Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:58 (3835529): wrapper (7.7.26015): starting
04:15:58 (3835529): wrapper: running run_atlas (--nthreads 2)
[2026-03-02 04:15:58] Arguments: --nthreads 2
[2026-03-02 04:15:58] Threads: 2
[2026-03-02 04:15:58] Checking for CVMFS
[2026-03-02 04:15:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 04:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 04:15:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 04:15:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 04:15:58] 2.9.2.0 3296841 6364 64220 156793 2 49 24377070 36864001 0 130560 0 1529807 99.970 246437 15802 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-02 04:15:58] CVMFS is ok
[2026-03-02 04:15:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 04:15:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 04:15:58] Further information can be found at the LHC@home message board.
[2026-03-02 04:15:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 04:15:58] Checking for apptainer binary...
[2026-03-02 04:15:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 04:15:58] Running /usr/bin/apptainer --version
[2026-03-02 04:15:59] apptainer version 1.4.1-1.1
[2026-03-02 04:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 04:15:59] thA354
[2026-03-02 04:15:59] apptainer works
[2026-03-02 04:15:59] Set ATHENA_PROC_NUMBER=2
[2026-03-02 04:15:59] Set ATHENA_CORE_NUMBER=2
[2026-03-02 04:15:59] Starting ATLAS job with PandaID=7033895671
[2026-03-02 04:15:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 08:32:51]  *** The last 200 lines of the pilot log: ***
[2026-03-02 08:32:51] 2026-03-02 07:31:51,260 | WARNING  | process 3843967 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 08:32:51] 2026-03-02 07:31:51,260 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7033895671/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,291 | INFO     | number of running child processes to parent process 3843967: 1
[2026-03-02 08:32:51] 2026-03-02 07:31:51,291 | INFO     | maximum number of monitored processes: 6
[2026-03-02 08:32:51] 2026-03-02 07:31:51,490 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,490 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7033895671/jobReport.json
[2026-03-02 08:32:51] 2026-03-02 07:31:51,492 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-03-02 08:32:51] 2026-03-02 07:31:51,492 | INFO     | this job has now completed (state=finished)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,492 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,492 | INFO     | log transfer has been attempted: DONE
[2026-03-02 08:32:51] 2026-03-02 07:31:51,492 | INFO     | job 7033895671 has finished - writing final server update
[2026-03-02 08:32:51] 2026-03-02 07:31:51,493 | INFO     | total number of processed events: 400 (read)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,493 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7033895671/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,493 | INFO     | extracted standard info from prmon json
[2026-03-02 08:32:51] 2026-03-02 07:31:51,493 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 08:32:51] 2026-03-02 07:31:51,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 08:32:51] 2026-03-02 07:31:51,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 08:32:51] 2026-03-02 07:31:51,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 08:32:51] 2026-03-02 07:31:51,495 | INFO     | fitting pss+swap vs Time
[2026-03-02 08:32:51] 2026-03-02 07:31:51,495 | INFO     | sum of square deviations: 4903347750.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,495 | INFO     | sum of deviations: -81457008250.99998
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | mean x: 1772429029.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | mean y: 2367546.557768924
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | intersect: 29446896754.0905
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | chi2: 1.9393764319917852
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | sum of square deviations: 4616114457.5
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | sum of deviations: -79111346489.5
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | mean x: 1772428876.5
[2026-03-02 08:32:51] 2026-03-02 07:31:51,496 | INFO     | mean y: 2368792.0691056913
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | intersect: 30378399600.613396
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | chi2: 1.9320140060183353
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | current chi2=1.9320140060183353 (change=0.3796285162591438 %)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | right removable region: 245
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | sum of square deviations: 4616114457.5
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | sum of deviations: -113678400434.99994
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | mean x: 1772429181.5
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | mean y: 2384454.5203252034
[2026-03-02 08:32:51] 2026-03-02 07:31:51,497 | INFO     | intersect: 43650980279.49423
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | chi2: 0.4616279655443872
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | current chi2=0.4616279655443872 (change=76.19709315172587 %)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | sum of square deviations: 4340323240.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | sum of deviations: -103174580282.00005
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | mean x: 1772429334.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | mean y: 2378644.3319502072
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | intersect: 42135105287.74086
[2026-03-02 08:32:51] 2026-03-02 07:31:51,498 | INFO     | chi2: 0.45326361406309174
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | current chi2=0.45326361406309174 (change=1.8119247761412276 %)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | left removable region: 20
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | sum of square deviations: 3531973200.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | sum of deviations: -78097082379.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | mean x: 1772429456.0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | mean y: 2366921.6044444446
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | intersect: 39193369060.63488
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | chi2: 0.4089171692036683
[2026-03-02 08:32:51] 2026-03-02 07:31:51,499 | INFO     | current memory leak: -22.11 B/s (using 225 data points, chi2=0.41)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | could have reported an average CPU frequency of 3500 MHz (12 samples)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | ..............................
