enabled
[2026-03-01 12:12:58] 2026-03-01 11:12:02,723 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 12:12:58] 2026-03-01 11:12:21,235 | INFO     | PID=1421940 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 12:12:58] 2026-03-01 11:12:21,235 | INFO     | .. there are 50 such processes running
[2026-03-01 12:12:58] 2026-03-01 11:12:21,236 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 12:12:58] 2026-03-01 11:12:21,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 12:12:58] 2026-03-01 11:12:21,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 12:12:58] 2026-03-01 11:12:51,110 | INFO     | [monitor] cgroup control has ended
[2026-03-01 12:12:58] 2026-03-01 11:12:53,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22878759274304)>', '<ExcThread(monitor, started 22878511953664)>']
[2026-03-01 12:12:58] 2026-03-01 11:12:53,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 12:12:58] 2026-03-01 11:12:53,397 | INFO     | [monitor] control thread has ended
[2026-03-01 12:12:58] 2026-03-01 11:12:58,192 | INFO     | all workflow threads have been joined
[2026-03-01 12:12:58] 2026-03-01 11:12:58,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 12:12:58] 2026-03-01 11:12:58,192 | INFO     | traces error code: 0
[2026-03-01 12:12:58] 2026-03-01 11:12:58,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 12:12:58] 2026-03-01 11:12:58,340 [wrapper] ==== pilot stdout END ====
[2026-03-01 12:12:58] 2026-03-01 11:12:58,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 12:12:58] 2026-03-01 11:12:58,346 [wrapper] pilotpid: 1421940
[2026-03-01 12:12:58] 2026-03-01 11:12:58,349 [wrapper] Pilot exit status: 0
[2026-03-01 12:12:58] 2026-03-01 11:12:58,360 [wrapper] pandaids: 7034065416
[2026-03-01 12:12:58] 2026-03-01 11:12:58,491 [wrapper] cleanup supervisor_pilot 2170244 1421941
[2026-03-01 12:12:58] 2026-03-01 11:12:58,494 [wrapper] Test setup, not cleaning
[2026-03-01 12:12:58] 2026-03-01 11:12:58,496 [wrapper] apfmon messages muted
[2026-03-01 12:12:58] 2026-03-01 11:12:58,498 [wrapper] ==== wrapper stdout END ====
[2026-03-01 12:12:58] 2026-03-01 11:12:58,500 [wrapper] ==== wrapper stderr END ====
[2026-03-01 12:12:58]  *** Error codes and diagnostics ***
[2026-03-01 12:12:58]     "exeErrorCode": 0,
[2026-03-01 12:12:58]     "exeErrorDiag": "",
[2026-03-01 12:12:58]     "pilotErrorCode": 0,
[2026-03-01 12:12:58]     "pilotErrorDiag": "",
[2026-03-01 12:12:58]  *** Listing of results directory ***
[2026-03-01 12:12:58] total 472572
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc    584627 Mar  1 01:35 pilot3.tar.gz
[2026-03-01 12:12:58] -rwx------. 1 boinc boinc     36322 Mar  1 01:35 runpilot2-wrapper.sh
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc      5111 Mar  1 01:36 queuedata.json
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc       100 Mar  1 10:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 12:12:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 10:32 run_atlas
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc       105 Mar  1 10:32 job.xml
[2026-03-01 12:12:58] -rw-r--r--. 2 boinc boinc     15845 Mar  1 10:32 start_atlas.sh
[2026-03-01 12:12:58] drwxrwx--x. 2 boinc boinc      4096 Mar  1 10:32 shared
[2026-03-01 12:12:58] -rw-r--r--. 2 boinc boinc    597980 Mar  1 10:32 input.tar.gz
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc      6701 Mar  1 10:32 init_data.xml
[2026-03-01 12:12:58] -rw-r--r--. 2 boinc boinc 271808629 Mar  1 10:32 EVNT.48343799._000014.pool.root.1
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc         0 Mar  1 10:32 boinc_lockfile
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc      2563 Mar  1 10:32 pandaJob.out
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc    998198 Mar  1 10:32 agis_schedconf.cvmfs.json
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc   1513015 Mar  1 10:32 agis_ddmendpoints.agis.ALL.json
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc       443 Mar  1 10:32 workernode_map.json
[2026-03-01 12:12:58] drwx------. 5 boinc boinc      4096 Mar  1 10:32 pilot3
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc 205879952 Mar  1 12:11 HITS.48838620._001524.pool.root.1
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc      1031 Mar  1 12:11 memory_monitor_summary.json
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc    289575 Mar  1 12:11 log.48838620._001524.job.log.tgz.1
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc       529 Mar  1 12:11 boinc_task_state.xml
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc      6349 Mar  1 12:11 heartbeat.json
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc        95 Mar  1 12:12 pilot_heartbeat.json
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc      8192 Mar  1 12:12 boinc_mmap_file
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc        27 Mar  1 12:12 wrapper_checkpoint.txt
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc      5088 Mar  1 12:12 pilotlog.txt
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc    856897 Mar  1 12:12 log.48838620._001524.job.log.1
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc       357 Mar  1 12:12 output.list
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc       620 Mar  1 12:12 runtime_log
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc   1167360 Mar  1 12:12 result.tar.gz
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc       662 Mar  1 12:12 x5TMDmyxjG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmS8KDma07Lem.diag
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc      9204 Mar  1 12:12 runtime_log.err
[2026-03-01 12:12:58] -rw-r--r--. 1 boinc boinc     21317 Mar  1 12:12 stderr.txt
[2026-03-01 12:12:58] HITS file was successfully produced:
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc 205879952 Mar  1 12:11 shared/HITS.pool.root.1
[2026-03-01 12:12:58]  *** Contents of shared directory: ***
[2026-03-01 12:12:58] total 468244
[2026-03-01 12:12:58] -rw-r--r--. 2 boinc boinc     15845 Mar  1 10:32 start_atlas.sh
[2026-03-01 12:12:58] -rw-r--r--. 2 boinc boinc    597980 Mar  1 10:32 input.tar.gz
[2026-03-01 12:12:58] -rw-r--r--. 2 boinc boinc 271808629 Mar  1 10:32 ATLAS.root_0
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc 205879952 Mar  1 12:11 HITS.pool.root.1
[2026-03-01 12:12:58] -rw-------. 1 boinc boinc   1167360 Mar  1 12:12 result.tar.gz
12:13:00 (1417378): run_atlas exited; CPU time 23006.913227
12:13:00 (1417378): called boinc_finish(0)

</stderr_txt>
]]>

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