Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:07:15 (509576): wrapper (7.7.26015): starting
08:07:15 (509576): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 08:07:15] Arguments: --nthreads 4
[2026-03-01 08:07:15] Threads: 4
[2026-03-01 08:07:15] Checking for CVMFS
[2026-03-01 08:07:15] No cvmfs_config command found, will try listing directly
[2026-03-01 08:07:15] CVMFS is ok
[2026-03-01 08:07:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 08:07:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 08:07:15] Further information can be found at the LHC@home message board.
[2026-03-01 08:07:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 08:07:15] Checking for apptainer binary...
[2026-03-01 08:07:15] which: no apptainer in ((null))
[2026-03-01 08:07:15] apptainer is not installed, using version from CVMFS
[2026-03-01 08:07:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 08:07:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-01 08:07:15] apptainer works
[2026-03-01 08:07:15] Set ATHENA_PROC_NUMBER=4
[2026-03-01 08:07:15] Set ATHENA_CORE_NUMBER=4
[2026-03-01 08:07:15] Starting ATLAS job with PandaID=7033638875
[2026-03-01 08:07:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 09:51:51]  *** The last 200 lines of the pilot log: ***
[2026-03-01 09:51:51] 2026-03-01 08:51:30,505 | INFO     | total number of processed events: 400 (read)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,509 | INFO     | time since job start (6241s) is within the limit (349056.0s)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,524 | INFO     | using path: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7033638875/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,525 | INFO     | extracted standard info from prmon json
[2026-03-01 09:51:51] 2026-03-01 08:51:30,525 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 09:51:51] 2026-03-01 08:51:30,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 09:51:51] 2026-03-01 08:51:30,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 09:51:51] 2026-03-01 08:51:30,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | fitting pss+swap vs Time
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | sum of square deviations: 329031285.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | sum of deviations: 9512921665.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | mean x: 1772351951.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | mean y: 2324806.4215686275
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | intersect: -51239748580.89939
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | chi2: 1.0976066752968374
[2026-03-01 09:51:51] 2026-03-01 08:51:30,527 | INFO     | sum of square deviations: 282974608.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | sum of deviations: 9011237261.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | mean x: 1772351799.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | mean y: 2323144.0824742266
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | intersect: -56437661643.34828
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | chi2: 1.099647766473815
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | current chi2=1.099647766473815 (change=-0.18595834217439405 %)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | right removable region: 96
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | sum of square deviations: 282974608.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | sum of deviations: 241554632.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | mean x: 1772352104.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | mean y: 2354470.154639175
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | intersect: -1510572301.9045193
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | chi2: 0.0038759404816781553
[2026-03-01 09:51:51] 2026-03-01 08:51:30,528 | INFO     | current chi2=0.0038759404816781553 (change=99.64687345941752 %)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | sum of square deviations: 241429643.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | sum of deviations: 1025065807.4999999
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | mean x: 1772352256.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | mean y: 2351604.445652174
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | intersect: -7522729717.004255
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | chi2: 0.0003959048224555353
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | current chi2=0.0003959048224555353 (change=89.78558044616511 %)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | sum of square deviations: 204163828.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | sum of deviations: 753664577.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | mean x: 1772352409.0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | mean y: 2352711.804597701
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | intersect: -6540232435.17803
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | chi2: 0.00031823849367516047
[2026-03-01 09:51:51] 2026-03-01 08:51:30,529 | INFO     | current chi2=0.00031823849367516047 (change=19.617424283609896 %)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | left removable region: 30
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | sum of square deviations: 89127252.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | sum of deviations: 148888586.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | mean x: 1772352683.5
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | mean y: 2355615.6818181816
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | intersect: -2958389593.2630763
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | chi2: 6.095784997860959e-05
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | current memory leak: 1.67 B/s (using 66 data points, chi2=0.00)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | could have reported an average CPU frequency of 3566 MHz (7 samples)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | ..............................
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . Timing measurements:
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . get job = 0 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . initial setup = 5 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . payload setup = 5 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . stage-in = 0 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . payload execution = 6216 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . stage-out = 0 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,530 | INFO     | . log creation = 0 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,531 | INFO     | ..............................
