Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
22:45:41 (1940299): wrapper (7.7.26015): starting
22:45:41 (1940299): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 22:45:41] Arguments: --nthreads 4
[2026-02-28 22:45:41] Threads: 4
[2026-02-28 22:45:41] Checking for CVMFS
[2026-02-28 22:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 22:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 22:45:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 22:45:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 22:45:42] 2.13.3.0 1492169 904 50344 156755 1 188 2572056 4096001 2704 130560 0 1001886 99.990 32352 1217 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-02-28 22:45:42] CVMFS is ok
[2026-02-28 22:45:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 22:45:42] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-28 22:45:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-28 22:45:42] Further information can be found at the LHC@home message board.
[2026-02-28 22:45:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 22:45:42] Checking for apptainer binary...
[2026-02-28 22:45:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 22:45:42] Running /usr/bin/apptainer --version
[2026-02-28 22:45:42] apptainer version 1.4.5
[2026-02-28 22:45:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 22:45:42] ASRock-B760M
[2026-02-28 22:45:42] apptainer works
[2026-02-28 22:45:42] Set ATHENA_PROC_NUMBER=4
[2026-02-28 22:45:42] Set ATHENA_CORE_NUMBER=4
[2026-02-28 22:45:42] Starting ATLAS job with PandaID=7033906765
[2026-02-28 22:45:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 01:06:14]  *** The last 200 lines of the pilot log: ***
[2026-03-01 01:06:14] 2026-03-01 06:05:24,935 | INFO     | job 7033906765 has state=finished
[2026-03-01 01:06:14] 2026-03-01 06:05:24,935 | INFO     | preparing for final server update for job 7033906765 in state='finished'
[2026-03-01 01:06:14] 2026-03-01 06:05:24,935 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7033906765/jobReport.json
[2026-03-01 01:06:14] 2026-03-01 06:05:24,937 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/5/workernode_map.json
[2026-03-01 01:06:14] 2026-03-01 06:05:24,938 | INFO     | this job has now completed (state=finished)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,938 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,938 | INFO     | log transfer has been attempted: DONE
[2026-03-01 01:06:14] 2026-03-01 06:05:24,938 | INFO     | job 7033906765 has finished - writing final server update
[2026-03-01 01:06:14] 2026-03-01 06:05:24,938 | INFO     | total number of processed events: 400 (read)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,942 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/5/PanDA_Pilot-7033906765/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,942 | INFO     | extracted standard info from prmon json
[2026-03-01 01:06:14] 2026-03-01 06:05:24,942 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 01:06:14] 2026-03-01 06:05:24,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 01:06:14] 2026-03-01 06:05:24,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 01:06:14] 2026-03-01 06:05:24,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 01:06:14] 2026-03-01 06:05:24,945 | INFO     | fitting pss+swap vs Time
[2026-03-01 01:06:14] 2026-03-01 06:05:24,945 | INFO     | sum of square deviations: 797291228.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,945 | INFO     | sum of deviations: -1056562517.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | mean x: 1772340924.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | mean y: 2355602.8394160583
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | intersect: 2351044415.5094404
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | chi2: 1.3899382910179343
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | sum of square deviations: 713140813.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | sum of deviations: -871010429.5000005
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | mean x: 1772340771.5
[2026-03-01 01:06:14] 2026-03-01 06:05:24,946 | INFO     | mean y: 2355940.9318181816
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | intersect: 2167043851.7393813
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | chi2: 1.3902266933767973
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | current chi2=1.3902266933767973 (change=-0.020749292305037956 %)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | right removable region: 131
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | sum of square deviations: 713140813.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | sum of deviations: -16457055799.999998
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | mean x: 1772341076.5
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | mean y: 2382857.3636363638
[2026-03-01 01:06:14] 2026-03-01 06:05:24,947 | INFO     | intersect: 40902462422.144585
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | chi2: 0.07223988677790122
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | current chi2=0.07223988677790122 (change=94.80265510744397 %)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | sum of square deviations: 635130048.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | sum of deviations: -14111596649.999998
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | mean x: 1772341229.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | mean y: 2378263.622047244
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | intersect: 39381029342.35873
[2026-03-01 01:06:14] 2026-03-01 06:05:24,948 | INFO     | chi2: 0.07145081452845661
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | current chi2=0.07145081452845661 (change=1.0922944160621102 %)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | left removable region: 20
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | sum of square deviations: 424045160.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | sum of deviations: -7802802861.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | mean x: 1772341351.0
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | mean y: 2366220.972972973
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | intersect: 32615001545.595955
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | chi2: 0.05720728404205166
[2026-03-01 01:06:14] 2026-03-01 06:05:24,949 | INFO     | current memory leak: -18.40 B/s (using 111 data points, chi2=0.06)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | could have reported an average CPU frequency of 3072 MHz (8 samples)
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | ..............................
