Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:43 (508510): wrapper (7.7.26015): starting
00:02:43 (508510): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 00:02:43] Arguments: --nthreads 8
[2026-03-01 00:02:43] Threads: 8
[2026-03-01 00:02:43] Checking for CVMFS
[2026-03-01 00:02:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 00:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 00:02:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 00:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 00:02:47] 2.13.3.0 8602 166319 656608 156757 2 54 16477810 21042177 23647 16776704 0 583077300 99.383 897612513 33055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-01 00:02:47] CVMFS is ok
[2026-03-01 00:02:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 00:02:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 00:02:47] Further information can be found at the LHC@home message board.
[2026-03-01 00:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 00:02:47] Checking for apptainer binary...
[2026-03-01 00:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 00:02:47] Running /usr/bin/apptainer --version
[2026-03-01 00:02:48] apptainer version 1.4.5-2.el9
[2026-03-01 00:02:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 00:02:49] c-16-16.aglt2.org
[2026-03-01 00:02:49] apptainer works
[2026-03-01 00:02:49] Set ATHENA_PROC_NUMBER=8
[2026-03-01 00:02:49] Set ATHENA_CORE_NUMBER=8
[2026-03-01 00:02:50] Starting ATLAS job with PandaID=7034083178
[2026-03-01 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 21:26:09]  *** The last 200 lines of the pilot log: ***
[2026-03-02 21:26:09] 2026-03-02 11:29:02,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:26:09] 2026-03-02 11:29:03,109 | INFO     | fitting pss+swap vs Time
[2026-03-02 21:26:09] 2026-03-02 11:29:03,288 | INFO     | sum of square deviations: 1784356984577.457
[2026-03-02 21:26:09] 2026-03-02 11:29:05,312 | INFO     | time since job start (109439s) is within the limit (349056.0s)
[2026-03-02 21:26:09] 2026-03-02 11:29:06,083 | INFO     | monitor loop #3500: job 0:7034083178 is in state 'finished'
[2026-03-02 21:26:09] 2026-03-02 11:29:06,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:26:09] 2026-03-02 11:29:08,691 | INFO     | sum of deviations: 1881146223695.9004
[2026-03-02 21:26:09] 2026-03-02 11:29:08,691 | INFO     | mean x: 1772396262.3320312
[2026-03-02 21:26:09] 2026-03-02 11:29:08,692 | INFO     | mean y: 2473133.8219866073
[2026-03-02 21:26:09] 2026-03-02 11:29:08,692 | INFO     | intersect: -1866063579.7371368
[2026-03-02 21:26:09] 2026-03-02 11:29:08,746 | INFO     | chi2: 6.80041452045689
[2026-03-02 21:26:09] 2026-03-02 11:29:08,749 | INFO     | sum of square deviations: 1769463013932.9573
[2026-03-02 21:26:09] 2026-03-02 11:29:09,336 | INFO     | sum of deviations: 2102939115396.89
[2026-03-02 21:26:09] 2026-03-02 11:29:09,337 | INFO     | mean x: 1772396109.836038
[2026-03-02 21:26:09] 2026-03-02 11:29:09,337 | INFO     | mean y: 2475400.7811975377
[2026-03-02 21:26:09] 2026-03-02 11:29:09,337 | INFO     | intersect: -2103949586.9143677
[2026-03-02 21:26:09] 2026-03-02 11:29:09,343 | INFO     | chi2: 5.384046273762741
[2026-03-02 21:26:09] 2026-03-02 11:29:09,343 | INFO     | current chi2=5.384046273762741 (change=20.827675172350954 %)
[2026-03-02 21:26:09] 2026-03-02 11:29:09,344 | INFO     | right removable region: 1786
