Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:40 (376164): wrapper (7.7.26015): starting
07:46:40 (376164): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 07:46:40] Arguments: --nthreads 4
[2026-03-01 07:46:40] Threads: 4
[2026-03-01 07:46:40] Checking for CVMFS
[2026-03-01 07:46:40] No cvmfs_config command found, will try listing directly
[2026-03-01 07:46:40] CVMFS is ok
[2026-03-01 07:46:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 07:46:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 07:46:40] Further information can be found at the LHC@home message board.
[2026-03-01 07:46:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 07:46:40] Checking for apptainer binary...
[2026-03-01 07:46:40] which: no apptainer in ((null))
[2026-03-01 07:46:40] apptainer is not installed, using version from CVMFS
[2026-03-01 07:46:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 07:46:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot140/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-01 07:46:40] apptainer works
[2026-03-01 07:46:40] Set ATHENA_PROC_NUMBER=4
[2026-03-01 07:46:40] Set ATHENA_CORE_NUMBER=4
[2026-03-01 07:46:40] Starting ATLAS job with PandaID=7033545082
[2026-03-01 07:46:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot140/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 09:20:07]  *** The last 200 lines of the pilot log: ***
[2026-03-01 09:20:07]  replicas=None
[2026-03-01 09:20:07]  scope=mc23_13p6TeV
[2026-03-01 09:20:07]  status=None
[2026-03-01 09:20:07]  status_code=0
[2026-03-01 09:20:07]  storage_token=
[2026-03-01 09:20:07]  surl=/var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/log.48843995._000004.job.log.tgz.1
[2026-03-01 09:20:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/6d/log.48843995._000004.job.log.tgz.1
[2026-03-01 09:20:07]  workdir=None
[2026-03-01 09:20:07] ]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,661 | INFO     | transferring file log.48843995._000004.job.log.tgz.1 from /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/log.48843995._000004.job.log.tgz.1 to /var/lib/
[2026-03-01 09:20:07] 2026-03-01 08:19:29,661 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/log.48843995._000004.job.log.tgz.1 /var/lib/boinc/var/slot140/slots/0/
[2026-03-01 09:20:07] 2026-03-01 08:19:29,676 | INFO     | adding to output.list: log.48843995._000004.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/6d/log.48843995._000004.job.log.tg
[2026-03-01 09:20:07] 2026-03-01 08:19:29,677 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 09:20:07] 2026-03-01 08:19:29,677 | INFO     | summary of transferred files:
[2026-03-01 09:20:07] 2026-03-01 08:19:29,677 | INFO     |  -- lfn=log.48843995._000004.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 09:20:07] 2026-03-01 08:19:29,677 | INFO     | stage-out finished correctly
[2026-03-01 09:20:07] 2026-03-01 08:19:29,725 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 09:20:07] 2026-03-01 08:19:29,771 | INFO     | job 7033545082 has state=finished
[2026-03-01 09:20:07] 2026-03-01 08:19:29,771 | INFO     | preparing for final server update for job 7033545082 in state='finished'
[2026-03-01 09:20:07] 2026-03-01 08:19:29,771 | INFO     | reading metadata from: /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/jobReport.json
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot140/slots/0/workernode_map.json
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | INFO     | this job has now completed (state=finished)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | INFO     | log transfer has been attempted: DONE
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | INFO     | job 7033545082 has finished - writing final server update
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16052/.job.ad'
[2026-03-01 09:20:07] 2026-03-01 08:19:29,773 | INFO     | total number of processed events: 400 (read)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,794 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,794 | INFO     | extracted standard info from prmon json
[2026-03-01 09:20:07] 2026-03-01 08:19:29,794 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 09:20:07] 2026-03-01 08:19:29,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 09:20:07] 2026-03-01 08:19:29,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 09:20:07] 2026-03-01 08:19:29,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | fitting pss+swap vs Time
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | sum of square deviations: 183761585.0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | sum of deviations: 336205038.0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | mean x: 1772350470.5
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | mean y: 2335104.880952381
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | intersect: -3240307568.6885557
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | chi2: 0.00038235001946113344
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | current memory leak: 1.83 B/s (using 84 data points, chi2=0.00)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,796 | INFO     | could have reported an average CPU frequency of 3580 MHz (7 samples)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | ..............................