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . Timing measurements:
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . get job = 0 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . initial setup = 6 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . payload setup = 5 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . stage-in = 0 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . payload execution = 8347 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,950 | INFO     | . stage-out = 0 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,951 | INFO     | . log creation = 0 s
[2026-03-01 01:06:14] 2026-03-01 06:05:24,951 | INFO     | ..............................
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | 
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | job summary report
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | --------------------------------------------------
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | PanDA job id: 7033906765
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | task id: 48838536
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | errors: (none)
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | pilot state: finished 
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | transexitcode: 0
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | exeerrorcode: 0
[2026-03-01 01:06:14] 2026-03-01 06:05:25,008 | INFO     | exeerrordiag: 
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | exitcode: 0
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | exitmsg: OK
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | cpuconsumptiontime: 32660 s
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | nevents: 400
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | neventsw: 0
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | pid: 1948771
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | pgrp: 1948771
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | corecount: 4
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | event service: False
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | sizes: {0: 2281866, 1: 2282327, 11: 2282327, 8356: 2310309, 8357: 2319335, 8358: 2319391, 8359: 2319713}
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | --------------------------------------------------
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | 
[2026-03-01 01:06:14] 2026-03-01 06:05:25,009 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-01 01:06:14] 2026-03-01 06:05:25,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | job 7033906765 has completed (purged errors)
[2026-03-01 01:06:14] 2026-03-01 06:05:25,032 | INFO     | overall cleanup function is called
[2026-03-01 01:06:14] 2026-03-01 06:05:26,039 | INFO     | --- collectZombieJob: --- 10, [1948771]
[2026-03-01 01:06:14] 2026-03-01 06:05:26,040 | INFO     | zombie collector waiting for pid 1948771
[2026-03-01 01:06:14] 2026-03-01 06:05:26,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 01:06:14] 2026-03-01 06:05:26,040 | INFO     | collected zombie processes
[2026-03-01 01:06:14] 2026-03-01 06:05:26,040 | INFO     | will attempt to kill all subprocesses of pid=1948771
[2026-03-01 01:06:14] 2026-03-01 06:05:26,163 | INFO     | process IDs to be killed: [1948771] (in reverse order)
[2026-03-01 01:06:14] 2026-03-01 06:05:26,216 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 01:06:14] 2026-03-01 06:05:26,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 01:06:14] 2026-03-01 06:05:26,222 | INFO     | did not find any defunct processes belonging to 1948771
[2026-03-01 01:06:14] 2026-03-01 06:05:26,227 | INFO     | did not find any defunct processes belonging to 1948771
[2026-03-01 01:06:14] 2026-03-01 06:05:26,227 | INFO     | ready for new job
[2026-03-01 01:06:14] 2026-03-01 06:05:26,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 01:06:14] 2026-03-01 06:05:26,229 | INFO     | **************************************
[2026-03-01 01:06:14] 2026-03-01 06:05:26,230 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 01:06:14] 2026-03-01 06:05:26,230 | INFO     | **************************************
[2026-03-01 01:06:14] 2026-03-01 06:05:26,230 | INFO     | 
[2026-03-01 01:06:14] 2026-03-01 06:05:26,231 | INFO     | architecture information:
[2026-03-01 01:06:14] 2026-03-01 06:05:26,231 | INFO     | executing command: cat /etc/os-release
[2026-03-01 01:06:14] 2026-03-01 06:05:26,247 | INFO     | cat /etc/os-release:
[2026-03-01 01:06:14] NAME="CentOS Linux"
[2026-03-01 01:06:14] VERSION="7 (Core)"
[2026-03-01 01:06:14] ID="centos"
[2026-03-01 01:06:14] ID_LIKE="rhel fedora"
[2026-03-01 01:06:14] VERSION_ID="7"
[2026-03-01 01:06:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 01:06:14] ANSI_COLOR="0;31"
[2026-03-01 01:06:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 01:06:14] HOME_URL="https://www.centos.org/"
