Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:43:24 (2215131): wrapper (7.7.26015): starting
02:43:24 (2215131): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 02:43:24] Arguments: --nthreads 4
[2026-03-03 02:43:24] Threads: 4
[2026-03-03 02:43:24] Checking for CVMFS
[2026-03-03 02:43:24] No cvmfs_config command found, will try listing directly
[2026-03-03 02:43:24] CVMFS is ok
[2026-03-03 02:43:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 02:43:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 02:43:24] Further information can be found at the LHC@home message board.
[2026-03-03 02:43:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 02:43:24] Checking for apptainer binary...
[2026-03-03 02:43:24] which: no apptainer in ((null))
[2026-03-03 02:43:24] apptainer is not installed, using version from CVMFS
[2026-03-03 02:43:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 02:43:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-03 02:43:25] apptainer works
[2026-03-03 02:43:25] Set ATHENA_PROC_NUMBER=4
[2026-03-03 02:43:25] Set ATHENA_CORE_NUMBER=4
[2026-03-03 02:43:25] Starting ATLAS job with PandaID=7033906806
[2026-03-03 02:43:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 06:05:07]  *** The last 200 lines of the pilot log: ***
[2026-03-03 06:05:07] 2026-03-03 04:52:06,145 | INFO     | job 7033906806 has state=finished
[2026-03-03 06:05:07] 2026-03-03 04:52:06,145 | INFO     | preparing for final server update for job 7033906806 in state='finished'
[2026-03-03 06:05:07] 2026-03-03 04:52:06,145 | INFO     | reading metadata from: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-7033906806/jobReport.json
[2026-03-03 06:05:07] 2026-03-03 04:52:06,148 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot84/slots/0/workernode_map.json
[2026-03-03 06:05:07] 2026-03-03 04:52:06,148 | INFO     | this job has now completed (state=finished)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,148 | INFO     | log transfer has been attempted: DONE
[2026-03-03 06:05:07] 2026-03-03 04:52:06,148 | INFO     | job 7033906806 has finished - writing final server update
[2026-03-03 06:05:07] 2026-03-03 04:52:06,149 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1731868/.job.ad'
[2026-03-03 06:05:07] 2026-03-03 04:52:06,149 | INFO     | total number of processed events: 400 (read)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,171 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-7033906806/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,172 | INFO     | extracted standard info from prmon json
[2026-03-03 06:05:07] 2026-03-03 04:52:06,172 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 06:05:07] 2026-03-03 04:52:06,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 06:05:07] 2026-03-03 04:52:06,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 06:05:07] 2026-03-03 04:52:06,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 06:05:07] 2026-03-03 04:52:06,176 | INFO     | fitting pss+swap vs Time
[2026-03-03 06:05:07] 2026-03-03 04:52:06,176 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,177 | INFO     | sum of deviations: 21783989745.999996
[2026-03-03 06:05:07] 2026-03-03 04:52:06,177 | INFO     | mean x: 1772507871.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,177 | INFO     | mean y: 2330591.2216216214
[2026-03-03 06:05:07] 2026-03-03 04:52:06,178 | INFO     | intersect: -19664966430.601284
[2026-03-03 06:05:07] 2026-03-03 04:52:06,178 | INFO     | chi2: 1.3364682587735786
[2026-03-03 06:05:07] 2026-03-03 04:52:06,178 | INFO     | sum of square deviations: 1808350185.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,179 | INFO     | sum of deviations: 21132060145.5
[2026-03-03 06:05:07] 2026-03-03 04:52:06,179 | INFO     | mean x: 1772507718.5
[2026-03-03 06:05:07] 2026-03-03 04:52:06,179 | INFO     | mean y: 2329949.4166666665
[2026-03-03 06:05:07] 2026-03-03 04:52:06,179 | INFO     | intersect: -20710881477.44255
[2026-03-03 06:05:07] 2026-03-03 04:52:06,180 | INFO     | chi2: 1.3373751806173255
[2026-03-03 06:05:07] 2026-03-03 04:52:06,180 | INFO     | current chi2=1.3373751806173255 (change=-0.0678595872212641 %)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,180 | INFO     | right removable region: 179
