Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:14:46 (966807): wrapper (7.7.26015): starting
12:14:46 (966807): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 12:14:46] Arguments: --nthreads 12
[2026-03-01 12:14:46] Threads: 12
[2026-03-01 12:14:46] Checking for CVMFS
[2026-03-01 12:14:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 12:14:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 12:14:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 12:14:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 12:14:49] 2.13.3.0 8767 27487 223788 156768 2 25 38649188 46080000 22938 130560 0 96825253 99.790 57549701 26694 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-01 12:14:49] CVMFS is ok
[2026-03-01 12:14:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 12:14:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 12:14:49] Further information can be found at the LHC@home message board.
[2026-03-01 12:14:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 12:14:49] Checking for apptainer binary...
[2026-03-01 12:14:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 12:14:49] Running /usr/bin/apptainer --version
[2026-03-01 12:14:49] apptainer version 1.4.5-2.el9
[2026-03-01 12:14:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 12:14:50] mff2102.farm.particle.cz
[2026-03-01 12:14:50] apptainer works
[2026-03-01 12:14:50] Set ATHENA_PROC_NUMBER=12
[2026-03-01 12:14:50] Set ATHENA_CORE_NUMBER=12
[2026-03-01 12:18:03] Starting ATLAS job with PandaID=7033996678
[2026-03-01 12:18:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 13:56:13]  *** The last 200 lines of the pilot log: ***
[2026-03-01 13:56:13]  lfn=log.48838581._002945.job.log.tgz.1
[2026-03-01 13:56:13]  mtime=0
[2026-03-01 13:56:13]  protocol_id=None
[2026-03-01 13:56:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 13:56:13]  replicas=None
[2026-03-01 13:56:13]  scope=mc23_13p6TeV
[2026-03-01 13:56:13]  status=None
[2026-03-01 13:56:13]  status_code=0
[2026-03-01 13:56:13]  storage_token=
[2026-03-01 13:56:13]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-7033996678/log.48838581._002945.job.log.tgz.1
[2026-03-01 13:56:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/03/log.48838581._002945.job.log.tgz.1
[2026-03-01 13:56:13]  workdir=None
[2026-03-01 13:56:13] ]
[2026-03-01 13:56:13] 2026-03-01 12:55:11,238 | INFO     | transferring file log.48838581._002945.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-7033996678/log.48838581._002945.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-01 13:56:13] 2026-03-01 12:55:11,238 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-7033996678/log.48838581._002945.job.log.tgz.1 /scratch/.boinc/slots/5/log.48838581._002945.j
[2026-03-01 13:56:13] 2026-03-01 12:55:11,441 | INFO     | adding to output.list: log.48838581._002945.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/03/log.48838581._002945.job.log.tg
[2026-03-01 13:56:13] 2026-03-01 12:55:11,442 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 13:56:13] 2026-03-01 12:55:11,442 | INFO     | summary of transferred files:
[2026-03-01 13:56:13] 2026-03-01 12:55:11,442 | INFO     |  -- lfn=log.48838581._002945.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 13:56:13] 2026-03-01 12:55:11,442 | INFO     | stage-out finished correctly
[2026-03-01 13:56:13] 2026-03-01 12:55:11,750 | INFO     | monitor loop #403: job 0:7033996678 is in state 'finished'
[2026-03-01 13:56:13] 2026-03-01 12:55:11,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 13:56:13] 2026-03-01 12:55:12,832 | INFO     | PID=974429 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 13:56:13] 2026-03-01 12:55:12,832 | INFO     | .. there are 38 such processes running
[2026-03-01 13:56:13] 2026-03-01 12:55:13,834 | INFO     | time since job start (5687s) is within the limit (349056.0s)
[2026-03-01 13:56:13] 2026-03-01 12:55:13,993 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 13:56:13] 2026-03-01 12:55:14,259 | INFO     | monitor loop #404: job 0:7033996678 is in state 'finished'
[2026-03-01 13:56:13] 2026-03-01 12:55:14,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 13:56:13] 2026-03-01 12:55:14,962 | INFO     | job 7033996678 has state=finished