[2026-03-01 01:06:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 01:06:14] 
[2026-03-01 01:06:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 01:06:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 01:06:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 01:06:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 01:06:14] 
[2026-03-01 01:06:14] 2026-03-01 06:05:26,247 | INFO     | **************************************
[2026-03-01 01:06:14] 2026-03-01 06:05:26,750 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/5
[2026-03-01 01:06:14] 2026-03-01 06:05:26,768 | INFO     | sufficient remaining disk space (421777113088 B)
[2026-03-01 01:06:14] 2026-03-01 06:05:26,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 01:06:14] 2026-03-01 06:05:26,769 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 01:06:14] 2026-03-01 06:05:26,769 | INFO     | update_server=False
[2026-03-01 01:06:14] 2026-03-01 06:05:26,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 01:06:14] 2026-03-01 06:05:26,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 01:06:14] 2026-03-01 06:05:26,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 01:06:14] 2026-03-01 06:05:26,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 01:06:14] 2026-03-01 06:05:26,798 | INFO     | all payload control threads have been joined
[2026-03-01 01:06:14] 2026-03-01 06:05:26,799 | INFO     | all data control threads have been joined
[2026-03-01 01:06:14] 2026-03-01 06:05:27,178 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 01:06:14] 2026-03-01 06:05:27,179 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 01:06:14] 2026-03-01 06:05:27,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 01:06:14] 2026-03-01 06:05:27,179 | INFO     | will abort loop
[2026-03-01 01:06:14] 2026-03-01 06:05:27,775 | INFO     | [job] retrieve thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:27,776 | INFO     | [job] queue monitor thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:27,804 | INFO     | [data] control thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:27,805 | INFO     | [payload] control thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:27,824 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,175 | INFO     | [payload] validate_post thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,184 | INFO     | [job] job monitor thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,399 | INFO     | all job control threads have been joined
[2026-03-01 01:06:14] 2026-03-01 06:05:28,776 | INFO     | [data] copytool_out thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,897 | INFO     | [payload] failed_post thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,931 | INFO     | [job] validate thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:28,990 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:29,046 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:29,191 | INFO     | [data] copytool_in thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:29,404 | INFO     | [job] control thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:30,777 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 01:06:14] 2026-03-01 06:05:57,372 | INFO     | PID=1944163 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 01:06:14] 2026-03-01 06:05:57,373 | INFO     | .. there are 3 such processes running
[2026-03-01 01:06:14] 2026-03-01 06:05:57,374 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 01:06:14] 2026-03-01 06:05:57,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 01:06:14] 2026-03-01 06:05:57,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 01:06:14] 2026-03-01 06:06:08,488 | INFO     | [monitor] cgroup control has ended
[2026-03-01 01:06:14] 2026-03-01 06:06:09,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135786326726464)>', '<ExcThread(monitor, started 135785810466560)>']
[2026-03-01 01:06:14] 2026-03-01 06:06:09,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 01:06:14] 2026-03-01 06:06:09,434 | INFO     | [monitor] control thread has ended
[2026-03-01 01:06:14] 2026-03-01 06:06:14,083 | INFO     | all workflow threads have been joined
[2026-03-01 01:06:14] 2026-03-01 06:06:14,084 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 01:06:14] 2026-03-01 06:06:14,084 | INFO     | traces error code: 0
[2026-03-01 01:06:14] 2026-03-01 06:06:14,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 01:06:14] 2026-03-01 06:06:14,235 [wrapper] ==== pilot stdout END ====
[2026-03-01 01:06:14] 2026-03-01 06:06:14,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 01:06:14] 2026-03-01 06:06:14,245 [wrapper] pilotpid: 1944163
[2026-03-01 01:06:14] 2026-03-01 06:06:14,249 [wrapper] Pilot exit status: 0
[2026-03-01 01:06:14] 2026-03-01 06:06:14,262 [wrapper] pandaids: 7033906765