[2026-03-03 06:05:07] 2026-03-03 04:52:06,180 | INFO     | sum of square deviations: 1808350185.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,181 | INFO     | sum of deviations: -1909320739.9999998
[2026-03-03 06:05:07] 2026-03-03 04:52:06,181 | INFO     | mean x: 1772508023.5
[2026-03-03 06:05:07] 2026-03-03 04:52:06,181 | INFO     | mean y: 2353584.6333333333
[2026-03-03 06:05:07] 2026-03-03 04:52:06,182 | INFO     | intersect: 1873830889.8351226
[2026-03-03 06:05:07] 2026-03-03 04:52:06,182 | INFO     | chi2: 0.004780909443125996
[2026-03-03 06:05:07] 2026-03-03 04:52:06,182 | INFO     | current chi2=0.004780909443125996 (change=99.64227287765792 %)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,182 | INFO     | sum of square deviations: 1661798600.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,183 | INFO     | sum of deviations: -1920993760.9999993
[2026-03-03 06:05:07] 2026-03-03 04:52:06,183 | INFO     | mean x: 1772508176.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,183 | INFO     | mean y: 2353592.8685714286
[2026-03-03 06:05:07] 2026-03-03 04:52:06,183 | INFO     | intersect: 2051324597.7890766
[2026-03-03 06:05:07] 2026-03-03 04:52:06,184 | INFO     | chi2: 0.0046631448050019845
[2026-03-03 06:05:07] 2026-03-03 04:52:06,184 | INFO     | current chi2=0.0046631448050019845 (change=2.4632267045621132 %)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,184 | INFO     | left removable region: 20
[2026-03-03 06:05:07] 2026-03-03 04:52:06,184 | INFO     | sum of square deviations: 1246386160.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,185 | INFO     | sum of deviations: -517556207.99999994
[2026-03-03 06:05:07] 2026-03-03 04:52:06,185 | INFO     | mean x: 1772508298.0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,185 | INFO     | mean y: 2351863.283018868
[2026-03-03 06:05:07] 2026-03-03 04:52:06,185 | INFO     | intersect: 738377906.2562606
[2026-03-03 06:05:07] 2026-03-03 04:52:06,185 | INFO     | chi2: 0.0035396525480239607
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | current memory leak: -0.42 B/s (using 159 data points, chi2=0.00)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | could have reported an average CPU frequency of 2686 MHz (10 samples)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | ..............................
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . Timing measurements:
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . get job = 0 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . initial setup = 8 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . payload setup = 9 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . stage-in = 0 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . payload execution = 11267 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,186 | INFO     | . stage-out = 1 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,187 | INFO     | . log creation = 0 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,187 | INFO     | ..............................
[2026-03-03 06:05:07] 2026-03-03 04:52:06,272 | INFO     | 
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | job summary report
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | --------------------------------------------------
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | PanDA job id: 7033906806
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | task id: 48838536
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | errors: (none)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | pilot state: finished 
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | transexitcode: 0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | exeerrorcode: 0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,273 | INFO     | exeerrordiag: 
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | exitcode: 0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | exitmsg: OK
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | cpuconsumptiontime: 43254 s
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | nevents: 400