[2026-03-01 13:56:13] 2026-03-01 12:55:14,963 | INFO     | preparing for final server update for job 7033996678 in state='finished'
[2026-03-01 13:56:13] 2026-03-01 12:55:14,963 | INFO     | reading metadata from: /scratch/.boinc/slots/5/PanDA_Pilot-7033996678/jobReport.json
[2026-03-01 13:56:13] 2026-03-01 12:55:14,965 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/5/workernode_map.json
[2026-03-01 13:56:13] 2026-03-01 12:55:14,966 | INFO     | this job has now completed (state=finished)
[2026-03-01 13:56:13] 2026-03-01 12:55:14,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 13:56:13] 2026-03-01 12:55:14,966 | INFO     | log transfer has been attempted: DONE
[2026-03-01 13:56:13] 2026-03-01 12:55:14,966 | INFO     | job 7033996678 has finished - writing final server update
[2026-03-01 13:56:13] 2026-03-01 12:55:14,970 | INFO     | total number of processed events: 400 (read)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,007 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-7033996678/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,008 | INFO     | extracted standard info from prmon json
[2026-03-01 13:56:13] 2026-03-01 12:55:15,012 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 13:56:13] 2026-03-01 12:55:15,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 13:56:13] 2026-03-01 12:55:15,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 13:56:13] 2026-03-01 12:55:15,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 13:56:13] 2026-03-01 12:55:15,015 | INFO     | fitting pss+swap vs Time
[2026-03-01 13:56:13] 2026-03-01 12:55:15,015 | INFO     | sum of square deviations: 190403570.0
[2026-03-01 13:56:13] 2026-03-01 12:55:15,016 | INFO     | sum of deviations: 4999443673.000001
[2026-03-01 13:56:13] 2026-03-01 12:55:15,016 | INFO     | mean x: 1772367001.0
[2026-03-01 13:56:13] 2026-03-01 12:55:15,016 | INFO     | mean y: 2725032.411764706
[2026-03-01 13:56:13] 2026-03-01 12:55:15,016 | INFO     | intersect: -46534474818.323364
[2026-03-01 13:56:13] 2026-03-01 12:55:15,020 | INFO     | chi2: 0.34478914436678587
[2026-03-01 13:56:13] 2026-03-01 12:55:15,020 | INFO     | current memory leak: 26.26 B/s (using 85 data points, chi2=0.34)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | could have reported an average CPU frequency of 2757 MHz (7 samples)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | ..............................
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . Timing measurements:
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . get job = 0 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . initial setup = 48 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . payload setup = 63 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . stage-in = 0 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . payload execution = 5612 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,021 | INFO     | . stage-out = 1 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,022 | INFO     | . log creation = 0 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,022 | INFO     | ..............................
[2026-03-01 13:56:13] 2026-03-01 12:55:15,237 | INFO     | 
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | job summary report
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | --------------------------------------------------
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | PanDA job id: 7033996678
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | task id: 48838581
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | errors: (none)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | pilot state: finished 
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | transexitcode: 0
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | exeerrorcode: 0
[2026-03-01 13:56:13] 2026-03-01 12:55:15,238 | INFO     | exeerrordiag: 
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | exitcode: 0
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | exitmsg: OK
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | cpuconsumptiontime: 44973 s
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | nevents: 400
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | neventsw: 0
