Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:29:29 (438016): wrapper (7.7.26015): starting
03:29:29 (438016): wrapper: running run_atlas (--nthreads 3)
[2026-03-02 03:29:29] Arguments: --nthreads 3
[2026-03-02 03:29:29] Threads: 3
[2026-03-02 03:29:29] Checking for CVMFS
[2026-03-02 03:29:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 03:29:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 03:29:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 03:29:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 03:29:31] 2.9.2.0 408893 199 53128 156791 0 50 24012301 36864000 0 130560 0 80403 99.976 8253 13225 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-02 03:29:31] CVMFS is ok
[2026-03-02 03:29:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 03:29:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 03:29:31] Further information can be found at the LHC@home message board.
[2026-03-02 03:29:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 03:29:31] Checking for apptainer binary...
[2026-03-02 03:29:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 03:29:31] Running /usr/bin/apptainer --version
[2026-03-02 03:29:31] apptainer version 1.4.1-1.1
[2026-03-02 03:29:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 03:29:31] atlasA215
[2026-03-02 03:29:31] apptainer works
[2026-03-02 03:29:31] Set ATHENA_PROC_NUMBER=3
[2026-03-02 03:29:31] Set ATHENA_CORE_NUMBER=3
[2026-03-02 03:29:31] Starting ATLAS job with PandaID=7033996869
[2026-03-02 03:29:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 05:06:54]  *** The last 200 lines of the pilot log: ***
[2026-03-02 05:06:54] ID="centos"
[2026-03-02 05:06:54] ID_LIKE="rhel fedora"
[2026-03-02 05:06:54] VERSION_ID="7"
[2026-03-02 05:06:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 05:06:54] ANSI_COLOR="0;31"
[2026-03-02 05:06:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 05:06:54] HOME_URL="https://www.centos.org/"
[2026-03-02 05:06:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 05:06:54] 
[2026-03-02 05:06:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 05:06:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 05:06:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 05:06:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 05:06:54] 
[2026-03-02 05:06:54] 2026-03-02 04:05:53,622 | INFO     | **************************************
[2026-03-02 05:06:54] 2026-03-02 04:05:54,125 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-02 05:06:54] 2026-03-02 04:05:54,140 | INFO     | sufficient remaining disk space (381337731072 B)
[2026-03-02 05:06:54] 2026-03-02 04:05:54,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 05:06:54] 2026-03-02 04:05:54,140 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 05:06:54] 2026-03-02 04:05:54,140 | INFO     | update_server=False
[2026-03-02 05:06:54] 2026-03-02 04:05:54,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 05:06:54] 2026-03-02 04:05:54,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 05:06:54] 2026-03-02 04:05:54,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 05:06:54] 2026-03-02 04:05:54,469 | INFO     | all job control threads have been joined
[2026-03-02 05:06:54] 2026-03-02 04:05:54,572 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 05:06:54] 2026-03-02 04:05:54,573 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 05:06:54] 2026-03-02 04:05:54,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 05:06:54] 2026-03-02 04:05:54,573 | INFO     | will abort loop
[2026-03-02 05:06:54] 2026-03-02 04:05:54,675 | INFO     | all data control threads have been joined
[2026-03-02 05:06:54] 2026-03-02 04:05:55,035 | INFO     | all payload control threads have been joined
[2026-03-02 05:06:54] 2026-03-02 04:05:55,146 | INFO     | [job] queue monitor thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:55,146 | INFO     | [job] retrieve thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:55,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 05:06:54] 2026-03-02 04:05:55,475 | INFO     | [job] control thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:55,578 | INFO     | [job] job monitor thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:55,607 | INFO     | [payload] failed_post thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:55,680 | INFO     | [data] control thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:55,723 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:56,041 | INFO     | [payload] control thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:56,157 | INFO     | [payload] validate_post thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:56,307 | INFO     | [job] validate thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:56,366 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:56,410 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:56,513 | INFO     | [data] copytool_in thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:57,220 | INFO     | [data] copytool_out thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:05:58,148 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:06:05,025 | INFO     | job.realtimelogging is not enabled
[2026-03-02 05:06:54] 2026-03-02 04:06:06,030 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 05:06:54] 2026-03-02 04:06:24,406 | INFO     | PID=442066 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 05:06:54] 2026-03-02 04:06:24,406 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 05:06:54] 2026-03-02 04:06:24,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 05:06:54] 2026-03-02 04:06:24,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 05:06:54] 2026-03-02 04:06:48,933 | INFO     | [monitor] cgroup control has ended
