Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
23:30:27 (1613369): wrapper (7.7.26015): starting
23:30:27 (1613369): wrapper: running run_atlas (--nthreads 12)
[2026-02-28 23:30:27] Arguments: --nthreads 12
[2026-02-28 23:30:27] Threads: 12
[2026-02-28 23:30:27] Checking for CVMFS
[2026-02-28 23:30:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 23:30:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 23:30:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 23:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 23:30:27] 2.13.2.0 1250947 254 57472 156759 1 187 11419342 16777216 852 130560 0 502259 99.991 13814 694 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-02-28 23:30:27] CVMFS is ok
[2026-02-28 23:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 23:30:27] Checking for apptainer binary...
[2026-02-28 23:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 23:30:27] Running /usr/bin/apptainer --version
[2026-02-28 23:30:27] apptainer version 1.3.0-bp160.1.36
[2026-02-28 23:30:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 23:30:27] boinc-runner
[2026-02-28 23:30:27] apptainer works
[2026-02-28 23:30:27] Set ATHENA_PROC_NUMBER=12
[2026-02-28 23:30:27] Set ATHENA_CORE_NUMBER=12
[2026-02-28 23:30:27] Starting ATLAS job with PandaID=7034076699
[2026-02-28 23:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 23:54:42]  *** The last 200 lines of the pilot log: ***
[2026-02-28 23:54:42]  guid=34d058d0-9855-4076-8438-79bc65116d9a
[2026-02-28 23:54:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-28 23:54:42]  is_altstaged=None
[2026-02-28 23:54:42]  is_tar=False
[2026-02-28 23:54:42]  lfn=log.48700930._000658.job.log.tgz.1
[2026-02-28 23:54:42]  mtime=0
[2026-02-28 23:54:42]  protocol_id=None
[2026-02-28 23:54:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-28 23:54:42]  replicas=None
[2026-02-28 23:54:42]  scope=mc23_13p6TeV
[2026-02-28 23:54:42]  status=None
[2026-02-28 23:54:42]  status_code=0
[2026-02-28 23:54:42]  storage_token=
[2026-02-28 23:54:42]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-7034076699/log.48700930._000658.job.log.tgz.1
[2026-02-28 23:54:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/04/log.48700930._000658.job.log.tgz.1
[2026-02-28 23:54:42]  workdir=None
[2026-02-28 23:54:42] ]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,372 | INFO     | transferring file log.48700930._000658.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-7034076699/log.48700930._000658.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-28 23:54:42] 2026-03-01 05:54:02,373 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-7034076699/log.48700930._000658.job.log.tgz.1 /var/lib/boinc/slots/2/log.48700930._000658.job
[2026-02-28 23:54:42] 2026-03-01 05:54:02,382 | INFO     | adding to output.list: log.48700930._000658.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/04/log.48700930._000658.job.log.tg
[2026-02-28 23:54:42] 2026-03-01 05:54:02,382 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-28 23:54:42] 2026-03-01 05:54:02,382 | INFO     | summary of transferred files:
[2026-02-28 23:54:42] 2026-03-01 05:54:02,382 | INFO     |  -- lfn=log.48700930._000658.job.log.tgz.1, status_code=0, status=transferred
[2026-02-28 23:54:42] 2026-03-01 05:54:02,382 | INFO     | stage-out finished correctly
[2026-02-28 23:54:42] 2026-03-01 05:54:02,410 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 23:54:42] 2026-03-01 05:54:02,630 | INFO     | job 7034076699 has state=finished
[2026-02-28 23:54:42] 2026-03-01 05:54:02,630 | INFO     | preparing for final server update for job 7034076699 in state='finished'
[2026-02-28 23:54:42] 2026-03-01 05:54:02,630 | INFO     | reading metadata from: /var/lib/boinc/slots/2/PanDA_Pilot-7034076699/jobReport.json
[2026-02-28 23:54:42] 2026-03-01 05:54:02,631 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/2/workernode_map.json
[2026-02-28 23:54:42] 2026-03-01 05:54:02,632 | INFO     | this job has now completed (state=finished)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,632 | INFO     | log transfer has been attempted: DONE
[2026-02-28 23:54:42] 2026-03-01 05:54:02,632 | INFO     | job 7034076699 has finished - writing final server update
[2026-02-28 23:54:42] 2026-03-01 05:54:02,632 | INFO     | total number of processed events: 400 (read)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7034076699/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | INFO     | extracted standard info from prmon json
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | INFO     | fitting pss+swap vs Time
[2026-02-28 23:54:42] 2026-03-01 05:54:02,635 | INFO     | sum of square deviations: 1265140.0
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | sum of deviations: -82149005.0
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | mean x: 1772343811.5
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | mean y: 2860978.75
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | intersect: 115085998522.92105
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | chi2: 0.000754109626718815
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | current memory leak: -64.93 B/s (using 16 data points, chi2=0.00)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | could have reported an average CPU frequency of 3818 MHz (4 samples)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | ..............................
