Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:08:54 (5052): wrapper (7.7.26015): starting
22:08:54 (5052): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 22:08:54] Arguments: --nthreads 8
[2026-03-01 22:08:54] Threads: 8
[2026-03-01 22:08:54] Checking for CVMFS
[2026-03-01 22:08:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 22:08:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 22:08:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 22:08:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 22:08:58] 2.11.2.0 15174 109358 130852 156782 1 55 16881829 25165824 899 130560 153 35040461 99.831 23877921 905 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-01 22:08:58] CVMFS is ok
[2026-03-01 22:08:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 22:08:58] Checking for apptainer binary...
[2026-03-01 22:08:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 22:08:58] Running /usr/bin/apptainer --version
[2026-03-01 22:08:58] apptainer version 1.3.2-1.el7
[2026-03-01 22:08:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 22:09:08] cg-vwn376.simple-grid.lan
[2026-03-01 22:09:08] apptainer works
[2026-03-01 22:09:08] Set ATHENA_PROC_NUMBER=8
[2026-03-01 22:09:08] Set ATHENA_CORE_NUMBER=8
[2026-03-01 22:09:08] Starting ATLAS job with PandaID=7033996434
[2026-03-01 22:09:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 03:32:48]  *** The last 200 lines of the pilot log: ***
[2026-03-02 03:32:48] 2026-03-02 02:32:10,675 | INFO     | job 7033996434 has finished - writing final server update
[2026-03-02 03:32:48] 2026-03-02 02:32:10,675 | INFO     | total number of processed events: 400 (read)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,677 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7033996434/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,678 | INFO     | extracted standard info from prmon json
[2026-03-02 03:32:48] 2026-03-02 02:32:10,678 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 03:32:48] 2026-03-02 02:32:10,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 03:32:48] 2026-03-02 02:32:10,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 03:32:48] 2026-03-02 02:32:10,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 03:32:48] 2026-03-02 02:32:10,685 | INFO     | fitting pss+swap vs Time
[2026-03-02 03:32:48] 2026-03-02 02:32:10,686 | INFO     | sum of square deviations: 8971993338.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,693 | INFO     | sum of deviations: 126120267021.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,693 | INFO     | mean x: 1772409343.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,693 | INFO     | mean y: 2490651.4755700324
[2026-03-02 03:32:48] 2026-03-02 02:32:10,693 | INFO     | intersect: -24912456472.137104
[2026-03-02 03:32:48] 2026-03-02 02:32:10,694 | INFO     | chi2: 8.99312325063489
[2026-03-02 03:32:48] 2026-03-02 02:32:10,694 | INFO     | sum of square deviations: 8540720135.5
[2026-03-02 03:32:48] 2026-03-02 02:32:10,698 | INFO     | sum of deviations: 144855978370.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,698 | INFO     | mean x: 1772409190.5
[2026-03-02 03:32:48] 2026-03-02 02:32:10,698 | INFO     | mean y: 2497180.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,698 | INFO     | intersect: -30058676033.566097
[2026-03-02 03:32:48] 2026-03-02 02:32:10,699 | INFO     | chi2: 8.289675044113169
[2026-03-02 03:32:48] 2026-03-02 02:32:10,699 | INFO     | current chi2=8.289675044113169 (change=7.822067894733445 %)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,699 | INFO     | right removable region: 301