[2026-03-02 21:26:09] 2026-03-02 11:29:09,372 | INFO     | monitor loop #3501: job 0:7034083178 is in state 'finished'
[2026-03-02 21:26:09] 2026-03-02 11:29:09,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:26:09] 2026-03-02 11:29:09,374 | INFO     | sum of square deviations: 1769461338626.2893
[2026-03-02 21:26:09] 2026-03-02 11:29:09,534 | INFO     | sum of deviations: 1310394415328.2388
[2026-03-02 21:26:09] 2026-03-02 11:29:09,534 | INFO     | mean x: 1772396414.8365977
[2026-03-02 21:26:09] 2026-03-02 11:29:09,535 | INFO     | mean y: 2478976.1309457193
[2026-03-02 21:26:09] 2026-03-02 11:29:09,535 | INFO     | intersect: -1310089042.7627356
[2026-03-02 21:26:09] 2026-03-02 11:29:09,537 | INFO     | chi2: 3.1524057537958954
[2026-03-02 21:26:09] 2026-03-02 11:29:09,537 | INFO     | current chi2=3.1524057537958954 (change=53.643917671299555 %)
[2026-03-02 21:26:09] 2026-03-02 11:29:09,539 | INFO     | sum of square deviations: 1754649137785.5952
[2026-03-02 21:26:09] 2026-03-02 11:29:10,059 | INFO     | sum of deviations: 1005508138529.9028
[2026-03-02 21:26:09] 2026-03-02 11:29:10,059 | INFO     | mean x: 1772396567.3395061
[2026-03-02 21:26:09] 2026-03-02 11:29:10,063 | INFO     | mean y: 2482113.6150392815
[2026-03-02 21:26:09] 2026-03-02 11:29:10,064 | INFO     | intersect: -1013196254.6606033
[2026-03-02 21:26:09] 2026-03-02 11:29:10,066 | INFO     | chi2: 2.056146583948969
[2026-03-02 21:26:09] 2026-03-02 11:29:10,066 | INFO     | current chi2=2.056146583948969 (change=34.77531940572344 %)
[2026-03-02 21:26:09] 2026-03-02 11:29:10,089 | INFO     | sum of square deviations: 1739919604810.5083
[2026-03-02 21:26:09] 2026-03-02 11:29:11,730 | INFO     | sum of deviations: 826578271682.3363
[2026-03-02 21:26:09] 2026-03-02 11:29:11,730 | INFO     | mean x: 1772396719.8435566
[2026-03-02 21:26:09] 2026-03-02 11:29:11,730 | INFO     | mean y: 2483965.8897017445
[2026-03-02 21:26:09] 2026-03-02 11:29:11,730 | INFO     | intersect: -839523109.2494293
[2026-03-02 21:26:09] 2026-03-02 11:29:11,733 | INFO     | chi2: 1.7233685434125599
[2026-03-02 21:26:09] 2026-03-02 11:29:11,733 | INFO     | current chi2=1.7233685434125599 (change=16.184548472088334 %)
[2026-03-02 21:26:09] 2026-03-02 11:29:11,733 | INFO     | left removable region: 30
[2026-03-02 21:26:09] 2026-03-02 11:29:11,736 | INFO     | sum of square deviations: 1678958644795.6782
[2026-03-02 21:26:09] 2026-03-02 11:29:12,124 | INFO     | monitor loop #3502: job 0:7034083178 is in state 'finished'
[2026-03-02 21:26:09] 2026-03-02 11:29:12,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:26:09] 2026-03-02 11:29:12,285 | INFO     | sum of deviations: 768059167796.1268
[2026-03-02 21:26:09] 2026-03-02 11:29:12,285 | INFO     | mean x: 1772396994.3542142
[2026-03-02 21:26:09] 2026-03-02 11:29:12,285 | INFO     | mean y: 2489220.7329157176
[2026-03-02 21:26:09] 2026-03-02 11:29:12,285 | INFO     | intersect: -808314407.2824241
[2026-03-02 21:26:09] 2026-03-02 11:29:12,291 | INFO     | chi2: 0.0312578894193461
[2026-03-02 21:26:09] 2026-03-02 11:29:12,292 | INFO     | current memory leak: 0.46 B/s (using 1756 data points, chi2=0.03)
[2026-03-02 21:26:09] 2026-03-02 11:29:12,293 | INFO     | could have reported an average CPU frequency of 2900 MHz (64 samples)
[2026-03-02 21:26:09] 2026-03-02 11:29:12,294 | INFO     | ..............................