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . Timing measurements:
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . get job = 0 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . initial setup = 5 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . payload setup = 5 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . stage-in = 0 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . payload execution = 5536 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . stage-out = 0 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | . log creation = 0 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,797 | INFO     | ..............................
[2026-03-01 09:20:07] 2026-03-01 08:19:29,842 | INFO     | 
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | job summary report
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | --------------------------------------------------
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | PanDA job id: 7033545082
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | task id: 48843995
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | errors: (none)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | pilot state: finished 
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | transexitcode: 0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | exeerrorcode: 0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | exeerrordiag: 
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | exitcode: 0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | exitmsg: OK
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | cpuconsumptiontime: 21077 s
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | nevents: 400
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | neventsw: 0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | pid: 387223
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | pgrp: 387223
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | corecount: 4
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | event service: False
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | sizes: {0: 2282346, 11: 2282346, 5545: 2318011, 5546: 2318149}
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | --------------------------------------------------
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | 
[2026-03-01 09:20:07] 2026-03-01 08:19:29,843 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot140/slots/0
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | job 7033545082 has completed (purged errors)
[2026-03-01 09:20:07] 2026-03-01 08:19:29,862 | INFO     | overall cleanup function is called
[2026-03-01 09:20:07] 2026-03-01 08:19:30,869 | INFO     | --- collectZombieJob: --- 10, [387223]
[2026-03-01 09:20:07] 2026-03-01 08:19:30,869 | INFO     | zombie collector waiting for pid 387223
[2026-03-01 09:20:07] 2026-03-01 08:19:30,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 09:20:07] 2026-03-01 08:19:30,869 | INFO     | collected zombie processes
[2026-03-01 09:20:07] 2026-03-01 08:19:30,869 | INFO     | will attempt to kill all subprocesses of pid=387223
[2026-03-01 09:20:07] 2026-03-01 08:19:31,345 | INFO     | process IDs to be killed: [387223] (in reverse order)
[2026-03-01 09:20:07] 2026-03-01 08:19:31,589 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 09:20:07] 2026-03-01 08:19:31,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 09:20:07] 2026-03-01 08:19:31,622 | INFO     | did not find any defunct processes belonging to 387223
[2026-03-01 09:20:07] 2026-03-01 08:19:31,654 | INFO     | did not find any defunct processes belonging to 387223
[2026-03-01 09:20:07] 2026-03-01 08:19:31,654 | INFO     | ready for new job
[2026-03-01 09:20:07] 2026-03-01 08:19:31,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 09:20:07] 2026-03-01 08:19:31,656 | INFO     | **************************************
[2026-03-01 09:20:07] 2026-03-01 08:19:31,656 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 09:20:07] 2026-03-01 08:19:31,656 | INFO     | **************************************
[2026-03-01 09:20:07] 2026-03-01 08:19:31,656 | INFO     | 
[2026-03-01 09:20:07] 2026-03-01 08:19:31,662 | INFO     | architecture information:
[2026-03-01 09:20:07] 2026-03-01 08:19:31,663 | INFO     | executing command: cat /etc/os-release
[2026-03-01 09:20:07] 2026-03-01 08:19:31,677 | INFO     | cat /etc/os-release:
[2026-03-01 09:20:07] NAME="CentOS Linux"
[2026-03-01 09:20:07] VERSION="7 (Core)"
[2026-03-01 09:20:07] ID="centos"
[2026-03-01 09:20:07] ID_LIKE="rhel fedora"
[2026-03-01 09:20:07] VERSION_ID="7"
[2026-03-01 09:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 09:20:07] ANSI_COLOR="0;31"
[2026-03-01 09:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 09:20:07] HOME_URL="https://www.centos.org/"
[2026-03-01 09:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 09:20:07] 
[2026-03-01 09:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 09:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 09:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 09:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 09:20:07] 