[2026-03-02 03:32:48] 2026-03-02 02:32:10,699 | INFO     | sum of square deviations: 8540720135.5
[2026-03-02 03:32:48] 2026-03-02 02:32:10,703 | INFO     | sum of deviations: 16214644026.500011
[2026-03-02 03:32:48] 2026-03-02 02:32:10,703 | INFO     | mean x: 1772409495.5
[2026-03-02 03:32:48] 2026-03-02 02:32:10,703 | INFO     | mean y: 2529495.6655629138
[2026-03-02 03:32:48] 2026-03-02 02:32:10,703 | INFO     | intersect: -3362407954.8973813
[2026-03-02 03:32:48] 2026-03-02 02:32:10,704 | INFO     | chi2: 3.949896628174252
[2026-03-02 03:32:48] 2026-03-02 02:32:10,704 | INFO     | current chi2=3.949896628174252 (change=56.078700156862624 %)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,704 | INFO     | sum of square deviations: 8123493708.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,708 | INFO     | sum of deviations: -67836583296.000015
[2026-03-02 03:32:48] 2026-03-02 02:32:10,708 | INFO     | mean x: 1772409648.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,708 | INFO     | mean y: 2560187.966329966
[2026-03-02 03:32:48] 2026-03-02 02:32:10,708 | INFO     | intersect: 14803361301.750618
[2026-03-02 03:32:48] 2026-03-02 02:32:10,709 | INFO     | chi2: 1.1594632381506647
[2026-03-02 03:32:48] 2026-03-02 02:32:10,709 | INFO     | current chi2=1.1594632381506647 (change=70.64573209637135 %)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,709 | INFO     | sum of square deviations: 7720081493.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,715 | INFO     | sum of deviations: -82871163748.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,716 | INFO     | mean x: 1772409800.5
[2026-03-02 03:32:48] 2026-03-02 02:32:10,716 | INFO     | mean y: 2565843.9452054794
[2026-03-02 03:32:48] 2026-03-02 02:32:10,716 | INFO     | intersect: 19028487129.747303
[2026-03-02 03:32:48] 2026-03-02 02:32:10,717 | INFO     | chi2: 1.0167666318662327
[2026-03-02 03:32:48] 2026-03-02 02:32:10,717 | INFO     | current chi2=1.0167666318662327 (change=12.30712640031882 %)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,717 | INFO     | left removable region: 30
[2026-03-02 03:32:48] 2026-03-02 02:32:10,717 | INFO     | sum of square deviations: 6171352920.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,720 | INFO     | sum of deviations: -42867594877.00001
[2026-03-02 03:32:48] 2026-03-02 02:32:10,720 | INFO     | mean x: 1772410075.0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,720 | INFO     | mean y: 2566123.066420664
[2026-03-02 03:32:48] 2026-03-02 02:32:10,721 | INFO     | intersect: 12314122119.934156
[2026-03-02 03:32:48] 2026-03-02 02:32:10,721 | INFO     | chi2: 0.18679466526014435
[2026-03-02 03:32:48] 2026-03-02 02:32:10,721 | INFO     | current memory leak: -6.95 B/s (using 271 data points, chi2=0.19)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,722 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,722 | INFO     | ..............................
[2026-03-02 03:32:48] 2026-03-02 02:32:10,722 | INFO     | . Timing measurements:
[2026-03-02 03:32:48] 2026-03-02 02:32:10,722 | INFO     | . get job = 0 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | . initial setup = 122 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | . payload setup = 144 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | . stage-in = 0 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | . payload execution = 18857 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | . stage-out = 6 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | . log creation = 1 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,723 | INFO     | ..............................