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . Timing measurements:
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . get job = 0 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . initial setup = 8 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . payload setup = 8 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . stage-in = 0 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . payload execution = 15302 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . stage-out = 0 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | . log creation = 0 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,500 | INFO     | ..............................
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | 
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | job summary report
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | --------------------------------------------------
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | PanDA job id: 7033895671
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | task id: 48844526
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | errors: (none)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | pilot state: finished 
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | transexitcode: 0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | exeerrorcode: 0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | exeerrordiag: 
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | exitcode: 0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | exitmsg: OK
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | cpuconsumptiontime: 30144 s
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | nevents: 400
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | neventsw: 0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | pid: 3843967
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | pgrp: 3843967
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | corecount: 2
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | event service: False
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | sizes: {0: 2281927, 1: 2282388, 11: 2282388, 15314: 2313773, 15315: 2322777, 15318: 2322833, 15319: 2323155}
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | --------------------------------------------------
[2026-03-02 08:32:51] 2026-03-02 07:31:51,527 | INFO     | 
[2026-03-02 08:32:51] 2026-03-02 07:31:51,528 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-03-02 08:32:51] 2026-03-02 07:31:51,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,538 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,538 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,538 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | job 7033895671 has completed (purged errors)
[2026-03-02 08:32:51] 2026-03-02 07:31:51,539 | INFO     | overall cleanup function is called
[2026-03-02 08:32:51] 2026-03-02 07:31:52,545 | INFO     | --- collectZombieJob: --- 10, [3843967]
[2026-03-02 08:32:51] 2026-03-02 07:31:52,545 | INFO     | zombie collector waiting for pid 3843967
[2026-03-02 08:32:51] 2026-03-02 07:31:52,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 08:32:51] 2026-03-02 07:31:52,546 | INFO     | collected zombie processes
[2026-03-02 08:32:51] 2026-03-02 07:31:52,546 | INFO     | will attempt to kill all subprocesses of pid=3843967
[2026-03-02 08:32:51] 2026-03-02 07:31:52,620 | INFO     | process IDs to be killed: [3843967] (in reverse order)
[2026-03-02 08:32:51] 2026-03-02 07:31:52,642 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 08:32:51] 2026-03-02 07:31:52,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 08:32:51] 2026-03-02 07:31:52,643 | INFO     | did not find any defunct processes belonging to 3843967
[2026-03-02 08:32:51] 2026-03-02 07:31:52,643 | INFO     | did not find any defunct processes belonging to 3843967
[2026-03-02 08:32:51] 2026-03-02 07:31:52,643 | INFO     | ready for new job
[2026-03-02 08:32:51] 2026-03-02 07:31:52,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 08:32:51] 2026-03-02 07:31:52,644 | INFO     | **************************************
[2026-03-02 08:32:51] 2026-03-02 07:31:52,644 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 08:32:51] 2026-03-02 07:31:52,644 | INFO     | **************************************
[2026-03-02 08:32:51] 2026-03-02 07:31:52,644 | INFO     | 
[2026-03-02 08:32:51] 2026-03-02 07:31:52,644 | INFO     | architecture information:
[2026-03-02 08:32:51] 2026-03-02 07:31:52,644 | INFO     | executing command: cat /etc/os-release
[2026-03-02 08:32:51] 2026-03-02 07:31:52,653 | INFO     | cat /etc/os-release:
[2026-03-02 08:32:51] NAME="CentOS Linux"