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | pid: 982492
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | pgrp: 982492
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | corecount: 12
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | event service: False
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | sizes: {0: 2281210, 1: 2281896, 2: 2282357, 3: 2282357, 5679: 2309043, 5683: 2318043, 5685: 2318227, 5686: 2318421}
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | --------------------------------------------------
[2026-03-01 13:56:13] 2026-03-01 12:55:15,239 | INFO     | 
[2026-03-01 13:56:13] 2026-03-01 12:55:15,240 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-03-01 13:56:13] 2026-03-01 12:55:15,485 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | job 7033996678 has completed (purged errors)
[2026-03-01 13:56:13] 2026-03-01 12:55:15,492 | INFO     | overall cleanup function is called
[2026-03-01 13:56:13] 2026-03-01 12:55:16,507 | INFO     | --- collectZombieJob: --- 10, [982492]
[2026-03-01 13:56:13] 2026-03-01 12:55:16,508 | INFO     | zombie collector waiting for pid 982492
[2026-03-01 13:56:13] 2026-03-01 12:55:16,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 13:56:13] 2026-03-01 12:55:16,508 | INFO     | collected zombie processes
[2026-03-01 13:56:13] 2026-03-01 12:55:16,508 | INFO     | will attempt to kill all subprocesses of pid=982492
[2026-03-01 13:56:13] 2026-03-01 12:55:17,368 | INFO     | process IDs to be killed: [982492] (in reverse order)
[2026-03-01 13:56:13] 2026-03-01 12:55:18,010 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 13:56:13] 2026-03-01 12:55:18,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 13:56:13] 2026-03-01 12:55:18,050 | INFO     | did not find any defunct processes belonging to 982492
[2026-03-01 13:56:13] 2026-03-01 12:55:18,088 | INFO     | did not find any defunct processes belonging to 982492
[2026-03-01 13:56:13] 2026-03-01 12:55:18,088 | INFO     | ready for new job
[2026-03-01 13:56:13] 2026-03-01 12:55:18,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 13:56:13] 2026-03-01 12:55:18,091 | INFO     | **************************************
[2026-03-01 13:56:13] 2026-03-01 12:55:18,091 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 13:56:13] 2026-03-01 12:55:18,091 | INFO     | **************************************
[2026-03-01 13:56:13] 2026-03-01 12:55:18,091 | INFO     | 
[2026-03-01 13:56:13] 2026-03-01 12:55:18,102 | INFO     | architecture information:
[2026-03-01 13:56:13] 2026-03-01 12:55:18,106 | INFO     | executing command: cat /etc/os-release
[2026-03-01 13:56:13] 2026-03-01 12:55:18,252 | INFO     | cat /etc/os-release:
[2026-03-01 13:56:13] NAME="CentOS Linux"
[2026-03-01 13:56:13] VERSION="7 (Core)"
[2026-03-01 13:56:13] ID="centos"
[2026-03-01 13:56:13] ID_LIKE="rhel fedora"
[2026-03-01 13:56:13] VERSION_ID="7"
[2026-03-01 13:56:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 13:56:13] ANSI_COLOR="0;31"
[2026-03-01 13:56:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 13:56:13] HOME_URL="https://www.centos.org/"
[2026-03-01 13:56:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 13:56:13] 
[2026-03-01 13:56:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 13:56:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 13:56:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 13:56:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 13:56:13] 
[2026-03-01 13:56:13] 2026-03-01 12:55:18,252 | INFO     | **************************************
[2026-03-01 13:56:13] 2026-03-01 12:55:18,756 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-03-01 13:56:13] 2026-03-01 12:55:18,908 | INFO     | sufficient remaining disk space (1536346292224 B)
[2026-03-01 13:56:13] 2026-03-01 12:55:18,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 13:56:13] 2026-03-01 12:55:18,909 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 13:56:13] 2026-03-01 12:55:18,909 | INFO     | update_server=False
[2026-03-01 13:56:13] 2026-03-01 12:55:18,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 13:56:13] 2026-03-01 12:55:18,936 | INFO     | all job control threads have been joined