[2026-03-02 03:32:48] 2026-03-02 02:32:10,849 | INFO     | 
[2026-03-02 03:32:48] 2026-03-02 02:32:10,849 | INFO     | job summary report
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | --------------------------------------------------
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | PanDA job id: 7033996434
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | task id: 48838581
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | errors: (none)
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | pilot state: finished 
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | transexitcode: 0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,850 | INFO     | exeerrorcode: 0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | exeerrordiag: 
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | exitcode: 0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | exitmsg: OK
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | cpuconsumptiontime: 71218 s
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | nevents: 400
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | neventsw: 0
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | pid: 13441
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | pgrp: 13441
[2026-03-02 03:32:48] 2026-03-02 02:32:10,851 | INFO     | corecount: 8
[2026-03-02 03:32:48] 2026-03-02 02:32:10,852 | INFO     | event service: False
[2026-03-02 03:32:48] 2026-03-02 02:32:10,852 | INFO     | sizes: {0: 2281868, 1: 2282329, 12: 2282329, 19005: 2314873, 19013: 2323929, 19014: 2324067}
[2026-03-02 03:32:48] 2026-03-02 02:32:10,852 | INFO     | --------------------------------------------------
[2026-03-02 03:32:48] 2026-03-02 02:32:10,852 | INFO     | 
[2026-03-02 03:32:48] 2026-03-02 02:32:10,852 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-03-02 03:32:48] 2026-03-02 02:32:11,442 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,442 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,442 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,442 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,444 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 03:32:48] 2026-03-02 02:32:11,445 | INFO     | job 7033996434 has completed (purged errors)
[2026-03-02 03:32:48] 2026-03-02 02:32:11,445 | INFO     | overall cleanup function is called
[2026-03-02 03:32:48] 2026-03-02 02:32:12,454 | INFO     | --- collectZombieJob: --- 10, [13441]
[2026-03-02 03:32:48] 2026-03-02 02:32:12,454 | INFO     | zombie collector waiting for pid 13441
[2026-03-02 03:32:48] 2026-03-02 02:32:12,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 03:32:48] 2026-03-02 02:32:12,454 | INFO     | collected zombie processes
[2026-03-02 03:32:48] 2026-03-02 02:32:12,455 | INFO     | will attempt to kill all subprocesses of pid=13441
[2026-03-02 03:32:48] 2026-03-02 02:32:12,543 | INFO     | process IDs to be killed: [13441] (in reverse order)
[2026-03-02 03:32:48] 2026-03-02 02:32:13,720 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 03:32:48] 2026-03-02 02:32:13,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 03:32:48] 2026-03-02 02:32:13,722 | INFO     | did not find any defunct processes belonging to 13441
[2026-03-02 03:32:48] 2026-03-02 02:32:13,727 | INFO     | did not find any defunct processes belonging to 13441
[2026-03-02 03:32:48] 2026-03-02 02:32:13,727 | INFO     | ready for new job
[2026-03-02 03:32:48] 2026-03-02 02:32:13,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 03:32:48] 2026-03-02 02:32:13,730 | INFO     | **************************************
[2026-03-02 03:32:48] 2026-03-02 02:32:13,730 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 03:32:48] 2026-03-02 02:32:13,730 | INFO     | **************************************
[2026-03-02 03:32:48] 2026-03-02 02:32:13,730 | INFO     | 
[2026-03-02 03:32:48] 2026-03-02 02:32:13,731 | INFO     | pilot is running in a VM
[2026-03-02 03:32:48] 2026-03-02 02:32:13,731 | INFO     | architecture information:
[2026-03-02 03:32:48] 2026-03-02 02:32:13,752 | INFO     | executing command: cat /etc/os-release
[2026-03-02 03:32:48] 2026-03-02 02:32:14,166 | INFO     | cat /etc/os-release:
[2026-03-02 03:32:48] NAME="CentOS Linux"
[2026-03-02 03:32:48] VERSION="7 (Core)"
[2026-03-02 03:32:48] ID="centos"
[2026-03-02 03:32:48] ID_LIKE="rhel fedora"
[2026-03-02 03:32:48] VERSION_ID="7"
[2026-03-02 03:32:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 03:32:48] ANSI_COLOR="0;31"
[2026-03-02 03:32:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 03:32:48] HOME_URL="https://www.centos.org/"
