Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:17:41 (13525): wrapper (7.7.26015): starting
23:17:41 (13525): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 23:17:41] Arguments: --nthreads 8
[2026-02-28 23:17:41] Threads: 8
[2026-02-28 23:17:41] Checking for CVMFS
[2026-02-28 23:17:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 23:17:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 23:17:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 23:17:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 23:17:42] 2.11.2.0 4329 102652 254136 156756 3 50 16758846 18432000 1833 130560 0 51278078 99.956 4621590 21959 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-28 23:17:42] CVMFS is ok
[2026-02-28 23:17:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 23:17:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 23:17:42] Further information can be found at the LHC@home message board.
[2026-02-28 23:17:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 23:17:42] Checking for apptainer binary...
[2026-02-28 23:17:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 23:17:42] Running /usr/bin/apptainer --version
[2026-02-28 23:17:42] apptainer version 1.3.2-1.el7
[2026-02-28 23:17:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 23:17:43] c-206-17.aglt2.org
[2026-02-28 23:17:43] apptainer works
[2026-02-28 23:17:43] Set ATHENA_PROC_NUMBER=8
[2026-02-28 23:17:43] Set ATHENA_CORE_NUMBER=8
[2026-02-28 23:17:43] Starting ATLAS job with PandaID=7031188108
[2026-02-28 23:17:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 01:40:18]  *** The last 200 lines of the pilot log: ***
[2026-03-01 01:40:18] 2026-03-01 06:39:33,123 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,124 | INFO     | log transfer has been attempted: DONE
[2026-03-01 01:40:18] 2026-03-01 06:39:33,124 | INFO     | job 7031188108 has finished - writing final server update
[2026-03-01 01:40:18] 2026-03-01 06:39:33,124 | INFO     | total number of processed events: 400 (read)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,129 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7031188108/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,130 | INFO     | extracted standard info from prmon json
[2026-03-01 01:40:18] 2026-03-01 06:39:33,130 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 01:40:18] 2026-03-01 06:39:33,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 01:40:18] 2026-03-01 06:39:33,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 01:40:18] 2026-03-01 06:39:33,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 01:40:18] 2026-03-01 06:39:33,135 | INFO     | fitting pss+swap vs Time
[2026-03-01 01:40:18] 2026-03-01 06:39:33,135 | INFO     | sum of square deviations: 832722590.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,136 | INFO     | sum of deviations: 19060301316.000004
[2026-03-01 01:40:18] 2026-03-01 06:39:33,137 | INFO     | mean x: 1772342908.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,137 | INFO     | mean y: 2500488.5971223023
[2026-03-01 01:40:18] 2026-03-01 06:39:33,137 | INFO     | intersect: -40564898867.958916
[2026-03-01 01:40:18] 2026-03-01 06:39:33,137 | INFO     | chi2: 1.4557761482430969
[2026-03-01 01:40:18] 2026-03-01 06:39:33,138 | INFO     | sum of square deviations: 746051197.5
[2026-03-01 01:40:18] 2026-03-01 06:39:33,139 | INFO     | sum of deviations: 18446836394.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,139 | INFO     | mean x: 1772342755.5
[2026-03-01 01:40:18] 2026-03-01 06:39:33,139 | INFO     | mean y: 2499408.925373134
[2026-03-01 01:40:18] 2026-03-01 06:39:33,139 | INFO     | intersect: -43820386948.41425
[2026-03-01 01:40:18] 2026-03-01 06:39:33,140 | INFO     | chi2: 1.4569644762089997
[2026-03-01 01:40:18] 2026-03-01 06:39:33,140 | INFO     | current chi2=1.4569644762089997 (change=-0.08162848164101191 %)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,140 | INFO     | right removable region: 133