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | neventsw: 0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | pid: 2242298
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | pgrp: 2242298
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | corecount: 4
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | event service: False
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | sizes: {0: 2282297, 11: 2282297, 11280: 2312160, 11282: 2321236, 11285: 2321374}
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | --------------------------------------------------
[2026-03-03 06:05:07] 2026-03-03 04:52:06,274 | INFO     | 
[2026-03-03 06:05:07] 2026-03-03 04:52:06,275 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2026-03-03 06:05:07] 2026-03-03 04:52:06,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 06:05:07] 2026-03-03 04:52:06,314 | INFO     | job 7033906806 has completed (purged errors)
[2026-03-03 06:05:07] 2026-03-03 04:52:06,315 | INFO     | overall cleanup function is called
[2026-03-03 06:05:07] 2026-03-03 04:52:07,323 | INFO     | --- collectZombieJob: --- 10, [2242298]
[2026-03-03 06:05:07] 2026-03-03 04:52:07,324 | INFO     | zombie collector waiting for pid 2242298
[2026-03-03 06:05:07] 2026-03-03 04:52:07,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 06:05:07] 2026-03-03 04:52:07,324 | INFO     | collected zombie processes
[2026-03-03 06:05:07] 2026-03-03 04:52:07,324 | INFO     | will attempt to kill all subprocesses of pid=2242298
[2026-03-03 06:05:07] 2026-03-03 04:52:08,079 | INFO     | process IDs to be killed: [2242298] (in reverse order)
[2026-03-03 06:05:07] 2026-03-03 04:52:08,377 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 06:05:07] 2026-03-03 04:52:08,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 06:05:07] 2026-03-03 04:52:08,405 | INFO     | did not find any defunct processes belonging to 2242298
[2026-03-03 06:05:07] 2026-03-03 04:52:08,429 | INFO     | did not find any defunct processes belonging to 2242298
[2026-03-03 06:05:07] 2026-03-03 04:52:08,429 | INFO     | ready for new job
[2026-03-03 06:05:07] 2026-03-03 04:52:08,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 06:05:07] 2026-03-03 04:52:08,432 | INFO     | **************************************
[2026-03-03 06:05:07] 2026-03-03 04:52:08,432 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 06:05:07] 2026-03-03 04:52:08,432 | INFO     | **************************************
[2026-03-03 06:05:07] 2026-03-03 04:52:08,432 | INFO     | 
[2026-03-03 06:05:07] 2026-03-03 04:52:08,440 | INFO     | architecture information:
[2026-03-03 06:05:07] 2026-03-03 04:52:08,441 | INFO     | executing command: cat /etc/os-release
[2026-03-03 06:05:07] 2026-03-03 04:52:08,468 | INFO     | cat /etc/os-release:
[2026-03-03 06:05:07] NAME="CentOS Linux"
[2026-03-03 06:05:07] VERSION="7 (Core)"
[2026-03-03 06:05:07] ID="centos"
[2026-03-03 06:05:07] ID_LIKE="rhel fedora"
[2026-03-03 06:05:07] VERSION_ID="7"
[2026-03-03 06:05:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 06:05:07] ANSI_COLOR="0;31"
[2026-03-03 06:05:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 06:05:07] HOME_URL="https://www.centos.org/"
[2026-03-03 06:05:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 06:05:07] 
[2026-03-03 06:05:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 06:05:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 06:05:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 06:05:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 06:05:07] 
[2026-03-03 06:05:07] 2026-03-03 04:52:08,468 | INFO     | **************************************
[2026-03-03 06:05:07] 2026-03-03 04:52:08,971 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2026-03-03 06:05:07] 2026-03-03 04:52:08,999 | INFO     | sufficient remaining disk space (3327732482048 B)
[2026-03-03 06:05:07] 2026-03-03 04:52:08,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 06:05:07] 2026-03-03 04:52:09,000 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 06:05:07] 2026-03-03 04:52:09,000 | INFO     | update_server=False
[2026-03-03 06:05:07] 2026-03-03 04:52:09,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 06:05:07] 2026-03-03 04:52:09,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 06:05:07] 2026-03-03 04:52:09,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:05:07] 2026-03-03 04:52:09,055 | INFO     | aborting loop