[2026-03-01 09:20:07] 2026-03-01 08:19:31,677 | INFO     | **************************************
[2026-03-01 09:20:07] 2026-03-01 08:19:32,180 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-01 09:20:07] 2026-03-01 08:19:32,200 | INFO     | sufficient remaining disk space (244294090752 B)
[2026-03-01 09:20:07] 2026-03-01 08:19:32,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 09:20:07] 2026-03-01 08:19:32,200 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 09:20:07] 2026-03-01 08:19:32,200 | INFO     | update_server=False
[2026-03-01 09:20:07] 2026-03-01 08:19:32,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 09:20:07] 2026-03-01 08:19:32,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 09:20:07] 2026-03-01 08:19:32,251 | INFO     | all payload control threads have been joined
[2026-03-01 09:20:07] 2026-03-01 08:19:32,547 | INFO     | all job control threads have been joined
[2026-03-01 09:20:07] 2026-03-01 08:19:32,577 | WARNING  | process 387223 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 09:20:07] 2026-03-01 08:19:32,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 09:20:07] 2026-03-01 08:19:32,951 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 09:20:07] 2026-03-01 08:19:32,951 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 09:20:07] 2026-03-01 08:19:32,952 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-01 09:20:07] 2026-03-01 08:19:32,952 | WARNING  | maxPSS not found in memory monitor output
[2026-03-01 09:20:07] 2026-03-01 08:19:32,952 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/payload.stdout) since it has not been created yet
[2026-03-01 09:20:07] 2026-03-01 08:19:32,952 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-01 09:20:07] 2026-03-01 08:19:32,956 | INFO     | all data control threads have been joined
[2026-03-01 09:20:07] 2026-03-01 08:19:32,965 | INFO     | sufficient remaining disk space (244295139328 B)
[2026-03-01 09:20:07] 2026-03-01 08:19:32,965 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-01 09:20:07] 2026-03-01 08:19:32,965 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7033545082/HITS.48843995._000004.pool.root.1 since it does not exist
[2026-03-01 09:20:07] 2026-03-01 08:19:33,205 | INFO     | [job] retrieve thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,257 | INFO     | [payload] control thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,322 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,439 | INFO     | [payload] validate_post thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,487 | INFO     | number of running child processes to parent process 387223: 1
[2026-03-01 09:20:07] 2026-03-01 08:19:33,487 | INFO     | maximum number of monitored processes: 6
[2026-03-01 09:20:07] 2026-03-01 08:19:33,487 | INFO     | aborting job monitoring since job object (job id=7033545082) has expired
[2026-03-01 09:20:07] 2026-03-01 08:19:33,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 09:20:07] 2026-03-01 08:19:33,488 | INFO     | will abort loop
[2026-03-01 09:20:07] 2026-03-01 08:19:33,514 | INFO     | [data] copytool_in thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,552 | INFO     | [job] control thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,563 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:33,961 | INFO     | [data] control thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,094 | INFO     | [payload] failed_post thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,493 | INFO     | [job] job monitor thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,567 | INFO     | [job] validate thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,640 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,696 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,736 | INFO     | [data] copytool_out thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:34,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 09:20:07] 2026-03-01 08:19:35,858 | INFO     | [job] queue monitor thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:19:36,206 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 09:20:07] 2026-03-01 08:20:02,071 | INFO     | [monitor] cgroup control has ended
[2026-03-01 09:20:07] 2026-03-01 08:20:02,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22448587675456)>', '<ExcThread(monitor, started 22448344139520)>']
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | INFO     | PID=380779 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | INFO     | .. there are 51 such processes running
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 09:20:07] 2026-03-01 08:20:03,010 | INFO     | [monitor] control thread has ended
[2026-03-01 09:20:07] 2026-03-01 08:20:07,552 | INFO     | all workflow threads have been joined
[2026-03-01 09:20:07] 2026-03-01 08:20:07,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 09:20:07] 2026-03-01 08:20:07,552 | INFO     | traces error code: 0
[2026-03-01 09:20:07] 2026-03-01 08:20:07,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 09:20:07] 2026-03-01 08:20:07,693 [wrapper] ==== pilot stdout END ====