[2026-03-01 01:40:18] 2026-03-01 06:39:33,140 | INFO     | sum of square deviations: 746051197.5
[2026-03-01 01:40:18] 2026-03-01 06:39:33,141 | INFO     | sum of deviations: -2772876633.9999995
[2026-03-01 01:40:18] 2026-03-01 06:39:33,142 | INFO     | mean x: 1772343060.5
[2026-03-01 01:40:18] 2026-03-01 06:39:33,142 | INFO     | mean y: 2538385.0447761193
[2026-03-01 01:40:18] 2026-03-01 06:39:33,142 | INFO     | intersect: 6589872707.891295
[2026-03-01 01:40:18] 2026-03-01 06:39:33,142 | INFO     | chi2: 0.055614539342602916
[2026-03-01 01:40:18] 2026-03-01 06:39:33,143 | INFO     | current chi2=0.055614539342602916 (change=96.17973275563546 %)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,143 | INFO     | sum of square deviations: 665612480.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,144 | INFO     | sum of deviations: -6288854841.000001
[2026-03-01 01:40:18] 2026-03-01 06:39:33,144 | INFO     | mean x: 1772343213.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,144 | INFO     | mean y: 2544942.3333333335
[2026-03-01 01:40:18] 2026-03-01 06:39:33,145 | INFO     | intersect: 16748038048.154524
[2026-03-01 01:40:18] 2026-03-01 06:39:33,145 | INFO     | chi2: 0.009310833683021229
[2026-03-01 01:40:18] 2026-03-01 06:39:33,145 | INFO     | current chi2=0.009310833683021229 (change=83.25827419757343 %)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,145 | INFO     | sum of square deviations: 591173875.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,146 | INFO     | sum of deviations: -6151422786.5
[2026-03-01 01:40:18] 2026-03-01 06:39:33,147 | INFO     | mean x: 1772343365.5
[2026-03-01 01:40:18] 2026-03-01 06:39:33,147 | INFO     | mean y: 2544655.2016129033
[2026-03-01 01:40:18] 2026-03-01 06:39:33,147 | INFO     | intersect: 18444552709.158325
[2026-03-01 01:40:18] 2026-03-01 06:39:33,147 | INFO     | chi2: 0.00855231987278797
[2026-03-01 01:40:18] 2026-03-01 06:39:33,148 | INFO     | current chi2=0.00855231987278797 (change=8.146572434393791 %)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,148 | INFO     | left removable region: 30
[2026-03-01 01:40:18] 2026-03-01 06:39:33,148 | INFO     | sum of square deviations: 338804492.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,149 | INFO     | sum of deviations: -3774390493.999999
[2026-03-01 01:40:18] 2026-03-01 06:39:33,149 | INFO     | mean x: 1772343640.0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,149 | INFO     | mean y: 2539893.834951456
[2026-03-01 01:40:18] 2026-03-01 06:39:33,149 | INFO     | intersect: 19747015380.06126
[2026-03-01 01:40:18] 2026-03-01 06:39:33,150 | INFO     | chi2: 0.00781311292804706
[2026-03-01 01:40:18] 2026-03-01 06:39:33,150 | INFO     | current memory leak: -11.14 B/s (using 103 data points, chi2=0.01)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,150 | INFO     | could have reported an average CPU frequency of 2489 MHz (8 samples)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,151 | INFO     | ..............................
[2026-03-01 01:40:18] 2026-03-01 06:39:33,151 | INFO     | . Timing measurements:
[2026-03-01 01:40:18] 2026-03-01 06:39:33,151 | INFO     | . get job = 0 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,151 | INFO     | . initial setup = 5 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,151 | INFO     | . payload setup = 5 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,151 | INFO     | . stage-in = 0 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,152 | INFO     | . payload execution = 8470 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,152 | INFO     | . stage-out = 0 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,152 | INFO     | . log creation = 0 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,152 | INFO     | ..............................