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . Timing measurements:
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . get job = 0 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . initial setup = 4 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . payload setup = 1 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . stage-in = 0 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . payload execution = 1390 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . stage-out = 0 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | . log creation = 0 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,636 | INFO     | ..............................
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | 
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | job summary report
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | --------------------------------------------------
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | PanDA job id: 7034076699
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | task id: 48700930
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | errors: (none)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | pilot state: finished 
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | transexitcode: 0
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | exeerrorcode: 0
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | exeerrordiag: 
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | exitcode: 0
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | exitmsg: OK
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | cpuconsumptiontime: 14944 s
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | nevents: 400
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | neventsw: 0
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | pid: 1622037
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | pgrp: 1622037
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | corecount: 12
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | event service: False
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | sizes: {0: 2282207, 10: 2282207, 1395: 2306901, 1397: 2316093}
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | --------------------------------------------------
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | 
[2026-02-28 23:54:42] 2026-03-01 05:54:02,662 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | job 7034076699 has completed (purged errors)
[2026-02-28 23:54:42] 2026-03-01 05:54:02,673 | INFO     | overall cleanup function is called
[2026-02-28 23:54:42] 2026-03-01 05:54:03,225 | WARNING  | process 1622037 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 23:54:42] 2026-03-01 05:54:03,260 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 23:54:42] 2026-03-01 05:54:03,307 | INFO     | number of running child processes to parent process 1622037: 1
[2026-02-28 23:54:42] 2026-03-01 05:54:03,307 | INFO     | maximum number of monitored processes: 6
[2026-02-28 23:54:42] 2026-03-01 05:54:03,307 | INFO     | aborting job monitoring since job object (job id=7034076699) has expired
[2026-02-28 23:54:42] 2026-03-01 05:54:03,682 | INFO     | --- collectZombieJob: --- 10, [1622037]
[2026-02-28 23:54:42] 2026-03-01 05:54:03,682 | INFO     | zombie collector waiting for pid 1622037
[2026-02-28 23:54:42] 2026-03-01 05:54:03,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 23:54:42] 2026-03-01 05:54:03,682 | INFO     | collected zombie processes
[2026-02-28 23:54:42] 2026-03-01 05:54:03,682 | INFO     | will attempt to kill all subprocesses of pid=1622037
[2026-02-28 23:54:42] 2026-03-01 05:54:03,729 | INFO     | process IDs to be killed: [1622037] (in reverse order)
[2026-02-28 23:54:42] 2026-03-01 05:54:03,755 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 23:54:42] 2026-03-01 05:54:03,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 23:54:42] 2026-03-01 05:54:03,757 | INFO     | did not find any defunct processes belonging to 1622037
[2026-02-28 23:54:42] 2026-03-01 05:54:03,758 | INFO     | did not find any defunct processes belonging to 1622037
[2026-02-28 23:54:42] 2026-03-01 05:54:03,758 | INFO     | ready for new job
[2026-02-28 23:54:42] 2026-03-01 05:54:03,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 23:54:42] 2026-03-01 05:54:03,759 | INFO     | **************************************
[2026-02-28 23:54:42] 2026-03-01 05:54:03,759 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 23:54:42] 2026-03-01 05:54:03,759 | INFO     | **************************************
[2026-02-28 23:54:42] 2026-03-01 05:54:03,759 | INFO     | 
[2026-02-28 23:54:42] 2026-03-01 05:54:03,760 | INFO     | architecture information:
[2026-02-28 23:54:42] 2026-03-01 05:54:03,760 | INFO     | executing command: cat /etc/os-release
[2026-02-28 23:54:42] 2026-03-01 05:54:03,765 | INFO     | cat /etc/os-release:
[2026-02-28 23:54:42] NAME="CentOS Linux"