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | 
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | job summary report
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | --------------------------------------------------
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | PanDA job id: 7033638875
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | task id: 48838581
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | errors: (none)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | pilot state: finished 
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | transexitcode: 0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,578 | INFO     | exeerrorcode: 0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | exeerrordiag: 
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | exitcode: 0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | exitmsg: OK
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | cpuconsumptiontime: 23689 s
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | nevents: 400
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | neventsw: 0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | pid: 521932
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | pgrp: 521932
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | corecount: 4
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | event service: False
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | sizes: {0: 2281879, 1: 2282340, 11: 2282340, 6226: 2318209, 6230: 2318403}
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | --------------------------------------------------
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | 
[2026-03-01 09:51:51] 2026-03-01 08:51:30,579 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/0
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | job 7033638875 has completed (purged errors)
[2026-03-01 09:51:51] 2026-03-01 08:51:30,601 | INFO     | overall cleanup function is called
[2026-03-01 09:51:51] 2026-03-01 08:51:31,608 | INFO     | --- collectZombieJob: --- 10, [521932]
[2026-03-01 09:51:51] 2026-03-01 08:51:31,608 | INFO     | zombie collector waiting for pid 521932
[2026-03-01 09:51:51] 2026-03-01 08:51:31,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 09:51:51] 2026-03-01 08:51:31,608 | INFO     | collected zombie processes
[2026-03-01 09:51:51] 2026-03-01 08:51:31,608 | INFO     | will attempt to kill all subprocesses of pid=521932
[2026-03-01 09:51:51] 2026-03-01 08:51:32,973 | INFO     | PID=515863 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 09:51:51] 2026-03-01 08:51:32,973 | INFO     | .. there are 51 such processes running
[2026-03-01 09:51:51] 2026-03-01 08:51:33,030 | INFO     | process IDs to be killed: [521932] (in reverse order)
[2026-03-01 09:51:51] 2026-03-01 08:51:33,263 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 09:51:51] 2026-03-01 08:51:33,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 09:51:51] 2026-03-01 08:51:33,293 | INFO     | did not find any defunct processes belonging to 521932
[2026-03-01 09:51:51] 2026-03-01 08:51:33,323 | INFO     | did not find any defunct processes belonging to 521932
[2026-03-01 09:51:51] 2026-03-01 08:51:33,323 | INFO     | ready for new job
[2026-03-01 09:51:51] 2026-03-01 08:51:33,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 09:51:51] 2026-03-01 08:51:33,325 | INFO     | **************************************
[2026-03-01 09:51:51] 2026-03-01 08:51:33,325 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 09:51:51] 2026-03-01 08:51:33,325 | INFO     | **************************************
[2026-03-01 09:51:51] 2026-03-01 08:51:33,325 | INFO     | 
[2026-03-01 09:51:51] 2026-03-01 08:51:33,331 | INFO     | architecture information:
[2026-03-01 09:51:51] 2026-03-01 08:51:33,335 | INFO     | executing command: cat /etc/os-release
[2026-03-01 09:51:51] 2026-03-01 08:51:33,349 | INFO     | cat /etc/os-release:
[2026-03-01 09:51:51] NAME="CentOS Linux"
[2026-03-01 09:51:51] VERSION="7 (Core)"
[2026-03-01 09:51:51] ID="centos"
[2026-03-01 09:51:51] ID_LIKE="rhel fedora"
[2026-03-01 09:51:51] VERSION_ID="7"
[2026-03-01 09:51:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 09:51:51] ANSI_COLOR="0;31"
[2026-03-01 09:51:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 09:51:51] HOME_URL="https://www.centos.org/"
[2026-03-01 09:51:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 09:51:51] 
[2026-03-01 09:51:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 09:51:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 09:51:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 09:51:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 09:51:51] 
[2026-03-01 09:51:51] 2026-03-01 08:51:33,349 | INFO     | **************************************
[2026-03-01 09:51:51] 2026-03-01 08:51:33,850 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/0
[2026-03-01 09:51:51] 2026-03-01 08:51:33,866 | INFO     | sufficient remaining disk space (240442671104 B)