[2026-03-01 01:40:18] 2026-03-01 06:39:33,305 | INFO     | 
[2026-03-01 01:40:18] 2026-03-01 06:39:33,306 | INFO     | job summary report
[2026-03-01 01:40:18] 2026-03-01 06:39:33,306 | INFO     | --------------------------------------------------
[2026-03-01 01:40:18] 2026-03-01 06:39:33,306 | INFO     | PanDA job id: 7031188108
[2026-03-01 01:40:18] 2026-03-01 06:39:33,306 | INFO     | task id: 48842466
[2026-03-01 01:40:18] 2026-03-01 06:39:33,306 | INFO     | errors: (none)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,307 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 01:40:18] 2026-03-01 06:39:33,307 | INFO     | pilot state: finished 
[2026-03-01 01:40:18] 2026-03-01 06:39:33,307 | INFO     | transexitcode: 0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,307 | INFO     | exeerrorcode: 0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,307 | INFO     | exeerrordiag: 
[2026-03-01 01:40:18] 2026-03-01 06:39:33,307 | INFO     | exitcode: 0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,308 | INFO     | exitmsg: OK
[2026-03-01 01:40:18] 2026-03-01 06:39:33,308 | INFO     | cpuconsumptiontime: 63361 s
[2026-03-01 01:40:18] 2026-03-01 06:39:33,308 | INFO     | nevents: 400
[2026-03-01 01:40:18] 2026-03-01 06:39:33,308 | INFO     | neventsw: 0
[2026-03-01 01:40:18] 2026-03-01 06:39:33,308 | INFO     | pid: 22172
[2026-03-01 01:40:18] 2026-03-01 06:39:33,308 | INFO     | pgrp: 22172
[2026-03-01 01:40:18] 2026-03-01 06:39:33,309 | INFO     | corecount: 8
[2026-03-01 01:40:18] 2026-03-01 06:39:33,309 | INFO     | event service: False
[2026-03-01 01:40:18] 2026-03-01 06:39:33,309 | INFO     | sizes: {0: 2282130, 1: 2282364, 11: 2282364, 8480: 2310342, 8481: 2319396, 8484: 2319534}
[2026-03-01 01:40:18] 2026-03-01 06:39:33,309 | INFO     | --------------------------------------------------
[2026-03-01 01:40:18] 2026-03-01 06:39:33,309 | INFO     | 
[2026-03-01 01:40:18] 2026-03-01 06:39:33,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-01 01:40:18] 2026-03-01 06:39:33,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,328 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,328 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,328 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,331 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 01:40:18] 2026-03-01 06:39:33,331 | INFO     | job 7031188108 has completed (purged errors)
[2026-03-01 01:40:18] 2026-03-01 06:39:33,332 | INFO     | overall cleanup function is called
[2026-03-01 01:40:18] 2026-03-01 06:39:34,340 | INFO     | --- collectZombieJob: --- 10, [22172]
[2026-03-01 01:40:18] 2026-03-01 06:39:34,340 | INFO     | zombie collector waiting for pid 22172
[2026-03-01 01:40:18] 2026-03-01 06:39:34,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 01:40:18] 2026-03-01 06:39:34,341 | INFO     | collected zombie processes
[2026-03-01 01:40:18] 2026-03-01 06:39:34,341 | INFO     | will attempt to kill all subprocesses of pid=22172
[2026-03-01 01:40:18] 2026-03-01 06:39:34,502 | INFO     | process IDs to be killed: [22172] (in reverse order)
[2026-03-01 01:40:18] 2026-03-01 06:39:34,571 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 01:40:18] 2026-03-01 06:39:34,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 01:40:18] 2026-03-01 06:39:34,576 | INFO     | did not find any defunct processes belonging to 22172
[2026-03-01 01:40:18] 2026-03-01 06:39:34,582 | INFO     | did not find any defunct processes belonging to 22172
[2026-03-01 01:40:18] 2026-03-01 06:39:34,582 | INFO     | ready for new job
[2026-03-01 01:40:18] 2026-03-01 06:39:34,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 01:40:18] 2026-03-01 06:39:34,584 | INFO     | **************************************
[2026-03-01 01:40:18] 2026-03-01 06:39:34,584 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 01:40:18] 2026-03-01 06:39:34,584 | INFO     | **************************************
[2026-03-01 01:40:18] 2026-03-01 06:39:34,584 | INFO     | 
[2026-03-01 01:40:18] 2026-03-01 06:39:34,586 | INFO     | architecture information:
[2026-03-01 01:40:18] 2026-03-01 06:39:34,586 | INFO     | executing command: cat /etc/os-release
[2026-03-01 01:40:18] 2026-03-01 06:39:34,602 | INFO     | cat /etc/os-release:
[2026-03-01 01:40:18] NAME="CentOS Linux"
[2026-03-01 01:40:18] VERSION="7 (Core)"
[2026-03-01 01:40:18] ID="centos"
[2026-03-01 01:40:18] ID_LIKE="rhel fedora"
[2026-03-01 01:40:18] VERSION_ID="7"
[2026-03-01 01:40:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 01:40:18] ANSI_COLOR="0;31"
[2026-03-01 01:40:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 01:40:18] HOME_URL="https://www.centos.org/"
[2026-03-01 01:40:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 01:40:18] 