[2026-02-28 23:54:42] VERSION="7 (Core)"
[2026-02-28 23:54:42] ID="centos"
[2026-02-28 23:54:42] ID_LIKE="rhel fedora"
[2026-02-28 23:54:42] VERSION_ID="7"
[2026-02-28 23:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 23:54:42] ANSI_COLOR="0;31"
[2026-02-28 23:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 23:54:42] HOME_URL="https://www.centos.org/"
[2026-02-28 23:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 23:54:42] 
[2026-02-28 23:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 23:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 23:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 23:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 23:54:42] 
[2026-02-28 23:54:42] 2026-03-01 05:54:03,766 | INFO     | **************************************
[2026-02-28 23:54:42] 2026-03-01 05:54:04,268 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | INFO     | sufficient remaining disk space (3859431817216 B)
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | INFO     | update_server=False
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 23:54:42] 2026-03-01 05:54:04,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 23:54:42] 2026-03-01 05:54:04,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 23:54:42] 2026-03-01 05:54:04,276 | INFO     | will abort loop
[2026-02-28 23:54:42] 2026-03-01 05:54:04,667 | INFO     | all payload control threads have been joined
[2026-02-28 23:54:42] 2026-03-01 05:54:04,712 | INFO     | job.realtimelogging is not enabled
[2026-02-28 23:54:42] 2026-03-01 05:54:05,257 | INFO     | all data control threads have been joined
[2026-02-28 23:54:42] 2026-03-01 05:54:05,280 | INFO     | [job] queue monitor thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:05,280 | INFO     | [job] retrieve thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:05,281 | INFO     | [job] job monitor thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:05,410 | INFO     | all job control threads have been joined
[2026-02-28 23:54:42] 2026-03-01 05:54:05,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 23:54:42] 2026-03-01 05:54:05,672 | INFO     | [payload] control thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:05,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:05,899 | INFO     | [payload] failed_post thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:05,955 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,263 | INFO     | [data] control thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,400 | INFO     | [payload] validate_post thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,415 | INFO     | [job] control thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,443 | INFO     | [job] validate thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,470 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,587 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:06,713 | INFO     | [data] copytool_in thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:07,420 | INFO     | [data] copytool_out thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:08,281 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 23:54:42] 2026-03-01 05:54:33,800 | INFO     | PID=1617252 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 23:54:42] 2026-03-01 05:54:33,800 | INFO     | .. there are 2 such processes running
[2026-02-28 23:54:42] 2026-03-01 05:54:33,800 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 23:54:42] 2026-03-01 05:54:33,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 23:54:42] 2026-03-01 05:54:33,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 23:54:42] 2026-03-01 05:54:36,555 | INFO     | [monitor] cgroup control has ended
[2026-02-28 23:54:42] 2026-03-01 05:54:37,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898898802496)>', '<ExcThread(monitor, started 139898409441024)>']
[2026-02-28 23:54:42] 2026-03-01 05:54:37,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 23:54:42] 2026-03-01 05:54:37,820 | INFO     | [monitor] control thread has ended
[2026-02-28 23:54:42] 2026-03-01 05:54:42,376 | INFO     | all workflow threads have been joined
[2026-02-28 23:54:42] 2026-03-01 05:54:42,377 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 23:54:42] 2026-03-01 05:54:42,377 | INFO     | traces error code: 0
[2026-02-28 23:54:42] 2026-03-01 05:54:42,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 23:54:42] 2026-03-01 05:54:42,425 [wrapper] ==== pilot stdout END ====
[2026-02-28 23:54:42] 2026-03-01 05:54:42,426 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 23:54:42] 2026-03-01 05:54:42,427 [wrapper] pilotpid: 1617252
[2026-02-28 23:54:42] 2026-03-01 05:54:42,428 [wrapper] Pilot exit status: 0
[2026-02-28 23:54:42] 2026-03-01 05:54:42,432 [wrapper] pandaids: 7034076699
[2026-02-28 23:54:42] 2026-03-01 05:54:42,449 [wrapper] cleanup supervisor_pilot 1637490 1617253
