Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-01 06:19:14 (599586): vboxwrapper version 26210
2026-03-01 06:19:14 (599586): BOINC client version: 8.2.8
2026-03-01 06:19:14 (599586): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-01 06:19:14 (599586): Successfully copied 'init_data.xml' to the shared directory.
2026-03-01 06:19:14 (599586): Create VM. (boinc_323ed5bf89c96452, slot#17)
2026-03-01 06:19:14 (599586): Setting Memory Size for VM. (4096MB)
2026-03-01 06:19:15 (599586): Setting CPU Count for VM. (1)
2026-03-01 06:19:15 (599586): Setting Chipset Options for VM.
2026-03-01 06:19:15 (599586): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-01 06:19:15 (599586): Setting Boot Options for VM.
2026-03-01 06:19:15 (599586): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-01 06:19:15 (599586): Enabling VM Network Access.
2026-03-01 06:19:16 (599586): Disabling USB Support for VM.
2026-03-01 06:19:16 (599586): Disabling COM Port Support for VM.
2026-03-01 06:19:16 (599586): Disabling LPT Port Support for VM.
2026-03-01 06:19:16 (599586): Disabling Audio Support for VM.
2026-03-01 06:19:16 (599586): Disabling Clipboard Support for VM.
2026-03-01 06:19:16 (599586): Disabling Drag and Drop Support for VM.
2026-03-01 06:19:16 (599586): Adding storage controller(s) to VM.
2026-03-01 06:19:16 (599586): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-01 06:19:17 (599586): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-01 06:19:17 (599586): forwarding host port 52677 to guest port 80
2026-03-01 06:19:17 (599586): Enabling remote desktop for VM.
2026-03-01 06:19:17 (599586): Enabling shared directory for VM.
2026-03-01 06:19:18 (599586): Starting VM using VBoxManage interface. (boinc_323ed5bf89c96452, slot#17)
2026-03-01 06:19:19 (599586): Successfully started VM. (PID = '599998')
2026-03-01 06:19:19 (599586): Reporting VM Process ID to BOINC.
2026-03-01 06:19:19 (599586): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-01 06:19:19 (599586): Guest Log: CPUID EDX: 0x178bfbff
2026-03-01 06:19:19 (599586): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-01 06:19:19 (599586): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-01 06:19:19 (599586): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-01 06:19:19 (599586): Detected: Web Application Enabled (http://localhost:52677)
2026-03-01 06:19:19 (599586): Detected: Remote Desktop Enabled (localhost:33275)
2026-03-01 06:19:19 (599586): Preference change detected
2026-03-01 06:19:19 (599586): Setting CPU throttle for VM. (100%)
2026-03-01 06:19:19 (599586): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-01 06:19:21 (599586): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-01 06:19:21 (599586): Guest Log: BIOS: Booting from Hard Disk...
2026-03-01 06:19:25 (599586): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-01 06:19:25 (599586): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-01 06:19:25 (599586): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-01 06:19:32 (599586): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-01 06:19:32 (599586): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-01 06:19:48 (599586): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000412 main     Log opened 2026-03-01T05:19:45.828991000Z
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000677 main     OS Product: Linux
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000730 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000786 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000839 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000840 main     Process ID: 1241
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.000840 main     Package type: LINUX_64BITS_GENERIC
2026-03-01 06:19:48 (599586): Guest Log: 00:00:00.005261 main     5.2.32 r132073 started. Verbose level = 0
2026-03-01 06:19:48 (599586): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-01 06:19:48 (599586): Guest Log: [INFO] Mounting shared directory
2026-03-01 06:19:48 (599586): Guest Log: [INFO] Checking for init_data.xml
2026-03-01 06:19:52 (599586): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-01 06:19:52 (599586): Guest Log: [INFO] Detected branch: prod
2026-03-01 06:19:52 (599586): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-01 06:19:52 (599586): Guest Log: Copying input files
2026-03-01 06:19:55 (599586): Guest Log: Copied input files into RunAtlas.