[2026-03-01 01:40:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 01:40:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 01:40:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 01:40:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 01:40:18] 
[2026-03-01 01:40:18] 2026-03-01 06:39:34,602 | INFO     | **************************************
[2026-03-01 01:40:18] 2026-03-01 06:39:35,105 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-01 01:40:18] 2026-03-01 06:39:35,121 | INFO     | sufficient remaining disk space (28195160064 B)
[2026-03-01 01:40:18] 2026-03-01 06:39:35,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 01:40:18] 2026-03-01 06:39:35,122 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 01:40:18] 2026-03-01 06:39:35,122 | INFO     | update_server=False
[2026-03-01 01:40:18] 2026-03-01 06:39:35,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 01:40:18] 2026-03-01 06:39:35,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 01:40:18] 2026-03-01 06:39:35,401 | INFO     | all data control threads have been joined
[2026-03-01 01:40:18] 2026-03-01 06:39:35,430 | INFO     | all job control threads have been joined
[2026-03-01 01:40:18] 2026-03-01 06:39:35,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 01:40:18] 2026-03-01 06:39:36,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 01:40:18] 2026-03-01 06:39:36,070 | INFO     | aborting loop
[2026-03-01 01:40:18] 2026-03-01 06:39:36,124 | INFO     | [job] retrieve thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,130 | INFO     | [job] queue monitor thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,176 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,177 | INFO     | [data] copytool_in thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,323 | INFO     | all payload control threads have been joined
[2026-03-01 01:40:18] 2026-03-01 06:39:36,406 | INFO     | [data] control thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,435 | INFO     | [job] control thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 01:40:18] 2026-03-01 06:39:36,580 | INFO     | [payload] validate_post thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,774 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:36,787 | INFO     | [job] validate thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:37,075 | INFO     | [job] job monitor thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:37,202 | INFO     | [payload] failed_post thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:37,328 | INFO     | [payload] control thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:37,546 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:37,548 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:37,739 | INFO     | [data] copytool_out thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:39:40,486 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 01:40:18] 2026-03-01 06:40:04,637 | INFO     | PID=17515 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 01:40:18] 2026-03-01 06:40:04,638 | INFO     | .. there are 3 such processes running
[2026-03-01 01:40:18] 2026-03-01 06:40:04,639 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 01:40:18] 2026-03-01 06:40:04,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 01:40:18] 2026-03-01 06:40:04,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 01:40:18] 2026-03-01 06:40:11,316 | INFO     | [monitor] cgroup control has ended
[2026-03-01 01:40:18] 2026-03-01 06:40:13,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677404137280)>', '<ExcThread(monitor, started 140676729652992)>']
[2026-03-01 01:40:18] 2026-03-01 06:40:13,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 01:40:18] 2026-03-01 06:40:13,681 | INFO     | [monitor] control thread has ended
[2026-03-01 01:40:18] 2026-03-01 06:40:18,422 | INFO     | all workflow threads have been joined
[2026-03-01 01:40:18] 2026-03-01 06:40:18,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 01:40:18] 2026-03-01 06:40:18,422 | INFO     | traces error code: 0
[2026-03-01 01:40:18] 2026-03-01 06:40:18,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 01:40:18] 2026-03-01 06:40:18,509 [wrapper] ==== pilot stdout END ====
[2026-03-01 01:40:18] 2026-03-01 06:40:18,511 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 01:40:18] 2026-03-01 06:40:18,513 [wrapper] pilotpid: 17515
[2026-03-01 01:40:18] 2026-03-01 06:40:18,515 [wrapper] Pilot exit status: 0
[2026-03-01 01:40:18] 2026-03-01 06:40:18,523 [wrapper] pandaids: 7031188108
[2026-03-01 01:40:18] 2026-03-01 06:40:18,559 [wrapper] cleanup supervisor_pilot 21109 17516
[2026-03-01 01:40:18] 2026-03-01 06:40:18,560 [wrapper] Test setup, not cleaning
[2026-03-01 01:40:18] 2026-03-01 06:40:18,563 [wrapper] apfmon messages muted