[2026-03-02 03:32:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 03:32:48] 
[2026-03-02 03:32:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 03:32:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 03:32:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 03:32:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 03:32:48] 
[2026-03-02 03:32:48] 2026-03-02 02:32:14,166 | INFO     | **************************************
[2026-03-02 03:32:48] 2026-03-02 02:32:14,670 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-03-02 03:32:48] 2026-03-02 02:32:14,856 | INFO     | sufficient remaining disk space (497226350592 B)
[2026-03-02 03:32:48] 2026-03-02 02:32:14,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 03:32:48] 2026-03-02 02:32:14,856 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 03:32:48] 2026-03-02 02:32:14,857 | INFO     | update_server=False
[2026-03-02 03:32:48] 2026-03-02 02:32:14,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 03:32:48] 2026-03-02 02:32:14,991 | INFO     | all data control threads have been joined
[2026-03-02 03:32:48] 2026-03-02 02:32:15,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 03:32:48] 2026-03-02 02:32:15,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 03:32:48] 2026-03-02 02:32:15,312 | INFO     | aborting loop
[2026-03-02 03:32:48] 2026-03-02 02:32:15,418 | INFO     | all job control threads have been joined
[2026-03-02 03:32:48] 2026-03-02 02:32:15,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 03:32:48] 2026-03-02 02:32:15,863 | INFO     | [job] retrieve thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:15,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 03:32:48] 2026-03-02 02:32:15,872 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:15,889 | INFO     | [data] copytool_in thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:15,997 | INFO     | [data] control thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:16,319 | INFO     | all payload control threads have been joined
[2026-03-02 03:32:48] 2026-03-02 02:32:16,321 | INFO     | [job] job monitor thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:16,377 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:16,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:16,424 | INFO     | [job] control thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:16,567 | INFO     | [job] validate thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:16,870 | INFO     | [job] queue monitor thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:17,094 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:17,102 | INFO     | [data] copytool_out thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:17,325 | INFO     | [payload] control thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:17,351 | INFO     | [payload] failed_post thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:17,422 | INFO     | [payload] validate_post thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:19,743 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 03:32:48] 2026-03-02 02:32:35,951 | INFO     | [monitor] cgroup control has ended
[2026-03-02 03:32:48] 2026-03-02 02:32:37,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661952362304)>', '<ExcThread(monitor, started 139661380933376)>']
[2026-03-02 03:32:48] 2026-03-02 02:32:42,459 | INFO     | all workflow threads have been joined
[2026-03-02 03:32:48] 2026-03-02 02:32:42,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 03:32:48] 2026-03-02 02:32:42,459 | INFO     | traces error code: 0
[2026-03-02 03:32:48] 2026-03-02 02:32:42,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 03:32:48] 2026-03-02 02:32:43,292 | INFO     | PID=9010 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | INFO     | .. there are 2 such processes running
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | CRITICAL | thread 'MainThread' is not alive
[2026-03-02 03:32:48] 2026-03-02 02:32:43,293 | INFO     | [monitor] control thread has ended
[2026-03-02 03:32:48] 2026-03-02 02:32:43,618 [wrapper] ==== pilot stdout END ====
[2026-03-02 03:32:48] 2026-03-02 02:32:43,718 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 03:32:48] 2026-03-02 02:32:43,816 [wrapper] pilotpid: 9010
[2026-03-02 03:32:48] 2026-03-02 02:32:43,907 [wrapper] Pilot exit status: 0
[2026-03-02 03:32:48] 2026-03-02 02:32:44,402 [wrapper] pandaids: 7033996434
[2026-03-02 03:32:48] 2026-03-02 02:32:44,960 [wrapper] cleanup supervisor_pilot 20030 9011
[2026-03-02 03:32:48] 2026-03-02 02:32:45,059 [wrapper] Test setup, not cleaning