[2026-03-03 06:05:07] 2026-03-03 04:52:09,135 | INFO     | all payload control threads have been joined
[2026-03-03 06:05:07] 2026-03-03 04:52:09,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 06:05:07] 2026-03-03 04:52:09,242 | INFO     | all data control threads have been joined
[2026-03-03 06:05:07] 2026-03-03 04:52:09,974 | INFO     | all job control threads have been joined
[2026-03-03 06:05:07] 2026-03-03 04:52:10,005 | INFO     | [job] retrieve thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,059 | INFO     | [job] job monitor thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,138 | INFO     | [payload] control thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,250 | INFO     | [data] control thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,417 | INFO     | [payload] validate_post thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,478 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,980 | INFO     | [job] control thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:10,988 | INFO     | [payload] failed_post thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:11,005 | INFO     | [data] copytool_out thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:11,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:05:07] 2026-03-03 04:52:11,294 | INFO     | [job] validate thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:11,305 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:11,376 | INFO     | [data] copytool_in thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:11,404 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:12,288 | INFO     | [job] queue monitor thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:13,165 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:19,795 | INFO     | job.realtimelogging is not enabled
[2026-03-03 06:05:07] 2026-03-03 04:52:20,799 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 06:05:07] 2026-03-03 04:52:39,795 | INFO     | PID=2227332 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 06:05:07] 2026-03-03 04:52:39,795 | INFO     | .. there are 19 such processes running
[2026-03-03 06:05:07] 2026-03-03 04:52:39,795 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 06:05:07] 2026-03-03 04:52:39,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 06:05:07] 2026-03-03 04:52:39,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 06:05:07] 2026-03-03 04:53:07,933 | INFO     | [monitor] cgroup control has ended
[2026-03-03 06:05:07] 2026-03-03 04:53:07,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23214091798336)>', '<ExcThread(monitor, started 23213848663808)>']
[2026-03-03 06:05:07] 2026-03-03 04:53:08,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 06:05:07] 2026-03-03 04:53:08,940 | INFO     | [monitor] control thread has ended
[2026-03-03 06:05:07] 2026-03-03 04:53:13,006 | INFO     | all workflow threads have been joined
[2026-03-03 06:05:07] 2026-03-03 04:53:13,007 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 06:05:07] 2026-03-03 04:53:13,007 | INFO     | traces error code: 0
[2026-03-03 06:05:07] 2026-03-03 04:53:13,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 06:05:07] 2026-03-03 04:53:13,160 [wrapper] ==== pilot stdout END ====
[2026-03-03 06:05:07] 2026-03-03 04:53:13,164 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 06:05:07] 2026-03-03 04:53:13,168 [wrapper] pilotpid: 2227332
[2026-03-03 06:05:07] 2026-03-03 04:53:13,173 [wrapper] Pilot exit status: 0
[2026-03-03 06:05:07] 2026-03-03 04:53:13,188 [wrapper] pandaids: 7033906806
[2026-03-03 06:05:07] 2026-03-03 04:53:13,387 [wrapper] cleanup supervisor_pilot 2491631 2227333
[2026-03-03 06:05:07] 2026-03-03 04:53:13,391 [wrapper] Test setup, not cleaning
[2026-03-03 06:05:07] 2026-03-03 04:53:13,397 [wrapper] apfmon messages muted
[2026-03-03 06:05:07] 2026-03-03 04:53:13,401 [wrapper] ==== wrapper stdout END ====
[2026-03-03 06:05:07] 2026-03-03 04:53:13,405 [wrapper] ==== wrapper stderr END ====
[2026-03-03 06:05:07]  *** Error codes and diagnostics ***