[2026-03-02 08:32:51] VERSION="7 (Core)"
[2026-03-02 08:32:51] ID="centos"
[2026-03-02 08:32:51] ID_LIKE="rhel fedora"
[2026-03-02 08:32:51] VERSION_ID="7"
[2026-03-02 08:32:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 08:32:51] ANSI_COLOR="0;31"
[2026-03-02 08:32:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 08:32:51] HOME_URL="https://www.centos.org/"
[2026-03-02 08:32:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 08:32:51] 
[2026-03-02 08:32:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 08:32:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 08:32:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 08:32:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 08:32:51] 
[2026-03-02 08:32:51] 2026-03-02 07:31:52,653 | INFO     | **************************************
[2026-03-02 08:32:51] 2026-03-02 07:31:53,157 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | INFO     | sufficient remaining disk space (498601033728 B)
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | INFO     | update_server=False
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | INFO     | aborting loop
[2026-03-02 08:32:51] 2026-03-02 07:31:53,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 08:32:51] 2026-03-02 07:31:53,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 08:32:51] 2026-03-02 07:31:54,174 | INFO     | [job] job monitor thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:54,175 | INFO     | [job] retrieve thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:54,176 | INFO     | [job] queue monitor thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:54,199 | INFO     | [data] copytool_in thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:54,205 | INFO     | all data control threads have been joined
[2026-03-02 08:32:51] 2026-03-02 07:31:54,332 | INFO     | all payload control threads have been joined
[2026-03-02 08:32:51] 2026-03-02 07:31:54,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:54,580 | INFO     | [payload] validate_post thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:54,620 | INFO     | all job control threads have been joined
[2026-03-02 08:32:51] 2026-03-02 07:31:55,079 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,211 | INFO     | [data] control thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,287 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,290 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,334 | INFO     | [payload] control thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,488 | INFO     | [data] copytool_out thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,550 | INFO     | [job] validate thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,601 | INFO     | [payload] failed_post thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:55,623 | INFO     | [job] control thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:31:56,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 08:32:51] 2026-03-02 07:32:00,571 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 08:32:51] 2026-03-02 07:32:23,151 | INFO     | PID=3839558 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 08:32:51] 2026-03-02 07:32:23,151 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 08:32:51] 2026-03-02 07:32:23,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 08:32:51] 2026-03-02 07:32:23,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 08:32:51] 2026-03-02 07:32:45,974 | INFO     | [monitor] cgroup control has ended
[2026-03-02 08:32:51] 2026-03-02 07:32:46,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663934961472)>', '<ExcThread(monitor, started 139662924437248)>']
[2026-03-02 08:32:51] 2026-03-02 07:32:47,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 08:32:51] 2026-03-02 07:32:47,258 | INFO     | [monitor] control thread has ended
[2026-03-02 08:32:51] 2026-03-02 07:32:51,800 | INFO     | all workflow threads have been joined
[2026-03-02 08:32:51] 2026-03-02 07:32:51,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 08:32:51] 2026-03-02 07:32:51,800 | INFO     | traces error code: 0
[2026-03-02 08:32:51] 2026-03-02 07:32:51,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 08:32:51] 2026-03-02 07:32:51,844 [wrapper] ==== pilot stdout END ====
[2026-03-02 08:32:51] 2026-03-02 07:32:51,847 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 08:32:51] 2026-03-02 07:32:51,850 [wrapper] pilotpid: 3839558
[2026-03-02 08:32:51] 2026-03-02 07:32:51,852 [wrapper] Pilot exit status: 0
[2026-03-02 08:32:51] 2026-03-02 07:32:51,857 [wrapper] pandaids: 7033895671
[2026-03-02 08:32:51] 2026-03-02 07:32:51,870 [wrapper] cleanup supervisor_pilot 3851237 3839559