[2026-03-01 13:56:13] 2026-03-01 12:55:19,275 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 13:56:13] 2026-03-01 12:55:19,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 13:56:13] 2026-03-01 12:55:19,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 13:56:13] 2026-03-01 12:55:19,276 | INFO     | will abort loop
[2026-03-01 13:56:13] 2026-03-01 12:55:19,632 | INFO     | all data control threads have been joined
[2026-03-01 13:56:13] 2026-03-01 12:55:19,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 13:56:13] 2026-03-01 12:55:19,916 | INFO     | [job] retrieve thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:19,942 | INFO     | [job] control thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 13:56:13] 2026-03-01 12:55:20,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 13:56:13] 2026-03-01 12:55:20,281 | INFO     | [job] job monitor thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,336 | INFO     | [payload] validate_post thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,366 | INFO     | [payload] failed_post thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,407 | INFO     | all payload control threads have been joined
[2026-03-01 13:56:13] 2026-03-01 12:55:20,636 | INFO     | [job] validate thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,638 | INFO     | [data] control thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,645 | INFO     | [data] copytool_in thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,774 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:20,965 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:21,274 | INFO     | [job] queue monitor thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:21,276 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:21,417 | INFO     | [payload] control thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:21,669 | INFO     | [data] copytool_out thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:24,130 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:29,830 | INFO     | job.realtimelogging is not enabled
[2026-03-01 13:56:13] 2026-03-01 12:55:30,836 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 13:56:13] 2026-03-01 12:55:34,724 | INFO     | [monitor] cgroup control has ended
[2026-03-01 13:56:13] 2026-03-01 12:55:36,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187421230912)>', '<ExcThread(monitor, started 140187061450496)>']
[2026-03-01 13:56:13] 2026-03-01 12:55:41,317 | INFO     | all workflow threads have been joined
[2026-03-01 13:56:13] 2026-03-01 12:55:41,318 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 13:56:13] 2026-03-01 12:55:41,318 | INFO     | traces error code: 0
[2026-03-01 13:56:13] 2026-03-01 12:55:41,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 13:56:13] 2026-03-01 12:55:47,809 | INFO     | PID=974429 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 13:56:13] 2026-03-01 12:55:47,810 | INFO     | .. there are 38 such processes running
[2026-03-01 13:56:13] 2026-03-01 12:55:47,811 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 13:56:13] 2026-03-01 12:55:47,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 13:56:13] 2026-03-01 12:55:47,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 13:56:13] 2026-03-01 12:55:47,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 13:56:13] 2026-03-01 12:55:47,812 | INFO     | [monitor] control thread has ended
[2026-03-01 13:56:13] 2026-03-01 12:55:48,191 [wrapper] ==== pilot stdout END ====
[2026-03-01 13:56:13] 2026-03-01 12:55:48,223 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 13:56:13] 2026-03-01 12:55:48,248 [wrapper] pilotpid: 974429
[2026-03-01 13:56:13] 2026-03-01 12:55:48,291 [wrapper] Pilot exit status: 0
[2026-03-01 13:56:13] 2026-03-01 12:55:48,410 [wrapper] pandaids: 7033996678
[2026-03-01 13:56:13] 2026-03-01 12:55:48,548 [wrapper] cleanup supervisor_pilot 1130141 974430
[2026-03-01 13:56:13] 2026-03-01 12:55:48,579 [wrapper] Test setup, not cleaning
[2026-03-01 13:56:13] 2026-03-01 12:55:48,631 [wrapper] apfmon messages muted
[2026-03-01 13:56:13] 2026-03-01 12:55:48,648 [wrapper] ==== wrapper stdout END ====
[2026-03-01 13:56:13] 2026-03-01 12:55:48,665 [wrapper] ==== wrapper stderr END ====
[2026-03-01 13:56:13]  *** Error codes and diagnostics ***