[2026-03-03 06:05:07]     "exeErrorCode": 0,
[2026-03-03 06:05:07]     "exeErrorDiag": "",
[2026-03-03 06:05:07]     "pilotErrorCode": 0,
[2026-03-03 06:05:07]     "pilotErrorDiag": "",
[2026-03-03 06:05:07]  *** Listing of results directory ***
[2026-03-03 06:05:07] total 469716
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc    584627 Feb 28 23:55 pilot3.tar.gz
[2026-03-03 06:05:07] -rwx------ 1 boinc boinc     36322 Feb 28 23:58 runpilot2-wrapper.sh
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc      5111 Mar  1 00:01 queuedata.json
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc       100 Mar  3 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 06:05:07] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 02:43 run_atlas
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc       105 Mar  3 02:43 job.xml
[2026-03-03 06:05:07] -rw-r--r-- 2 boinc boinc 270494960 Mar  3 02:43 EVNT.48343704._000076.pool.root.1
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc      6699 Mar  3 02:43 init_data.xml
[2026-03-03 06:05:07] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:43 start_atlas.sh
[2026-03-03 06:05:07] drwxrwx--x 2 boinc boinc      4096 Mar  3 02:43 shared
[2026-03-03 06:05:07] -rw-r--r-- 2 boinc boinc    597974 Mar  3 02:43 input.tar.gz
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc         0 Mar  3 02:43 boinc_lockfile
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc      2575 Mar  3 02:43 pandaJob.out
[2026-03-03 06:05:07] -rw------- 1 boinc boinc    997722 Mar  3 02:43 agis_schedconf.cvmfs.json
[2026-03-03 06:05:07] -rw------- 1 boinc boinc       443 Mar  3 02:43 workernode_map.json
[2026-03-03 06:05:07] drwx------ 5 boinc boinc      4096 Mar  3 02:43 pilot3
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc       528 Mar  3 05:51 boinc_task_state.xml
[2026-03-03 06:05:07] -rw------- 1 boinc boinc 202678527 Mar  3 05:51 HITS.48838536._001910.pool.root.1
[2026-03-03 06:05:07] -rw------- 1 boinc boinc        95 Mar  3 05:51 pilot_heartbeat.json
[2026-03-03 06:05:07] -rw------- 1 boinc boinc      1028 Mar  3 05:51 memory_monitor_summary.json
[2026-03-03 06:05:07] -rw------- 1 boinc boinc   1512931 Mar  3 05:52 agis_ddmendpoints.agis.ALL.json
[2026-03-03 06:05:07] -rw------- 1 boinc boinc    368784 Mar  3 05:52 log.48838536._001910.job.log.tgz.1
[2026-03-03 06:05:07] -rw------- 1 boinc boinc      6346 Mar  3 05:52 heartbeat.json
[2026-03-03 06:05:07] -rw------- 1 boinc boinc      4904 Mar  3 05:53 pilotlog.txt
[2026-03-03 06:05:07] -rw------- 1 boinc boinc   1573267 Mar  3 05:53 log.48838536._001910.job.log.1
[2026-03-03 06:05:07] -rw------- 1 boinc boinc       357 Mar  3 05:53 output.list
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc       620 Mar  3 05:53 runtime_log
[2026-03-03 06:05:07] -rw------- 1 boinc boinc   1955840 Mar  3 05:53 result.tar.gz
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc      9205 Mar  3 05:53 runtime_log.err
[2026-03-03 06:05:07] -rw------- 1 boinc boinc       666 Mar  3 05:53 1xUKDmdRiG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5K8KDm59BGCn.diag
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc        26 Mar  3 06:04 wrapper_checkpoint.txt
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc      8192 Mar  3 06:05 boinc_mmap_file
[2026-03-03 06:05:07] -rw-r--r-- 1 boinc boinc     21102 Mar  3 06:05 stderr.txt
[2026-03-03 06:05:07] HITS file was successfully produced:
[2026-03-03 06:05:07] -rw------- 1 boinc boinc 202678527 Mar  3 05:51 shared/HITS.pool.root.1
[2026-03-03 06:05:07]  *** Contents of shared directory: ***
[2026-03-03 06:05:07] total 464608
[2026-03-03 06:05:07] -rw-r--r-- 2 boinc boinc 270494960 Mar  3 02:43 ATLAS.root_0
[2026-03-03 06:05:07] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:43 start_atlas.sh
[2026-03-03 06:05:07] -rw-r--r-- 2 boinc boinc    597974 Mar  3 02:43 input.tar.gz
[2026-03-03 06:05:07] -rw------- 1 boinc boinc 202678527 Mar  3 05:51 HITS.pool.root.1
[2026-03-03 06:05:07] -rw------- 1 boinc boinc   1955840 Mar  3 05:53 result.tar.gz
06:05:08 (2215131): run_atlas exited; CPU time 43937.308457
06:05:08 (2215131): called boinc_finish(0)

</stderr_txt>
]]>

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