[2026-03-02 05:06:54] 2026-03-02 04:06:49,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476844758848)>', '<ExcThread(monitor, started 140476225152768)>']
[2026-03-02 05:06:54] 2026-03-02 04:06:50,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 05:06:54] 2026-03-02 04:06:50,535 | INFO     | [monitor] control thread has ended
[2026-03-02 05:06:54] 2026-03-02 04:06:54,858 | INFO     | all workflow threads have been joined
[2026-03-02 05:06:54] 2026-03-02 04:06:54,858 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 05:06:54] 2026-03-02 04:06:54,858 | INFO     | traces error code: 0
[2026-03-02 05:06:54] 2026-03-02 04:06:54,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 05:06:54] 2026-03-02 04:06:54,911 [wrapper] ==== pilot stdout END ====
[2026-03-02 05:06:54] 2026-03-02 04:06:54,914 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 05:06:54] 2026-03-02 04:06:54,916 [wrapper] pilotpid: 442066
[2026-03-02 05:06:54] 2026-03-02 04:06:54,919 [wrapper] Pilot exit status: 0
[2026-03-02 05:06:54] 2026-03-02 04:06:54,927 [wrapper] pandaids: 7033996869
[2026-03-02 05:06:54] 2026-03-02 04:06:54,947 [wrapper] cleanup supervisor_pilot  452247 442067
[2026-03-02 05:06:54] 2026-03-02 04:06:54,950 [wrapper] Test setup, not cleaning
[2026-03-02 05:06:54] 2026-03-02 04:06:54,952 [wrapper] apfmon messages muted
[2026-03-02 05:06:54] 2026-03-02 04:06:54,955 [wrapper] ==== wrapper stdout END ====
[2026-03-02 05:06:54] 2026-03-02 04:06:54,957 [wrapper] ==== wrapper stderr END ====
[2026-03-02 05:06:54]  *** Error codes and diagnostics ***
[2026-03-02 05:06:55]     "exeErrorCode": 0,
[2026-03-02 05:06:55]     "exeErrorDiag": "",
[2026-03-02 05:06:55]     "pilotErrorCode": 0,
[2026-03-02 05:06:55]     "pilotErrorDiag": "",
[2026-03-02 05:06:55]  *** Listing of results directory ***
[2026-03-02 05:06:55] total 501800
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc    584627 Feb 28 23:55 pilot3.tar.gz
[2026-03-02 05:06:55] -rwx------ 1 boinc boinc     36322 Feb 28 23:56 runpilot2-wrapper.sh
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc      5111 Feb 28 23:58 queuedata.json
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc       100 Mar  2 03:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 05:06:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 03:29 run_atlas
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc       105 Mar  2 03:29 job.xml
[2026-03-02 05:06:55] -rw-r--r-- 2 boinc boinc 284502087 Mar  2 03:29 EVNT.48220205._000136.pool.root.1
[2026-03-02 05:06:55] -rw-r--r-- 2 boinc boinc    597971 Mar  2 03:29 input.tar.gz
[2026-03-02 05:06:55] -rw-r--r-- 2 boinc boinc     15845 Mar  2 03:29 start_atlas.sh
[2026-03-02 05:06:55] drwxrwx--x 2 boinc boinc      4096 Mar  2 03:29 shared
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc         0 Mar  2 03:29 boinc_setup_complete
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc      6448 Mar  2 03:29 init_data.xml
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc         0 Mar  2 03:29 boinc_lockfile
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc      2585 Mar  2 03:29 pandaJob.out
[2026-03-02 05:06:55] -rw------- 1 boinc boinc    998242 Mar  2 03:29 agis_schedconf.cvmfs.json
[2026-03-02 05:06:55] -rw------- 1 boinc boinc   1513015 Mar  2 03:29 agis_ddmendpoints.agis.ALL.json
[2026-03-02 05:06:55] -rw------- 1 boinc boinc       426 Mar  2 03:29 workernode_map.json
[2026-03-02 05:06:55] drwx------ 5 boinc boinc      4096 Mar  2 03:29 pilot3
[2026-03-02 05:06:55] -rw------- 1 boinc boinc 223254865 Mar  2 05:05 HITS.48838581._003136.pool.root.1
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc       529 Mar  2 05:05 boinc_task_state.xml
[2026-03-02 05:06:55] -rw------- 1 boinc boinc      1016 Mar  2 05:05 memory_monitor_summary.json
[2026-03-02 05:06:55] -rw------- 1 boinc boinc    247896 Mar  2 05:05 log.48838581._003136.job.log.tgz.1
[2026-03-02 05:06:55] -rw------- 1 boinc boinc      6304 Mar  2 05:05 heartbeat.json
[2026-03-02 05:06:55] -rw------- 1 boinc boinc        95 Mar  2 05:06 pilot_heartbeat.json
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc        27 Mar  2 05:06 wrapper_checkpoint.txt
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc      8192 Mar  2 05:06 boinc_mmap_file
[2026-03-02 05:06:55] -rw------- 1 boinc boinc      5005 Mar  2 05:06 pilotlog.txt
[2026-03-02 05:06:55] -rw------- 1 boinc boinc    836987 Mar  2 05:06 log.48838581._003136.job.log.1
[2026-03-02 05:06:55] -rw------- 1 boinc boinc       357 Mar  2 05:06 output.list
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc       620 Mar  2 05:06 runtime_log
[2026-03-02 05:06:55] -rw------- 1 boinc boinc   1105920 Mar  2 05:06 result.tar.gz
[2026-03-02 05:06:55] -rw------- 1 boinc boinc       660 Mar  2 05:06 zCsLDmEQiG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZH8KDmbWD7qn.diag
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc      8911 Mar  2 05:06 runtime_log.err
[2026-03-02 05:06:55] -rw-r--r-- 1 boinc boinc      8941 Mar  2 05:06 stderr.txt
[2026-03-02 05:06:55] HITS file was successfully produced:
[2026-03-02 05:06:55] -rw------- 1 boinc boinc 223254865 Mar  2 05:05 shared/HITS.pool.root.1
[2026-03-02 05:06:55]  *** Contents of shared directory: ***
[2026-03-02 05:06:55] total 497544
[2026-03-02 05:06:55] -rw-r--r-- 2 boinc boinc 284502087 Mar  2 03:29 ATLAS.root_0
[2026-03-02 05:06:55] -rw-r--r-- 2 boinc boinc    597971 Mar  2 03:29 input.tar.gz
[2026-03-02 05:06:55] -rw-r--r-- 2 boinc boinc     15845 Mar  2 03:29 start_atlas.sh
[2026-03-02 05:06:55] -rw------- 1 boinc boinc 223254865 Mar  2 05:05 HITS.pool.root.1
[2026-03-02 05:06:55] -rw------- 1 boinc boinc   1105920 Mar  2 05:06 result.tar.gz
05:06:56 (438016): run_atlas exited; CPU time 16638.114852
05:06:56 (438016): called boinc_finish(0)

</stderr_txt>
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