[2026-03-01 13:56:13]     "exeErrorCode": 0,
[2026-03-01 13:56:13]     "exeErrorDiag": "",
[2026-03-01 13:56:13]     "pilotErrorCode": 0,
[2026-03-01 13:56:13]     "pilotErrorDiag": "",
[2026-03-01 13:56:13]  *** Listing of results directory ***
[2026-03-01 13:56:13] total 505064
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc    584627 Feb 28 23:55 pilot3.tar.gz
[2026-03-01 13:56:13] -rwx------ 1 boinc boinc     36322 Feb 28 23:58 runpilot2-wrapper.sh
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc      5111 Mar  1 00:01 queuedata.json
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc       100 Mar  1 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 13:56:13] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 12:14 run_atlas
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc       105 Mar  1 12:14 job.xml
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc      6676 Mar  1 12:14 init_data.xml
[2026-03-01 13:56:13] -rw-r--r-- 2 boinc boinc 285529048 Mar  1 12:14 EVNT.48220205._000128.pool.root.1
[2026-03-01 13:56:13] -rw-r--r-- 2 boinc boinc     15845 Mar  1 12:14 start_atlas.sh
[2026-03-01 13:56:13] drwxrwx--x 2 boinc boinc      4096 Mar  1 12:14 shared
[2026-03-01 13:56:13] -rw-r--r-- 2 boinc boinc    597973 Mar  1 12:14 input.tar.gz
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc         0 Mar  1 12:14 boinc_lockfile
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc      2588 Mar  1 12:14 pandaJob.out
[2026-03-01 13:56:13] -rw------- 1 boinc boinc    998184 Mar  1 12:19 agis_schedconf.cvmfs.json
[2026-03-01 13:56:13] -rw------- 1 boinc boinc   1513015 Mar  1 12:19 agis_ddmendpoints.agis.ALL.json
[2026-03-01 13:56:13] -rw------- 1 boinc boinc       436 Mar  1 12:20 workernode_map.json
[2026-03-01 13:56:13] drwx------ 5 boinc boinc      4096 Mar  1 12:20 pilot3
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc       528 Mar  1 13:54 boinc_task_state.xml
[2026-03-01 13:56:13] -rw------- 1 boinc boinc 225346024 Mar  1 13:54 HITS.48838581._002945.pool.root.1
[2026-03-01 13:56:13] -rw------- 1 boinc boinc      1023 Mar  1 13:55 memory_monitor_summary.json
[2026-03-01 13:56:13] -rw------- 1 boinc boinc    395397 Mar  1 13:55 log.48838581._002945.job.log.tgz.1
[2026-03-01 13:56:13] -rw------- 1 boinc boinc        95 Mar  1 13:55 pilot_heartbeat.json
[2026-03-01 13:56:13] -rw------- 1 boinc boinc      6342 Mar  1 13:55 heartbeat.json
[2026-03-01 13:56:13] -rw------- 1 boinc boinc       822 Mar  1 13:55 pilotlog.txt
[2026-03-01 13:56:13] -rw------- 1 boinc boinc    798325 Mar  1 13:55 log.48838581._002945.job.log.1
[2026-03-01 13:56:13] -rw------- 1 boinc boinc       357 Mar  1 13:55 output.list
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc       620 Mar  1 13:55 runtime_log
[2026-03-01 13:56:13] -rw------- 1 boinc boinc   1208320 Mar  1 13:55 result.tar.gz
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc      8879 Mar  1 13:55 runtime_log.err
[2026-03-01 13:56:13] -rw------- 1 boinc boinc       663 Mar  1 13:55 NkfLDmdRiG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJb6KDmtaYYen.diag
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc        26 Mar  1 13:56 wrapper_checkpoint.txt
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc      8192 Mar  1 13:56 boinc_mmap_file
[2026-03-01 13:56:13] -rw-r--r-- 1 boinc boinc     21742 Mar  1 13:56 stderr.txt
[2026-03-01 13:56:13] HITS file was successfully produced:
[2026-03-01 13:56:13] -rw------- 1 boinc boinc 225346024 Mar  1 13:54 shared/HITS.pool.root.1
[2026-03-01 13:56:13]  *** Contents of shared directory: ***
[2026-03-01 13:56:13] total 500696
[2026-03-01 13:56:13] -rw-r--r-- 2 boinc boinc 285529048 Mar  1 12:14 ATLAS.root_0
[2026-03-01 13:56:13] -rw-r--r-- 2 boinc boinc     15845 Mar  1 12:14 start_atlas.sh
[2026-03-01 13:56:13] -rw-r--r-- 2 boinc boinc    597973 Mar  1 12:14 input.tar.gz
[2026-03-01 13:56:13] -rw------- 1 boinc boinc 225346024 Mar  1 13:54 HITS.pool.root.1
[2026-03-01 13:56:13] -rw------- 1 boinc boinc   1208320 Mar  1 13:55 result.tar.gz
13:56:15 (966807): run_atlas exited; CPU time 45207.271065
13:56:15 (966807): called boinc_finish(0)

</stderr_txt>
]]>

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