[2026-03-02 21:26:09] 2026-03-02 11:29:12,294 | INFO     | . Timing measurements:
[2026-03-02 21:26:09] 2026-03-02 11:29:12,294 | INFO     | . get job = 0 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,294 | INFO     | . initial setup = 46 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,294 | INFO     | . payload setup = 63 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,294 | INFO     | . stage-in = 0 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,298 | INFO     | . payload execution = 109326 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,298 | INFO     | . stage-out = 24 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,298 | INFO     | . log creation = 5 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,298 | INFO     | ..............................
[2026-03-02 21:26:09] 2026-03-02 11:29:12,883 | INFO     | 
[2026-03-02 21:26:09] 2026-03-02 11:29:12,883 | INFO     | job summary report
[2026-03-02 21:26:09] 2026-03-02 11:29:12,883 | INFO     | --------------------------------------------------
[2026-03-02 21:26:09] 2026-03-02 11:29:12,883 | INFO     | PanDA job id: 7034083178
[2026-03-02 21:26:09] 2026-03-02 11:29:12,883 | INFO     | task id: 48700922
[2026-03-02 21:26:09] 2026-03-02 11:29:12,883 | INFO     | errors: (none)
[2026-03-02 21:26:09] 2026-03-02 11:29:12,884 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 21:26:09] 2026-03-02 11:29:12,884 | INFO     | pilot state: finished 
[2026-03-02 21:26:09] 2026-03-02 11:29:12,884 | INFO     | transexitcode: 0
[2026-03-02 21:26:09] 2026-03-02 11:29:12,884 | INFO     | exeerrorcode: 0
[2026-03-02 21:26:09] 2026-03-02 11:29:12,884 | INFO     | exeerrordiag: 
[2026-03-02 21:26:09] 2026-03-02 11:29:12,888 | INFO     | exitcode: 0
[2026-03-02 21:26:09] 2026-03-02 11:29:12,889 | INFO     | exitmsg: OK
[2026-03-02 21:26:09] 2026-03-02 11:29:12,889 | INFO     | cpuconsumptiontime: 57523 s
[2026-03-02 21:26:09] 2026-03-02 11:29:12,889 | INFO     | nevents: 400
[2026-03-02 21:26:09] 2026-03-02 11:29:12,889 | INFO     | neventsw: 0
[2026-03-02 21:26:09] 2026-03-02 11:29:12,889 | INFO     | pid: 542728
[2026-03-02 21:26:09] 2026-03-02 11:29:12,889 | INFO     | pgrp: 542728
[2026-03-02 21:26:09] 2026-03-02 11:29:12,890 | INFO     | corecount: 8
[2026-03-02 21:26:09] 2026-03-02 11:29:12,890 | INFO     | event service: False
[2026-03-02 21:26:09] 2026-03-02 11:29:12,890 | INFO     | sizes: {0: 2281121, 2: 2281722, 3: 2281834, 5: 2282323, 6: 2282323, 109395: 2349182, 109396: 2349309, 109423: 2358363, 109427: 2358419, 109440: 2358613}
[2026-03-02 21:26:09] 2026-03-02 11:29:12,890 | INFO     | --------------------------------------------------
[2026-03-02 21:26:09] 2026-03-02 11:29:12,890 | INFO     | 
[2026-03-02 21:26:09] 2026-03-02 11:29:12,890 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-02 21:26:09] 2026-03-02 11:29:13,192 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,193 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,193 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,193 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,195 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 21:26:09] 2026-03-02 11:29:13,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,216 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 21:26:09] 2026-03-02 11:29:13,216 | INFO     | job 7034083178 has completed (purged errors)
[2026-03-02 21:26:09] 2026-03-02 11:29:13,216 | INFO     | overall cleanup function is called
[2026-03-02 21:26:09] 2026-03-02 11:29:13,507 | INFO     | PID=519766 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 21:26:09] 2026-03-02 11:29:13,507 | INFO     | .. there are 41 such processes running
[2026-03-02 21:26:09] 2026-03-02 11:29:14,255 | INFO     | --- collectZombieJob: --- 10, [542728]
[2026-03-02 21:26:09] 2026-03-02 11:29:14,256 | INFO     | zombie collector waiting for pid 542728
[2026-03-02 21:26:09] 2026-03-02 11:29:14,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 21:26:09] 2026-03-02 11:29:14,256 | INFO     | collected zombie processes
[2026-03-02 21:26:09] 2026-03-02 11:29:14,256 | INFO     | will attempt to kill all subprocesses of pid=542728
[2026-03-02 21:26:09] 2026-03-02 11:29:26,036 | INFO     | process IDs to be killed: [542728] (in reverse order)
[2026-03-02 21:26:09] 2026-03-02 11:29:26,767 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 21:26:09] 2026-03-02 11:29:26,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 21:26:09] 2026-03-02 11:29:27,239 | INFO     | did not find any defunct processes belonging to 542728
[2026-03-02 21:26:09] 2026-03-02 11:29:27,849 | INFO     | did not find any defunct processes belonging to 542728
[2026-03-02 21:26:09] 2026-03-02 11:29:27,850 | INFO     | ready for new job
[2026-03-02 21:26:09] 2026-03-02 11:29:27,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 21:26:09] 2026-03-02 11:29:28,048 | INFO     | **************************************
[2026-03-02 21:26:09] 2026-03-02 11:29:28,137 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 21:26:09] 2026-03-02 11:29:28,138 | INFO     | **************************************
[2026-03-02 21:26:09] 2026-03-02 11:29:28,138 | INFO     | 
[2026-03-02 21:26:09] 2026-03-02 11:29:28,140 | INFO     | architecture information:
[2026-03-02 21:26:09] 2026-03-02 11:29:28,176 | INFO     | executing command: cat /etc/os-release
[2026-03-02 21:26:09] 2026-03-02 11:29:28,340 | INFO     | cat /etc/os-release:
[2026-03-02 21:26:09] NAME="CentOS Linux"
[2026-03-02 21:26:09] VERSION="7 (Core)"
[2026-03-02 21:26:09] ID="centos"
[2026-03-02 21:26:09] ID_LIKE="rhel fedora"
[2026-03-02 21:26:09] VERSION_ID="7"
[2026-03-02 21:26:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 21:26:09] ANSI_COLOR="0;31"
[2026-03-02 21:26:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 21:26:09] HOME_URL="https://www.centos.org/"
[2026-03-02 21:26:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 21:26:09] 
[2026-03-02 21:26:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 21:26:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 21:26:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 21:26:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 21:26:09] 
[2026-03-02 21:26:09] 2026-03-02 11:29:28,340 | INFO     | **************************************
[2026-03-02 21:26:09] 2026-03-02 11:29:28,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-02 21:26:09] 2026-03-02 11:29:29,006 | INFO     | sufficient remaining disk space (51459915776 B)
[2026-03-02 21:26:09] 2026-03-02 11:29:29,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 21:26:09] 2026-03-02 11:29:29,007 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 21:26:09] 2026-03-02 11:29:29,007 | INFO     | update_server=False
[2026-03-02 21:26:09] 2026-03-02 11:29:29,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 21:26:09] 2026-03-02 11:29:29,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:26:09] 2026-03-02 11:29:29,007 | INFO     | aborting loop
[2026-03-02 21:26:09] 2026-03-02 11:29:29,427 | INFO     | all data control threads have been joined
[2026-03-02 21:26:09] 2026-03-02 11:29:30,013 | INFO     | [job] retrieve thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:30,013 | INFO     | [job] job monitor thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:30,028 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:30,054 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:30,195 | INFO     | all payload control threads have been joined