[2026-03-01 09:20:07] 2026-03-01 08:20:07,697 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 09:20:07] 2026-03-01 08:20:07,700 [wrapper] pilotpid: 380779
[2026-03-01 09:20:07] 2026-03-01 08:20:07,702 [wrapper] Pilot exit status: 0
[2026-03-01 09:20:07] 2026-03-01 08:20:07,711 [wrapper] pandaids: 7033545082
[2026-03-01 09:20:07] 2026-03-01 08:20:07,843 [wrapper] cleanup supervisor_pilot 1105553 380780
[2026-03-01 09:20:07] 2026-03-01 08:20:07,846 [wrapper] Test setup, not cleaning
[2026-03-01 09:20:07] 2026-03-01 08:20:07,848 [wrapper] apfmon messages muted
[2026-03-01 09:20:07] 2026-03-01 08:20:07,850 [wrapper] ==== wrapper stdout END ====
[2026-03-01 09:20:07] 2026-03-01 08:20:07,851 [wrapper] ==== wrapper stderr END ====
[2026-03-01 09:20:07]  *** Error codes and diagnostics ***
[2026-03-01 09:20:07]     "exeErrorCode": 0,
[2026-03-01 09:20:07]     "exeErrorDiag": "",
[2026-03-01 09:20:07]     "pilotErrorCode": 0,
[2026-03-01 09:20:07]     "pilotErrorDiag": "",
[2026-03-01 09:20:07]  *** Listing of results directory ***
[2026-03-01 09:20:07] total 422528
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc    584627 Feb 28 16:58 pilot3.tar.gz
[2026-03-01 09:20:07] -rwx------. 1 boinc boinc     36322 Feb 28 17:00 runpilot2-wrapper.sh
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc      5111 Feb 28 17:01 queuedata.json
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc       100 Mar  1 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 09:20:07] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 07:46 run_atlas
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc       105 Mar  1 07:46 job.xml
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc      6703 Mar  1 07:46 init_data.xml
[2026-03-01 09:20:07] -rw-r--r--. 2 boinc boinc 257588923 Mar  1 07:46 EVNT.48448231._000001.pool.root.1
[2026-03-01 09:20:07] -rw-r--r--. 2 boinc boinc     15845 Mar  1 07:46 start_atlas.sh
[2026-03-01 09:20:07] drwxrwx--x. 2 boinc boinc      4096 Mar  1 07:46 shared
[2026-03-01 09:20:07] -rw-r--r--. 2 boinc boinc    597981 Mar  1 07:46 input.tar.gz
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc         0 Mar  1 07:46 boinc_lockfile
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc      2617 Mar  1 07:46 pandaJob.out
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc    998782 Mar  1 07:46 agis_schedconf.cvmfs.json
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc   1513015 Mar  1 07:46 agis_ddmendpoints.agis.ALL.json
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc       443 Mar  1 07:46 workernode_map.json
[2026-03-01 09:20:07] drwx------. 5 boinc boinc      4096 Mar  1 07:46 pilot3
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc 169017310 Mar  1 09:19 HITS.48843995._000004.pool.root.1
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc       529 Mar  1 09:19 boinc_task_state.xml
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc        95 Mar  1 09:19 pilot_heartbeat.json
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc      1029 Mar  1 09:19 memory_monitor_summary.json
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc    265805 Mar  1 09:19 log.48843995._000004.job.log.tgz.1
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc      6349 Mar  1 09:19 heartbeat.json
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc      8192 Mar  1 09:19 boinc_mmap_file
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc        27 Mar  1 09:19 wrapper_checkpoint.txt
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc      6374 Mar  1 09:20 pilotlog.txt
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc    802965 Mar  1 09:20 log.48843995._000004.job.log.1
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc       357 Mar  1 09:20 output.list
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc       620 Mar  1 09:20 runtime_log
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc   1085440 Mar  1 09:20 result.tar.gz
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc      9221 Mar  1 09:20 runtime_log.err
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc       663 Mar  1 09:20 7VcMDmuubG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgs5KDmyk510m.diag
[2026-03-01 09:20:07] -rw-r--r--. 1 boinc boinc     21928 Mar  1 09:20 stderr.txt
[2026-03-01 09:20:07] HITS file was successfully produced:
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc 169017310 Mar  1 09:19 shared/HITS.pool.root.1
[2026-03-01 09:20:07]  *** Contents of shared directory: ***
[2026-03-01 09:20:07] total 418276
[2026-03-01 09:20:07] -rw-r--r--. 2 boinc boinc 257588923 Mar  1 07:46 ATLAS.root_0
[2026-03-01 09:20:07] -rw-r--r--. 2 boinc boinc     15845 Mar  1 07:46 start_atlas.sh
[2026-03-01 09:20:07] -rw-r--r--. 2 boinc boinc    597981 Mar  1 07:46 input.tar.gz
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc 169017310 Mar  1 09:19 HITS.pool.root.1
[2026-03-01 09:20:07] -rw-------. 1 boinc boinc   1085440 Mar  1 09:20 result.tar.gz
09:20:09 (376164): run_atlas exited; CPU time 21325.954271
09:20:09 (376164): called boinc_finish(0)

</stderr_txt>
]]>

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