[2026-02-28 23:54:42] 2026-03-01 05:54:42,450 [wrapper] Test setup, not cleaning
[2026-02-28 23:54:42] 2026-03-01 05:54:42,451 [wrapper] apfmon messages muted
[2026-02-28 23:54:42] 2026-03-01 05:54:42,453 [wrapper] ==== wrapper stdout END ====
[2026-02-28 23:54:42] 2026-03-01 05:54:42,454 [wrapper] ==== wrapper stderr END ====
[2026-02-28 23:54:42]  *** Error codes and diagnostics ***
[2026-02-28 23:54:42]     "exeErrorCode": 0,
[2026-02-28 23:54:42]     "exeErrorDiag": "",
[2026-02-28 23:54:42]     "pilotErrorCode": 0,
[2026-02-28 23:54:42]     "pilotErrorDiag": "",
[2026-02-28 23:54:42]  *** Listing of results directory ***
[2026-02-28 23:54:42] total 335600
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc      5111 Feb 28 18:35 queuedata.json
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc    584627 Feb 28 18:35 pilot3.tar.gz
[2026-02-28 23:54:42] -rwx------. 1 boinc boinc     36322 Feb 28 18:35 runpilot2-wrapper.sh
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc       100 Feb 28 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 23:54:42] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 23:30 run_atlas
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc       105 Feb 28 23:30 job.xml
[2026-02-28 23:54:42] -rw-r--r--. 2 boinc boinc 189820989 Feb 28 23:30 EVNT.48700928._000027.pool.root.1
[2026-02-28 23:54:42] -rw-r--r--. 2 boinc boinc     15845 Feb 28 23:30 start_atlas.sh
[2026-02-28 23:54:42] drwxrwx--x. 1 boinc boinc        76 Feb 28 23:30 shared
[2026-02-28 23:54:42] -rw-r--r--. 2 boinc boinc    597935 Feb 28 23:30 input.tar.gz
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc     10049 Feb 28 23:30 init_data.xml
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc         0 Feb 28 23:30 boinc_setup_complete
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc         0 Feb 28 23:30 boinc_lockfile
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc      2515 Feb 28 23:30 pandaJob.out
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc        63 Feb 28 23:30 setup.sh.local
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc    998782 Feb 28 23:30 agis_schedconf.cvmfs.json
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc   1513015 Feb 28 23:30 agis_ddmendpoints.agis.ALL.json
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc       427 Feb 28 23:30 workernode_map.json
[2026-02-28 23:54:42] drwx------. 1 boinc boinc       414 Feb 28 23:30 pilot3
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc        95 Feb 28 23:53 pilot_heartbeat.json
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc 148765637 Feb 28 23:53 HITS.48700930._000658.pool.root.1
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc       529 Feb 28 23:53 boinc_task_state.xml
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc      1027 Feb 28 23:53 memory_monitor_summary.json
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc    325036 Feb 28 23:54 log.48700930._000658.job.log.tgz.1
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc      6332 Feb 28 23:54 heartbeat.json
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc        27 Feb 28 23:54 wrapper_checkpoint.txt
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc      8192 Feb 28 23:54 boinc_mmap_file
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc      4895 Feb 28 23:54 pilotlog.txt
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc    246928 Feb 28 23:54 log.48700930._000658.job.log.1
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc       357 Feb 28 23:54 output.list
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc       620 Feb 28 23:54 runtime_log
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc    593920 Feb 28 23:54 result.tar.gz
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc      9395 Feb 28 23:54 runtime_log.err
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc       649 Feb 28 23:54 ouQKDmpxjG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfQ8KDmkMgq2n.diag
[2026-02-28 23:54:42] -rw-r--r--. 1 boinc boinc     21018 Feb 28 23:54 stderr.txt
[2026-02-28 23:54:42] HITS file was successfully produced:
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc 148765637 Feb 28 23:53 shared/HITS.pool.root.1
[2026-02-28 23:54:42]  *** Contents of shared directory: ***
[2026-02-28 23:54:42] total 331836
[2026-02-28 23:54:42] -rw-r--r--. 2 boinc boinc 189820989 Feb 28 23:30 ATLAS.root_0
[2026-02-28 23:54:42] -rw-r--r--. 2 boinc boinc     15845 Feb 28 23:30 start_atlas.sh
[2026-02-28 23:54:42] -rw-r--r--. 2 boinc boinc    597935 Feb 28 23:30 input.tar.gz
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc 148765637 Feb 28 23:53 HITS.pool.root.1
[2026-02-28 23:54:42] -rw-------. 1 boinc boinc    593920 Feb 28 23:54 result.tar.gz
23:54:43 (1613369): run_atlas exited; CPU time 14946.049228
23:54:43 (1613369): called boinc_finish(0)

</stderr_txt>
]]>

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