[2026-03-02 21:26:09] 2026-03-02 11:29:30,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 21:26:09] 2026-03-02 11:29:30,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:26:09] 2026-03-02 11:29:30,481 | INFO     | [data] control thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:30,638 | INFO     | [payload] failed_post thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:30,711 | INFO     | all job control threads have been joined
[2026-03-02 21:26:09] 2026-03-02 11:29:30,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 21:26:09] 2026-03-02 11:29:31,193 | INFO     | [job] validate thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,202 | INFO     | [payload] control thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,208 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,216 | INFO     | [data] copytool_in thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,360 | INFO     | [payload] validate_post thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,414 | INFO     | [job] queue monitor thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:31,718 | INFO     | [job] control thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:32,362 | INFO     | [data] copytool_out thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:34,830 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 21:26:09] 2026-03-02 11:29:51,450 | INFO     | [monitor] cgroup control has ended
[2026-03-02 21:26:09] 2026-03-02 11:29:53,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577534097216)>', '<ExcThread(monitor, started 140576812947200)>']
[2026-03-02 21:26:09] 2026-03-02 11:29:54,433 | INFO     | PID=519766 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 21:26:09] 2026-03-02 11:29:54,434 | INFO     | .. there are 41 such processes running
[2026-03-02 21:26:09] 2026-03-02 11:29:54,439 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 21:26:09] 2026-03-02 11:29:54,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 21:26:09] 2026-03-02 11:29:54,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 21:26:09] 2026-03-02 11:29:54,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 21:26:09] 2026-03-02 11:29:54,440 | INFO     | [monitor] control thread has ended
[2026-03-02 21:26:09] 2026-03-02 11:29:58,440 | INFO     | all workflow threads have been joined
[2026-03-02 21:26:09] 2026-03-02 11:29:58,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 21:26:09] 2026-03-02 11:29:58,441 | INFO     | traces error code: 0
[2026-03-02 21:26:09] 2026-03-02 11:29:58,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 21:26:09] 2026-03-02 11:29:58,872 [wrapper] ==== pilot stdout END ====
[2026-03-02 21:26:09] 2026-03-02 11:29:58,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 21:26:09] 2026-03-02 11:29:58,937 [wrapper] pilotpid: 519766
[2026-03-02 21:26:09] 2026-03-02 11:29:58,958 [wrapper] Pilot exit status: 0
[2026-03-02 21:26:09] 2026-03-02 11:29:59,132 [wrapper] pandaids: 7034083178
[2026-03-02 21:26:09] 2026-03-02 11:29:59,353 [wrapper] cleanup supervisor_pilot 1991855 519768
[2026-03-02 21:26:09] 2026-03-02 11:29:59,376 [wrapper] Test setup, not cleaning
[2026-03-02 21:26:09] 2026-03-02 11:29:59,406 [wrapper] apfmon messages muted
[2026-03-02 21:26:09] 2026-03-02 11:29:59,443 [wrapper] ==== wrapper stdout END ====
[2026-03-02 21:26:09] 2026-03-02 11:29:59,475 [wrapper] ==== wrapper stderr END ====
[2026-03-02 21:26:09]  *** Error codes and diagnostics ***
[2026-03-02 21:26:09]     "exeErrorCode": 0,
[2026-03-02 21:26:09]     "exeErrorDiag": "",
[2026-03-02 21:26:09]     "pilotErrorCode": 0,
[2026-03-02 21:26:09]     "pilotErrorDiag": "",
[2026-03-02 21:26:09]  *** Listing of results directory ***
[2026-03-02 21:26:09] total 351324
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 19:35 pilot3.tar.gz
[2026-03-02 21:26:09] -rwx------. 1 boincer umatlas     36322 Feb 28 19:36 runpilot2-wrapper.sh
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 19:37 queuedata.json