[2026-03-01 01:06:14] 2026-03-01 06:06:14,301 [wrapper] cleanup supervisor_pilot 1984073 1944164
[2026-03-01 01:06:14] 2026-03-01 06:06:14,305 [wrapper] Test setup, not cleaning
[2026-03-01 01:06:14] 2026-03-01 06:06:14,311 [wrapper] apfmon messages muted
[2026-03-01 01:06:14] 2026-03-01 06:06:14,315 [wrapper] ==== wrapper stdout END ====
[2026-03-01 01:06:14] 2026-03-01 06:06:14,317 [wrapper] ==== wrapper stderr END ====
[2026-03-01 01:06:14]  *** Error codes and diagnostics ***
[2026-03-01 01:06:14]     "exeErrorCode": 0,
[2026-03-01 01:06:14]     "exeErrorDiag": "",
[2026-03-01 01:06:14]     "pilotErrorCode": 0,
[2026-03-01 01:06:14]     "pilotErrorDiag": "",
[2026-03-01 01:06:14]  *** Listing of results directory ***
[2026-03-01 01:06:14] total 465688
[2026-03-01 01:06:14] -rw-r--r-- 1 whitlerd whitlerd    584627 Feb 28 17:55 pilot3.tar.gz
[2026-03-01 01:06:14] -rw-r--r-- 1 whitlerd whitlerd      5111 Feb 28 17:56 queuedata.json
[2026-03-01 01:06:14] -rwx------ 1 whitlerd whitlerd     36322 Feb 28 17:56 runpilot2-wrapper.sh
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd       100 Feb 28 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 01:06:14] -rwxr-xr-x 1 whitlerd whitlerd      7986 Feb 28 22:45 run_atlas
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd       105 Feb 28 22:45 job.xml
[2026-03-01 01:06:14] -rw-r--r-- 2 whitlerd whitlerd 270000515 Feb 28 22:45 EVNT.48343704._000075.pool.root.1
[2026-03-01 01:06:14] -rw-r--r-- 2 whitlerd whitlerd    597965 Feb 28 22:45 input.tar.gz
[2026-03-01 01:06:14] -rw-r--r-- 2 whitlerd whitlerd     15845 Feb 28 22:45 start_atlas.sh
[2026-03-01 01:06:14] drwxrwx--x 2 whitlerd whitlerd      4096 Feb 28 22:45 shared
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd         0 Feb 28 22:45 boinc_setup_complete
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd      9182 Feb 28 22:45 init_data.xml
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd         0 Feb 28 22:45 boinc_lockfile
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd      2574 Feb 28 22:45 pandaJob.out
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd    998790 Feb 28 22:45 agis_schedconf.cvmfs.json
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd   1513015 Feb 28 22:45 agis_ddmendpoints.agis.ALL.json
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd       420 Feb 28 22:45 workernode_map.json
[2026-03-01 01:06:14] drwx------ 5 whitlerd whitlerd      4096 Feb 28 22:45 pilot3
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd 199829428 Mar  1 01:04 HITS.48838536._001869.pool.root.1
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd      1017 Mar  1 01:05 memory_monitor_summary.json
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar  1 01:05 boinc_task_state.xml
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd    308662 Mar  1 01:05 log.48838536._001869.job.log.tgz.1
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd      6293 Mar  1 01:05 heartbeat.json
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  1 01:05 boinc_mmap_file
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  1 01:05 wrapper_checkpoint.txt
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd        95 Mar  1 01:05 pilot_heartbeat.json
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd      5020 Mar  1 01:06 pilotlog.txt
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd   1237791 Mar  1 01:06 log.48838536._001869.job.log.1
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd       357 Mar  1 01:06 output.list
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  1 01:06 runtime_log
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd   1566720 Mar  1 01:06 result.tar.gz
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd      9019 Mar  1 01:06 runtime_log.err
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd       651 Mar  1 01:06 aVIODmoPiG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5T6KDmoPuPUo.diag
[2026-03-01 01:06:14] -rw-rw-r-- 1 whitlerd whitlerd     21386 Mar  1 01:06 stderr.txt
[2026-03-01 01:06:14] HITS file was successfully produced:
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd 199829428 Mar  1 01:04 shared/HITS.pool.root.1
[2026-03-01 01:06:14]  *** Contents of shared directory: ***
[2026-03-01 01:06:14] total 460964
[2026-03-01 01:06:14] -rw-r--r-- 2 whitlerd whitlerd 270000515 Feb 28 22:45 ATLAS.root_0
[2026-03-01 01:06:14] -rw-r--r-- 2 whitlerd whitlerd    597965 Feb 28 22:45 input.tar.gz
[2026-03-01 01:06:14] -rw-r--r-- 2 whitlerd whitlerd     15845 Feb 28 22:45 start_atlas.sh
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd 199829428 Mar  1 01:04 HITS.pool.root.1
[2026-03-01 01:06:14] -rw------- 1 whitlerd whitlerd   1566720 Mar  1 01:06 result.tar.gz
01:06:15 (1940299): run_atlas exited; CPU time 32743.726142
01:06:15 (1940299): called boinc_finish(0)

</stderr_txt>
]]>

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