2026-03-01 06:19:55 (599586): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-03-01 06:20:03 (599586): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-01 06:20:03 (599586): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-01 06:20:03 (599586): Guest Log: 2.6.3.0 1510 0 31544 156759 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-03-01 06:20:04 (599586): Guest Log: copied the webapp to /var/www
2026-03-01 06:20:04 (599586): Guest Log: core_number=1
2026-03-01 06:20:04 (599586): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-01 06:20:04 (599586): Guest Log:  *** Starting ATLAS job. (PandaID=7033906664 taskID=48838536) ***
2026-03-01 07:58:19 (599586): Status Report: Elapsed Time: '6000.000000'
2026-03-01 07:58:19 (599586): Status Report: CPU Time: '5891.080000'
2026-03-01 09:37:20 (599586): Status Report: Elapsed Time: '12000.000000'
2026-03-01 09:37:20 (599586): Status Report: CPU Time: '11817.090000'
2026-03-01 11:16:20 (599586): Status Report: Elapsed Time: '18000.000000'
2026-03-01 11:16:20 (599586): Status Report: CPU Time: '17743.400000'
2026-03-01 12:55:21 (599586): Status Report: Elapsed Time: '24000.000000'
2026-03-01 12:55:21 (599586): Status Report: CPU Time: '23669.540000'
2026-03-01 14:34:21 (599586): Status Report: Elapsed Time: '30000.000000'
2026-03-01 14:34:21 (599586): Status Report: CPU Time: '29595.780000'
2026-03-01 16:13:22 (599586): Status Report: Elapsed Time: '36000.000000'
2026-03-01 16:13:22 (599586): Status Report: CPU Time: '35522.090000'
2026-03-01 17:52:22 (599586): Status Report: Elapsed Time: '42000.000000'
2026-03-01 17:52:22 (599586): Status Report: CPU Time: '41448.250000'
2026-03-01 19:31:23 (599586): Status Report: Elapsed Time: '48000.000000'
2026-03-01 19:31:23 (599586): Status Report: CPU Time: '47375.240000'
2026-03-01 19:39:13 (599586): Guest Log:  *** Job finished ***
2026-03-01 19:39:13 (599586): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:33,351 | INFO     | all workflow threads have been joined
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:33,352 | INFO     | end of generic workflow (traces error code: 0)
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:33,352 | INFO     | traces error code: 0
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:33,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,593 | INFO     | PID=5850 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,594 | INFO     | found 0 job(s) in 20 queues
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,595 | INFO     | [monitor] control thread has ended
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,721 [wrapper] ==== pilot stdout END ====
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,728 [wrapper] ==== wrapper stdout RESUME ====
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,734 [wrapper] pilotpid: 5850
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,743 [wrapper] Pilot exit status: 0
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,783 [wrapper] pandaids: 7033906664
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,824 [wrapper] cleanup supervisor_pilot  5284 5851
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,831 [wrapper] Test setup, not cleaning
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,839 [wrapper] apfmon messages muted
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,846 [wrapper] ==== wrapper stdout END ====
2026-03-01 19:39:13 (599586): Guest Log: 2026-03-01 18:24:40,854 [wrapper] ==== wrapper stderr END ====
2026-03-01 19:39:13 (599586): Guest Log:  *** Error codes and diagnostics ***
2026-03-01 19:39:13 (599586): Guest Log:     "exeErrorCode": 0,
2026-03-01 19:39:13 (599586): Guest Log:     "exeErrorDiag": "",
2026-03-01 19:39:13 (599586): Guest Log:     "pilotErrorCode": 0,
2026-03-01 19:39:13 (599586): Guest Log:     "pilotErrorDiag": "",
2026-03-01 19:39:13 (599586): Guest Log:  *** Listing of results directory ***
2026-03-01 19:39:13 (599586): Guest Log: total 216544
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 28 22:55 pilot3.tar.gz
2026-03-01 19:39:13 (599586): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 28 22:56 runpilot2-wrapper.sh