[2026-03-02 08:32:51] 2026-03-02 07:32:51,872 [wrapper] Test setup, not cleaning
[2026-03-02 08:32:51] 2026-03-02 07:32:51,874 [wrapper] apfmon messages muted
[2026-03-02 08:32:51] 2026-03-02 07:32:51,876 [wrapper] ==== wrapper stdout END ====
[2026-03-02 08:32:51] 2026-03-02 07:32:51,878 [wrapper] ==== wrapper stderr END ====
[2026-03-02 08:32:51]  *** Error codes and diagnostics ***
[2026-03-02 08:32:51]     "exeErrorCode": 0,
[2026-03-02 08:32:51]     "exeErrorDiag": "",
[2026-03-02 08:32:51]     "pilotErrorCode": 0,
[2026-03-02 08:32:51]     "pilotErrorDiag": "",
[2026-03-02 08:32:51]  *** Listing of results directory ***
[2026-03-02 08:32:51] total 407144
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc    584627 Feb 28 23:55 pilot3.tar.gz
[2026-03-02 08:32:51] -rwx------ 1 boinc boinc     36322 Feb 28 23:58 runpilot2-wrapper.sh
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc      5111 Mar  1 00:01 queuedata.json
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc       100 Mar  2 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 08:32:51] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 04:15 run_atlas
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc       105 Mar  2 04:15 job.xml
[2026-03-02 08:32:51] -rw-r--r-- 2 boinc boinc 213462215 Mar  2 04:15 EVNT.48453503._000002.pool.root.1
[2026-03-02 08:32:51] -rw-r--r-- 2 boinc boinc    597978 Mar  2 04:15 input.tar.gz
[2026-03-02 08:32:51] -rw-r--r-- 2 boinc boinc     15845 Mar  2 04:15 start_atlas.sh
[2026-03-02 08:32:51] drwxrwx--x 2 boinc boinc      4096 Mar  2 04:15 shared
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc         0 Mar  2 04:15 boinc_setup_complete
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc      6205 Mar  2 04:15 init_data.xml
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc         0 Mar  2 04:15 boinc_lockfile
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc      2626 Mar  2 04:15 pandaJob.out
[2026-03-02 08:32:51] -rw------- 1 boinc boinc    998242 Mar  2 04:16 agis_schedconf.cvmfs.json
[2026-03-02 08:32:51] -rw------- 1 boinc boinc       425 Mar  2 04:16 workernode_map.json
[2026-03-02 08:32:51] drwx------ 5 boinc boinc      4096 Mar  2 04:16 pilot3
[2026-03-02 08:32:51] -rw------- 1 boinc boinc 194464519 Mar  2 08:31 HITS.48844526._000028.pool.root.1
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc       531 Mar  2 08:31 boinc_task_state.xml
[2026-03-02 08:32:51] -rw------- 1 boinc boinc      1017 Mar  2 08:31 memory_monitor_summary.json
[2026-03-02 08:32:51] -rw------- 1 boinc boinc   1513015 Mar  2 08:31 agis_ddmendpoints.agis.ALL.json
[2026-03-02 08:32:51] -rw------- 1 boinc boinc    371361 Mar  2 08:31 log.48844526._000028.job.log.tgz.1
[2026-03-02 08:32:51] -rw------- 1 boinc boinc      6295 Mar  2 08:31 heartbeat.json
[2026-03-02 08:32:51] -rw------- 1 boinc boinc        95 Mar  2 08:32 pilot_heartbeat.json
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc      8192 Mar  2 08:32 boinc_mmap_file
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc        28 Mar  2 08:32 wrapper_checkpoint.txt
[2026-03-02 08:32:51] -rw------- 1 boinc boinc      4748 Mar  2 08:32 pilotlog.txt
[2026-03-02 08:32:51] -rw------- 1 boinc boinc   2155995 Mar  2 08:32 log.48844526._000028.job.log.1
[2026-03-02 08:32:51] -rw------- 1 boinc boinc       357 Mar  2 08:32 output.list
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc       620 Mar  2 08:32 runtime_log
[2026-03-02 08:32:51] -rw------- 1 boinc boinc   2549760 Mar  2 08:32 result.tar.gz
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc      8897 Mar  2 08:32 runtime_log.err
[2026-03-02 08:32:51] -rw------- 1 boinc boinc       661 Mar  2 08:32 RI7KDmlRiG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvL8KDmGISICn.diag
[2026-03-02 08:32:51] -rw-r--r-- 1 boinc boinc     21338 Mar  2 08:32 stderr.txt
[2026-03-02 08:32:51] HITS file was successfully produced:
[2026-03-02 08:32:51] -rw------- 1 boinc boinc 194464519 Mar  2 08:31 shared/HITS.pool.root.1
[2026-03-02 08:32:51]  *** Contents of shared directory: ***
[2026-03-02 08:32:51] total 401468
[2026-03-02 08:32:51] -rw-r--r-- 2 boinc boinc 213462215 Mar  2 04:15 ATLAS.root_0
[2026-03-02 08:32:51] -rw-r--r-- 2 boinc boinc    597978 Mar  2 04:15 input.tar.gz
[2026-03-02 08:32:51] -rw-r--r-- 2 boinc boinc     15845 Mar  2 04:15 start_atlas.sh
[2026-03-02 08:32:51] -rw------- 1 boinc boinc 194464519 Mar  2 08:31 HITS.pool.root.1
[2026-03-02 08:32:51] -rw------- 1 boinc boinc   2549760 Mar  2 08:32 result.tar.gz
08:33:14 (3835529): run_atlas exited; CPU time 30223.144302
08:33:14 (3835529): called boinc_finish(0)

</stderr_txt>
]]>

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