[2026-03-01 01:40:18] 2026-03-01 06:40:18,565 [wrapper] ==== wrapper stdout END ====
[2026-03-01 01:40:18] 2026-03-01 06:40:18,567 [wrapper] ==== wrapper stderr END ====
[2026-03-01 01:40:18]  *** Error codes and diagnostics ***
[2026-03-01 01:40:18]     "exeErrorCode": 0,
[2026-03-01 01:40:18]     "exeErrorDiag": "",
[2026-03-01 01:40:18]     "pilotErrorCode": 0,
[2026-03-01 01:40:18]     "pilotErrorDiag": "",
[2026-03-01 01:40:18]  *** Listing of results directory ***
[2026-03-01 01:40:18] total 417744
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas    584627 Feb 26 23:02 pilot3.tar.gz
[2026-03-01 01:40:18] -rwx------ 1 boincer umatlas     36322 Feb 26 23:03 runpilot2-wrapper.sh
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas      5111 Feb 26 23:03 queuedata.json
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas       100 Feb 28 23:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 01:40:18] -rwxr-xr-x 1 boincer umatlas      7986 Feb 28 23:17 run_atlas
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas       105 Feb 28 23:17 job.xml
[2026-03-01 01:40:18] -rw-r--r-- 2 boincer umatlas 250579761 Feb 28 23:17 EVNT.48448235._000002.pool.root.1
[2026-03-01 01:40:18] -rw-r--r-- 2 boincer umatlas     15845 Feb 28 23:17 start_atlas.sh
[2026-03-01 01:40:18] drwxrwx--x 2 boincer umatlas      4096 Feb 28 23:17 shared
[2026-03-01 01:40:18] -rw-r--r-- 2 boincer umatlas    597969 Feb 28 23:17 input.tar.gz
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas         0 Feb 28 23:17 boinc_lockfile
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas      2612 Feb 28 23:17 pandaJob.out
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas        57 Feb 28 23:17 setup.sh.local
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas    998790 Feb 28 23:17 agis_schedconf.cvmfs.json
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas   1513015 Feb 28 23:17 agis_ddmendpoints.agis.ALL.json
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas       445 Feb 28 23:17 workernode_map.json
[2026-03-01 01:40:18] drwx------ 5 boincer umatlas      4096 Feb 28 23:17 pilot3
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas      5950 Mar  1 01:37 init_data.xml
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas 170080267 Mar  1 01:38 HITS.48842466._000035.pool.root.1
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas       530 Mar  1 01:39 boinc_task_state.xml
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas      1054 Mar  1 01:39 memory_monitor_summary.json
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas    380767 Mar  1 01:39 log.48842466._000035.job.log.tgz.1
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas      6417 Mar  1 01:39 heartbeat.json
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas      8192 Mar  1 01:40 boinc_mmap_file
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas        27 Mar  1 01:40 wrapper_checkpoint.txt
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas        95 Mar  1 01:40 pilot_heartbeat.json
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas      4817 Mar  1 01:40 pilotlog.txt
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas   1209152 Mar  1 01:40 log.48842466._000035.job.log.1
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas       357 Mar  1 01:40 output.list
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas       620 Mar  1 01:40 runtime_log
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas   1607680 Mar  1 01:40 result.tar.gz
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas      9341 Mar  1 01:40 runtime_log.err
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas       658 Mar  1 01:40 PdQNDmaF4F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLJ4KDmV0U5An.diag
[2026-03-01 01:40:18] -rw-r--r-- 1 boincer umatlas     21028 Mar  1 01:40 stderr.txt
[2026-03-01 01:40:18] HITS file was successfully produced:
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas 170080267 Mar  1 01:38 shared/HITS.pool.root.1
[2026-03-01 01:40:18]  *** Contents of shared directory: ***
[2026-03-01 01:40:18] total 412980
[2026-03-01 01:40:18] -rw-r--r-- 2 boincer umatlas 250579761 Feb 28 23:17 ATLAS.root_0
[2026-03-01 01:40:18] -rw-r--r-- 2 boincer umatlas     15845 Feb 28 23:17 start_atlas.sh
[2026-03-01 01:40:18] -rw-r--r-- 2 boincer umatlas    597969 Feb 28 23:17 input.tar.gz
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas 170080267 Mar  1 01:38 HITS.pool.root.1
[2026-03-01 01:40:18] -rw------- 1 boincer umatlas   1607680 Mar  1 01:40 result.tar.gz
01:40:20 (13525): run_atlas exited; CPU time 63453.906446
01:40:20 (13525): called boinc_finish(0)

</stderr_txt>
]]>

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