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 28 22:57 queuedata.json
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar  1 05:19 start_atlas.sh
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas    597972 Mar  1 05:19 input.tar.gz
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas     10031 Mar  1 05:19 init_data.xml
2026-03-01 19:39:13 (599586): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  1 05:19 EVNT.48343704._000071.pool.root.1 -> /data/./ATLAS.root_0
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas      2574 Mar  1 05:20 pandaJob.out
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas        50 Mar  1 05:20 setup.sh.local
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas    998782 Mar  1 05:20 agis_schedconf.cvmfs.json
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas       418 Mar  1 05:20 workernode_map.json
2026-03-01 19:39:13 (599586): Guest Log: drwx------. 5 atlas atlas      4096 Mar  1 05:20 pilot3
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas 203380320 Mar  1 18:23 HITS.48838536._001782.pool.root.1
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas      1028 Mar  1 18:24 memory_monitor_summary.json
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas   1513015 Mar  1 18:24 agis_ddmendpoints.agis.ALL.json
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas    805271 Mar  1 18:24 log.48838536._001782.job.log.tgz.1
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas      6326 Mar  1 18:24 heartbeat.json
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas       744 Mar  1 18:24 pilotlog.txt
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas        95 Mar  1 18:24 pilot_heartbeat.json
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas   6443467 Mar  1 18:24 log.48838536._001782.job.log.1
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas       357 Mar  1 18:24 output.list
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  1 18:24 runtime_log
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas   7270400 Mar  1 18:24 result.tar.gz
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas       654 Mar  1 18:24 s0cKDmpPiG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSD8KDmbuqiUm.diag
2026-03-01 19:39:13 (599586): Guest Log: -rw-r--r--. 1 atlas atlas      9108 Mar  1 18:24 runtime_log.err
2026-03-01 19:39:13 (599586): Guest Log: Looking for outputfile HITS.48838536._001782.pool.root.1
2026-03-01 19:39:13 (599586): Guest Log: HITS file was successfully produced
2026-03-01 19:39:13 (599586): Guest Log: -rw-------. 1 atlas atlas 203380320 Mar  1 18:23 /home/atlas/RunAtlas/HITS.48838536._001782.pool.root.1
2026-03-01 19:39:13 (599586): Guest Log: Successfully finished the ATLAS job!
2026-03-01 19:39:13 (599586): Guest Log: Copying the results back to the shared directory!
2026-03-01 19:39:13 (599586): Guest Log:  *** Contents of shared directory: ***
2026-03-01 19:39:14 (599586): Guest Log: total 272012
2026-03-01 19:39:14 (599586): Guest Log: -rw-r--r--. 1 root root 270638969 Mar  1 05:19 ATLAS.root_0
2026-03-01 19:39:14 (599586): Guest Log: -rw-r--r--. 1 root root     10031 Mar  1 05:19 init_data.xml
2026-03-01 19:39:14 (599586): Guest Log: -rw-r--r--. 1 root root    597972 Mar  1 05:19 input.tar.gz
2026-03-01 19:39:14 (599586): Guest Log: -rw-r--r--. 1 root root   7270400 Mar  1  2026 result.tar.gz
2026-03-01 19:39:14 (599586): Guest Log: -rw-r--r--. 1 root root     15845 Mar  1 05:19 start_atlas.sh
2026-03-01 19:39:14 (599586): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-01 19:39:14 (599586): VM Completion File Detected.
2026-03-01 19:39:14 (599586): Powering off VM.
2026-03-01 19:39:15 (599586): Successfully stopped VM.
2026-03-01 19:39:15 (599586): Deregistering VM. (boinc_323ed5bf89c96452, slot#17)
2026-03-01 19:39:15 (599586): Removing network bandwidth throttle group from VM.
2026-03-01 19:39:15 (599586): Removing VM from VirtualBox.
2026-03-01 19:39:20 (599586): called boinc_finish(0)

</stderr_txt>
]]>

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