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas       100 Mar  1 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 21:26:09] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  1 00:02 run_atlas
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas       105 Mar  1 00:02 job.xml
[2026-03-02 21:26:09] -rw-r--r--. 2 boincer umatlas 191740041 Mar  1 00:02 EVNT.48700920._000068.pool.root.1
[2026-03-02 21:26:09] -rw-r--r--. 2 boincer umatlas     15845 Mar  1 00:02 start_atlas.sh
[2026-03-02 21:26:09] drwxrwx--x. 2 boincer umatlas      4096 Mar  1 00:02 shared
[2026-03-02 21:26:09] -rw-r--r--. 2 boincer umatlas    597934 Mar  1 00:02 input.tar.gz
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas         0 Mar  1 00:02 boinc_lockfile
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas      2516 Mar  1 00:02 pandaJob.out
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas        57 Mar  1 00:02 setup.sh.local
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas    998782 Mar  1 00:04 agis_schedconf.cvmfs.json
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas       434 Mar  1 00:05 workernode_map.json
[2026-03-02 21:26:09] drwx------. 5 boincer umatlas      4096 Mar  1 00:05 pilot3
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas 143190657 Mar  2 06:26 HITS.48700922._001707.pool.root.1
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas       529 Mar  2 06:26 boinc_task_state.xml
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas      1039 Mar  2 06:28 memory_monitor_summary.json
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas   1513015 Mar  2 06:28 agis_ddmendpoints.agis.ALL.json
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas   1330457 Mar  2 06:28 log.48700922._001707.job.log.tgz.1
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas      6378 Mar  2 06:29 heartbeat.json
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas        95 Mar  2 06:29 pilot_heartbeat.json
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas      4819 Mar  2 06:29 pilotlog.txt
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas   9118760 Mar  2 06:29 log.48700922._001707.job.log.1
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas       357 Mar  2 06:30 output.list
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas       620 Mar  2 06:30 runtime_log
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas  10465280 Mar  2 06:30 result.tar.gz
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas      9338 Mar  2 06:30 runtime_log.err
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas       659 Mar  2 06:30 I8qMDmayjG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpi6KDmayfFlm.diag
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas      6523 Mar  2 21:22 init_data.xml
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas        27 Mar  2 21:26 wrapper_checkpoint.txt
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas      8192 Mar  2 21:26 boinc_mmap_file
[2026-03-02 21:26:09] -rw-r--r--. 1 boincer umatlas     21420 Mar  2 21:26 stderr.txt
[2026-03-02 21:26:09] HITS file was successfully produced:
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas 143190657 Mar  2 06:26 shared/HITS.pool.root.1
[2026-03-02 21:26:09]  *** Contents of shared directory: ***
[2026-03-02 21:26:09] total 337908
[2026-03-02 21:26:09] -rw-r--r--. 2 boincer umatlas 191740041 Mar  1 00:02 ATLAS.root_0
[2026-03-02 21:26:09] -rw-r--r--. 2 boincer umatlas     15845 Mar  1 00:02 start_atlas.sh
[2026-03-02 21:26:09] -rw-r--r--. 2 boincer umatlas    597934 Mar  1 00:02 input.tar.gz
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas 143190657 Mar  2 06:26 HITS.pool.root.1
[2026-03-02 21:26:09] -rw-------. 1 boincer umatlas  10465280 Mar  2 06:30 result.tar.gz
21:26:11 (508510): run_atlas exited; CPU time 62550.245226
21:26:11 (508510): called boinc_finish(0)

</stderr_txt>
]]>

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