[2026-03-02 03:32:48] 2026-03-02 02:32:45,146 [wrapper] apfmon messages muted
[2026-03-02 03:32:48] 2026-03-02 02:32:45,243 [wrapper] ==== wrapper stdout END ====
[2026-03-02 03:32:48] 2026-03-02 02:32:45,321 [wrapper] ==== wrapper stderr END ====
[2026-03-02 03:32:48]  *** Error codes and diagnostics ***
[2026-03-02 03:32:48]     "exeErrorCode": 0,
[2026-03-02 03:32:48]     "exeErrorDiag": "",
[2026-03-02 03:32:48]     "pilotErrorCode": 0,
[2026-03-02 03:32:48]     "pilotErrorDiag": "",
[2026-03-02 03:32:48]  *** Listing of results directory ***
[2026-03-02 03:32:48] total 516736
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc    584627 Feb 28 23:55 pilot3.tar.gz
[2026-03-02 03:32:48] -rwx------. 1 boinc boinc     36322 Feb 28 23:56 runpilot2-wrapper.sh
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc      5111 Feb 28 23:57 queuedata.json
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc       100 Mar  1 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 03:32:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 22:08 run_atlas
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc       105 Mar  1 22:08 job.xml
[2026-03-02 03:32:48] -rw-r--r--. 2 boinc boinc 288238373 Mar  1 22:08 EVNT.48220205._000121.pool.root.1
[2026-03-02 03:32:48] -rw-r--r--. 2 boinc boinc     15845 Mar  1 22:08 start_atlas.sh
[2026-03-02 03:32:48] drwxrwx--x. 2 boinc boinc        68 Mar  1 22:08 shared
[2026-03-02 03:32:48] -rw-r--r--. 2 boinc boinc    597978 Mar  1 22:08 input.tar.gz
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc      6392 Mar  1 22:08 init_data.xml
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc         0 Mar  1 22:08 boinc_lockfile
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc      2588 Mar  1 22:09 pandaJob.out
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc       415 Mar  1 22:14 workernode_map.json
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc    998184 Mar  1 22:15 agis_schedconf.cvmfs.json
[2026-03-02 03:32:48] drwx------. 5 boinc boinc      4096 Mar  1 22:15 pilot3
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc 230615375 Mar  2 03:30 HITS.48838581._002770.pool.root.1
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc       531 Mar  2 03:31 boinc_task_state.xml
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc        95 Mar  2 03:31 pilot_heartbeat.json
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc      1012 Mar  2 03:31 memory_monitor_summary.json
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc   1513015 Mar  2 03:32 agis_ddmendpoints.agis.ALL.json
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc    524844 Mar  2 03:32 log.48838581._002770.job.log.tgz.1
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc      6318 Mar  2 03:32 heartbeat.json
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc      8192 Mar  2 03:32 boinc_mmap_file
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc        28 Mar  2 03:32 wrapper_checkpoint.txt
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc       889 Mar  2 03:32 pilotlog.txt
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc   2659592 Mar  2 03:32 log.48838581._002770.job.log.1
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc       357 Mar  2 03:32 output.list
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc       620 Mar  2 03:32 runtime_log
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc   3205120 Mar  2 03:32 result.tar.gz
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc      8832 Mar  2 03:32 runtime_log.err
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc       656 Mar  2 03:32 1IxKDmzPiG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmEW6KDmuH9iin.diag
[2026-03-02 03:32:48] -rw-r--r--. 1 boinc boinc     20607 Mar  2 03:32 stderr.txt
[2026-03-02 03:32:48] HITS file was successfully produced:
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc 230615375 Mar  2 03:30 shared/HITS.pool.root.1
[2026-03-02 03:32:48]  *** Contents of shared directory: ***
[2026-03-02 03:32:48] total 510428
[2026-03-02 03:32:48] -rw-r--r--. 2 boinc boinc 288238373 Mar  1 22:08 ATLAS.root_0
[2026-03-02 03:32:48] -rw-r--r--. 2 boinc boinc     15845 Mar  1 22:08 start_atlas.sh
[2026-03-02 03:32:48] -rw-r--r--. 2 boinc boinc    597978 Mar  1 22:08 input.tar.gz
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc 230615375 Mar  2 03:30 HITS.pool.root.1
[2026-03-02 03:32:48] -rw-------. 1 boinc boinc   3205120 Mar  2 03:32 result.tar.gz
03:32:49 (5052): run_atlas exited; CPU time 71423.165999
03:32:49 (5052): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN