Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:18 (1160962): wrapper (7.7.26015): starting
09:44:18 (1160962): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 09:44:18] Arguments: --nthreads 4
[2026-03-01 09:44:18] Threads: 4
[2026-03-01 09:44:18] Checking for CVMFS
[2026-03-01 09:44:18] No cvmfs_config command found, will try listing directly
[2026-03-01 09:44:18] CVMFS is ok
[2026-03-01 09:44:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 09:44:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 09:44:18] Further information can be found at the LHC@home message board.
[2026-03-01 09:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 09:44:18] Checking for apptainer binary...
[2026-03-01 09:44:18] which: no apptainer in ((null))
[2026-03-01 09:44:18] apptainer is not installed, using version from CVMFS
[2026-03-01 09:44:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 09:44:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-01 09:44:18] apptainer works
[2026-03-01 09:44:18] Set ATHENA_PROC_NUMBER=4
[2026-03-01 09:44:18] Set ATHENA_CORE_NUMBER=4
[2026-03-01 09:44:18] Starting ATLAS job with PandaID=7033895763
[2026-03-01 09:44:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 10:50:47]  *** The last 200 lines of the pilot log: ***
[2026-03-01 10:50:47]  mtime=0
[2026-03-01 10:50:47]  protocol_id=None
[2026-03-01 10:50:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 10:50:47]  replicas=None
[2026-03-01 10:50:47]  scope=mc23_13p6TeV
[2026-03-01 10:50:47]  status=None
[2026-03-01 10:50:47]  status_code=0
[2026-03-01 10:50:47]  storage_token=
[2026-03-01 10:50:47]  surl=/var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7033895763/log.48700906._000532.job.log.tgz.1
[2026-03-01 10:50:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/c4/log.48700906._000532.job.log.tgz.1
[2026-03-01 10:50:47]  workdir=None
[2026-03-01 10:50:47] ]
[2026-03-01 10:50:47] 2026-03-01 09:50:11,114 | INFO     | time since job start (3940s) is within the limit (349056.0s)
[2026-03-01 10:50:47] 2026-03-01 09:50:11,120 | INFO     | transferring file log.48700906._000532.job.log.tgz.1 from /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7033895763/log.48700906._000532.job.log.tgz.1 to /var/lib/
[2026-03-01 10:50:47] 2026-03-01 09:50:11,121 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7033895763/log.48700906._000532.job.log.tgz.1 /var/lib/boinc/var/slot180/slots/0/
[2026-03-01 10:50:47] 2026-03-01 09:50:11,142 | INFO     | adding to output.list: log.48700906._000532.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/c4/log.48700906._000532.job.log.tg
[2026-03-01 10:50:47] 2026-03-01 09:50:11,142 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 10:50:47] 2026-03-01 09:50:11,142 | INFO     | summary of transferred files:
[2026-03-01 10:50:47] 2026-03-01 09:50:11,143 | INFO     |  -- lfn=log.48700906._000532.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 10:50:47] 2026-03-01 09:50:11,143 | INFO     | stage-out finished correctly
[2026-03-01 10:50:47] 2026-03-01 09:50:12,528 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 10:50:47] 2026-03-01 09:50:12,755 | INFO     | PID=1169098 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 10:50:47] 2026-03-01 09:50:12,755 | INFO     | .. there are 50 such processes running
[2026-03-01 10:50:47] 2026-03-01 09:50:13,756 | INFO     | time since job start (3942s) is within the limit (349056.0s)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,284 | INFO     | job 7033895763 has state=finished
[2026-03-01 10:50:47] 2026-03-01 09:50:14,284 | INFO     | preparing for final server update for job 7033895763 in state='finished'
[2026-03-01 10:50:47] 2026-03-01 09:50:14,284 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7033895763/jobReport.json
[2026-03-01 10:50:47] 2026-03-01 09:50:14,285 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/0/workernode_map.json
[2026-03-01 10:50:47] 2026-03-01 09:50:14,286 | INFO     | this job has now completed (state=finished)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,286 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,286 | INFO     | log transfer has been attempted: DONE
[2026-03-01 10:50:47] 2026-03-01 09:50:14,286 | INFO     | job 7033895763 has finished - writing final server update
[2026-03-01 10:50:47] 2026-03-01 09:50:14,286 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16403/.job.ad'
[2026-03-01 10:50:47] 2026-03-01 09:50:14,286 | INFO     | total number of processed events: 400 (read)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,304 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7033895763/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,305 | INFO     | extracted standard info from prmon json
[2026-03-01 10:50:47] 2026-03-01 09:50:14,305 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 10:50:47] 2026-03-01 09:50:14,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 10:50:47] 2026-03-01 09:50:14,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 10:50:47] 2026-03-01 09:50:14,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 10:50:47] 2026-03-01 09:50:14,306 | INFO     | fitting pss+swap vs Time
[2026-03-01 10:50:47] 2026-03-01 09:50:14,306 | INFO     | sum of square deviations: 60482994.5
[2026-03-01 10:50:47] 2026-03-01 09:50:14,306 | INFO     | sum of deviations: 33618533.5
[2026-03-01 10:50:47] 2026-03-01 09:50:14,306 | INFO     | mean x: 1772356734.5
[2026-03-01 10:50:47] 2026-03-01 09:50:14,306 | INFO     | mean y: 2321001.8103448274
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | intersect: -982815973.3891693
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | chi2: 0.00027722815188655034
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | current memory leak: 0.56 B/s (using 58 data points, chi2=0.00)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | could have reported an average CPU frequency of 3590 MHz (6 samples)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | ..............................
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . Timing measurements:
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . get job = 0 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . initial setup = 5 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . payload setup = 4 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . stage-in = 0 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . payload execution = 3920 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . stage-out = 0 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | . log creation = 0 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,307 | INFO     | ..............................
[2026-03-01 10:50:47] 2026-03-01 09:50:14,356 | INFO     | 
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | job summary report
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | --------------------------------------------------
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | PanDA job id: 7033895763
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | task id: 48700906
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | errors: (none)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | pilot state: finished 
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | transexitcode: 0
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | exeerrorcode: 0
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | exeerrordiag: 
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | exitcode: 0
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | exitmsg: OK
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | cpuconsumptiontime: 14978 s
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | nevents: 400
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | neventsw: 0
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | pid: 1183288
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | pgrp: 1183288
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | corecount: 4
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | event service: False
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | sizes: {0: 2282221, 11: 2282221, 3928: 2308135, 3929: 2317157, 3930: 2317213, 3932: 2317407}
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | --------------------------------------------------
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | 
[2026-03-01 10:50:47] 2026-03-01 09:50:14,357 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/0
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | job 7033895763 has completed (purged errors)
[2026-03-01 10:50:47] 2026-03-01 09:50:14,374 | INFO     | overall cleanup function is called
[2026-03-01 10:50:47] 2026-03-01 09:50:15,380 | INFO     | --- collectZombieJob: --- 10, [1183288]
[2026-03-01 10:50:47] 2026-03-01 09:50:15,381 | INFO     | zombie collector waiting for pid 1183288
[2026-03-01 10:50:47] 2026-03-01 09:50:15,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 10:50:47] 2026-03-01 09:50:15,381 | INFO     | collected zombie processes
[2026-03-01 10:50:47] 2026-03-01 09:50:15,381 | INFO     | will attempt to kill all subprocesses of pid=1183288
[2026-03-01 10:50:47] 2026-03-01 09:50:15,853 | INFO     | process IDs to be killed: [1183288] (in reverse order)
[2026-03-01 10:50:47] 2026-03-01 09:50:16,084 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 10:50:47] 2026-03-01 09:50:16,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 10:50:47] 2026-03-01 09:50:16,113 | INFO     | did not find any defunct processes belonging to 1183288
[2026-03-01 10:50:47] 2026-03-01 09:50:16,138 | INFO     | did not find any defunct processes belonging to 1183288
[2026-03-01 10:50:47] 2026-03-01 09:50:16,139 | INFO     | ready for new job
[2026-03-01 10:50:47] 2026-03-01 09:50:16,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 10:50:47] 2026-03-01 09:50:16,140 | INFO     | **************************************
[2026-03-01 10:50:47] 2026-03-01 09:50:16,140 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 10:50:47] 2026-03-01 09:50:16,140 | INFO     | **************************************
[2026-03-01 10:50:47] 2026-03-01 09:50:16,140 | INFO     | 
[2026-03-01 10:50:47] 2026-03-01 09:50:16,144 | INFO     | architecture information:
[2026-03-01 10:50:47] 2026-03-01 09:50:16,145 | INFO     | executing command: cat /etc/os-release
[2026-03-01 10:50:47] 2026-03-01 09:50:16,153 | INFO     | cat /etc/os-release:
[2026-03-01 10:50:47] NAME="CentOS Linux"
[2026-03-01 10:50:47] VERSION="7 (Core)"
[2026-03-01 10:50:47] ID="centos"
[2026-03-01 10:50:47] ID_LIKE="rhel fedora"
[2026-03-01 10:50:47] VERSION_ID="7"
[2026-03-01 10:50:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 10:50:47] ANSI_COLOR="0;31"
[2026-03-01 10:50:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 10:50:47] HOME_URL="https://www.centos.org/"
[2026-03-01 10:50:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 10:50:47] 
[2026-03-01 10:50:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 10:50:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 10:50:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 10:50:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 10:50:47] 
[2026-03-01 10:50:47] 2026-03-01 09:50:16,154 | INFO     | **************************************
[2026-03-01 10:50:47] 2026-03-01 09:50:16,657 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-01 10:50:47] 2026-03-01 09:50:16,672 | INFO     | sufficient remaining disk space (239462252544 B)
[2026-03-01 10:50:47] 2026-03-01 09:50:16,672 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 10:50:47] 2026-03-01 09:50:16,673 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 10:50:47] 2026-03-01 09:50:16,673 | INFO     | update_server=False
[2026-03-01 10:50:47] 2026-03-01 09:50:16,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 10:50:47] 2026-03-01 09:50:16,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 10:50:47] 2026-03-01 09:50:16,951 | INFO     | job.realtimelogging is not enabled
[2026-03-01 10:50:47] 2026-03-01 09:50:17,001 | INFO     | all data control threads have been joined
[2026-03-01 10:50:47] 2026-03-01 09:50:17,160 | WARNING  | process 1183288 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 10:50:47] 2026-03-01 09:50:17,490 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 10:50:47] 2026-03-01 09:50:17,518 | INFO     | all job control threads have been joined
[2026-03-01 10:50:47] 2026-03-01 09:50:17,678 | INFO     | [job] retrieve thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:17,815 | INFO     | all payload control threads have been joined
[2026-03-01 10:50:47] 2026-03-01 09:50:17,838 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:17,956 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:17,963 | INFO     | number of running child processes to parent process 1183288: 1
[2026-03-01 10:50:47] 2026-03-01 09:50:17,964 | INFO     | maximum number of monitored processes: 6
[2026-03-01 10:50:47] 2026-03-01 09:50:17,964 | INFO     | aborting job monitoring since job object (job id=7033895763) has expired
[2026-03-01 10:50:47] 2026-03-01 09:50:17,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:50:47] 2026-03-01 09:50:17,964 | INFO     | will abort loop
[2026-03-01 10:50:47] 2026-03-01 09:50:17,982 | INFO     | [payload] failed_post thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:17,989 | INFO     | [data] copytool_in thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,006 | INFO     | [data] control thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,040 | INFO     | [payload] validate_post thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,524 | INFO     | [job] control thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 10:50:47] 2026-03-01 09:50:18,705 | INFO     | [data] copytool_out thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,820 | INFO     | [payload] control thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,890 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,929 | INFO     | [job] validate thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:18,969 | INFO     | [job] job monitor thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:19,090 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:19,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:50:47] 2026-03-01 09:50:20,368 | INFO     | [job] queue monitor thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:22,587 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 10:50:47] 2026-03-01 09:50:37,060 | INFO     | [monitor] cgroup control has ended
[2026-03-01 10:50:47] 2026-03-01 09:50:37,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22785047791424)>', '<ExcThread(monitor, started 22784734394112)>']
[2026-03-01 10:50:47] 2026-03-01 09:50:42,763 | INFO     | all workflow threads have been joined
[2026-03-01 10:50:47] 2026-03-01 09:50:42,764 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 10:50:47] 2026-03-01 09:50:42,764 | INFO     | traces error code: 0
[2026-03-01 10:50:47] 2026-03-01 09:50:42,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 10:50:47] 2026-03-01 09:50:47,387 | INFO     | PID=1169098 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 10:50:47] 2026-03-01 09:50:47,388 | INFO     | .. there are 50 such processes running
[2026-03-01 10:50:47] 2026-03-01 09:50:47,388 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 10:50:47] 2026-03-01 09:50:47,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 10:50:47] 2026-03-01 09:50:47,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 10:50:47] 2026-03-01 09:50:47,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 10:50:47] 2026-03-01 09:50:47,388 | INFO     | [monitor] control thread has ended
[2026-03-01 10:50:47] 2026-03-01 09:50:47,562 [wrapper] ==== pilot stdout END ====
[2026-03-01 10:50:47] 2026-03-01 09:50:47,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 10:50:47] 2026-03-01 09:50:47,567 [wrapper] pilotpid: 1169098
[2026-03-01 10:50:47] 2026-03-01 09:50:47,570 [wrapper] Pilot exit status: 0
[2026-03-01 10:50:47] 2026-03-01 09:50:47,578 [wrapper] pandaids: 7033895763
[2026-03-01 10:50:47] 2026-03-01 09:50:47,711 [wrapper] cleanup supervisor_pilot 1675703 1169099
[2026-03-01 10:50:47] 2026-03-01 09:50:47,715 [wrapper] Test setup, not cleaning
[2026-03-01 10:50:47] 2026-03-01 09:50:47,718 [wrapper] apfmon messages muted
[2026-03-01 10:50:47] 2026-03-01 09:50:47,721 [wrapper] ==== wrapper stdout END ====
[2026-03-01 10:50:47] 2026-03-01 09:50:47,724 [wrapper] ==== wrapper stderr END ====
[2026-03-01 10:50:47]  *** Error codes and diagnostics ***
[2026-03-01 10:50:47]     "exeErrorCode": 0,
[2026-03-01 10:50:47]     "exeErrorDiag": "",
[2026-03-01 10:50:47]     "pilotErrorCode": 0,
[2026-03-01 10:50:47]     "pilotErrorDiag": "",
[2026-03-01 10:50:47]  *** Listing of results directory ***
[2026-03-01 10:50:47] total 334060
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc    584627 Feb 28 23:55 pilot3.tar.gz
[2026-03-01 10:50:47] -rwx------. 1 boinc boinc     36322 Feb 28 23:58 runpilot2-wrapper.sh
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc      5111 Mar  1 00:00 queuedata.json
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc       100 Mar  1 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 10:50:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 09:44 run_atlas
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc       105 Mar  1 09:44 job.xml
[2026-03-01 10:50:47] -rw-r--r--. 2 boinc boinc     15845 Mar  1 09:44 start_atlas.sh
[2026-03-01 10:50:47] drwxrwx--x. 2 boinc boinc      4096 Mar  1 09:44 shared
[2026-03-01 10:50:47] -rw-r--r--. 2 boinc boinc    597937 Mar  1 09:44 input.tar.gz
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc      6703 Mar  1 09:44 init_data.xml
[2026-03-01 10:50:47] -rw-r--r--. 2 boinc boinc 190845384 Mar  1 09:44 EVNT.48700904._000022.pool.root.1
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc         0 Mar  1 09:44 boinc_lockfile
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc      2518 Mar  1 09:44 pandaJob.out
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc    998782 Mar  1 09:44 agis_schedconf.cvmfs.json
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc   1513015 Mar  1 09:44 agis_ddmendpoints.agis.ALL.json
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc       443 Mar  1 09:44 workernode_map.json
[2026-03-01 10:50:47] drwx------. 5 boinc boinc      4096 Mar  1 09:44 pilot3
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc 145634713 Mar  1 10:49 HITS.48700906._000532.pool.root.1
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc       529 Mar  1 10:49 boinc_task_state.xml
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc      1029 Mar  1 10:50 memory_monitor_summary.json
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc    247719 Mar  1 10:50 log.48700906._000532.job.log.tgz.1
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc      6342 Mar  1 10:50 heartbeat.json
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc        27 Mar  1 10:50 wrapper_checkpoint.txt
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc      8192 Mar  1 10:50 boinc_mmap_file
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc        95 Mar  1 10:50 pilot_heartbeat.json
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc       823 Mar  1 10:50 pilotlog.txt
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc    587267 Mar  1 10:50 log.48700906._000532.job.log.1
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc       357 Mar  1 10:50 output.list
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc       620 Mar  1 10:50 runtime_log
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc    849920 Mar  1 10:50 result.tar.gz
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc      9221 Mar  1 10:50 runtime_log.err
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc       661 Mar  1 10:50 Q2LMDmURiG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrI8KDmnqA17m.diag
[2026-03-01 10:50:47] -rw-r--r--. 1 boinc boinc     21658 Mar  1 10:50 stderr.txt
[2026-03-01 10:50:47] HITS file was successfully produced:
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc 145634713 Mar  1 10:49 shared/HITS.pool.root.1
[2026-03-01 10:50:47]  *** Contents of shared directory: ***
[2026-03-01 10:50:47] total 330040
[2026-03-01 10:50:47] -rw-r--r--. 2 boinc boinc     15845 Mar  1 09:44 start_atlas.sh
[2026-03-01 10:50:47] -rw-r--r--. 2 boinc boinc    597937 Mar  1 09:44 input.tar.gz
[2026-03-01 10:50:47] -rw-r--r--. 2 boinc boinc 190845384 Mar  1 09:44 ATLAS.root_0
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc 145634713 Mar  1 10:49 HITS.pool.root.1
[2026-03-01 10:50:47] -rw-------. 1 boinc boinc    849920 Mar  1 10:50 result.tar.gz
10:50:49 (1160962): run_atlas exited; CPU time 15142.278105
10:50:49 (1160962): called boinc_finish(0)

</stderr_txt>
]]>

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