[2026-03-01 09:51:51] 2026-03-01 08:51:33,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 09:51:51] 2026-03-01 08:51:33,866 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 09:51:51] 2026-03-01 08:51:33,866 | INFO     | update_server=False
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 09:51:51] 2026-03-01 08:51:33,867 | INFO     | aborting loop
[2026-03-01 09:51:51] 2026-03-01 08:51:33,900 | INFO     | all data control threads have been joined
[2026-03-01 09:51:51] 2026-03-01 08:51:33,966 | INFO     | all payload control threads have been joined
[2026-03-01 09:51:51] 2026-03-01 08:51:34,477 | INFO     | all job control threads have been joined
[2026-03-01 09:51:51] 2026-03-01 08:51:34,774 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 09:51:51] 2026-03-01 08:51:34,872 | INFO     | [job] retrieve thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:34,872 | INFO     | [job] job monitor thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:34,905 | INFO     | [data] control thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:34,930 | INFO     | [payload] validate_post thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:34,971 | INFO     | [data] copytool_in thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:34,971 | INFO     | [payload] control thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:35,482 | INFO     | [job] control thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:35,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 09:51:51] 2026-03-01 08:51:35,610 | INFO     | [payload] failed_post thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:35,860 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:36,029 | INFO     | [job] validate thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:36,282 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:36,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 09:51:51] 2026-03-01 08:51:36,344 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:36,593 | INFO     | [job] queue monitor thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:36,779 | INFO     | [data] copytool_out thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:39,413 | INFO     | [monitor] cgroup control has ended
[2026-03-01 09:51:51] 2026-03-01 08:51:40,291 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:44,419 | INFO     | job.realtimelogging is not enabled
[2026-03-01 09:51:51] 2026-03-01 08:51:45,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 09:51:51] 2026-03-01 08:51:46,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22610043840320)>', '<ExcThread(monitor, started 22609801778944)>']
[2026-03-01 09:51:51] 2026-03-01 08:51:46,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 09:51:51] 2026-03-01 08:51:46,933 | INFO     | [monitor] control thread has ended
[2026-03-01 09:51:51] 2026-03-01 08:51:51,292 | INFO     | all workflow threads have been joined
[2026-03-01 09:51:51] 2026-03-01 08:51:51,292 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 09:51:51] 2026-03-01 08:51:51,293 | INFO     | traces error code: 0
[2026-03-01 09:51:51] 2026-03-01 08:51:51,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 09:51:51] 2026-03-01 08:51:51,419 [wrapper] ==== pilot stdout END ====
[2026-03-01 09:51:51] 2026-03-01 08:51:51,421 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 09:51:51] 2026-03-01 08:51:51,424 [wrapper] pilotpid: 515863
[2026-03-01 09:51:51] 2026-03-01 08:51:51,426 [wrapper] Pilot exit status: 0
[2026-03-01 09:51:51] 2026-03-01 08:51:51,434 [wrapper] pandaids: 7033638875
[2026-03-01 09:51:51] 2026-03-01 08:51:51,567 [wrapper] cleanup supervisor_pilot 1270057 515864
[2026-03-01 09:51:51] 2026-03-01 08:51:51,571 [wrapper] Test setup, not cleaning
[2026-03-01 09:51:51] 2026-03-01 08:51:51,577 [wrapper] apfmon messages muted
[2026-03-01 09:51:51] 2026-03-01 08:51:51,579 [wrapper] ==== wrapper stdout END ====
[2026-03-01 09:51:51] 2026-03-01 08:51:51,581 [wrapper] ==== wrapper stderr END ====
[2026-03-01 09:51:51]  *** Error codes and diagnostics ***
[2026-03-01 09:51:51]     "exeErrorCode": 0,
[2026-03-01 09:51:51]     "exeErrorDiag": "",
[2026-03-01 09:51:51]     "pilotErrorCode": 0,
[2026-03-01 09:51:51]     "pilotErrorDiag": "",
[2026-03-01 09:51:51]  *** Listing of results directory ***
[2026-03-01 09:51:51] total 507436
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc    584627 Feb 28 19:22 pilot3.tar.gz
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc      5111 Feb 28 19:23 queuedata.json
[2026-03-01 09:51:51] -rwx------. 1 boinc boinc     36322 Feb 28 19:23 runpilot2-wrapper.sh
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc       100 Mar  1 08:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 09:51:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 08:07 run_atlas
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc       105 Mar  1 08:07 job.xml
[2026-03-01 09:51:51] -rw-r--r--. 2 boinc boinc    597973 Mar  1 08:07 input.tar.gz
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc      6703 Mar  1 08:07 init_data.xml
[2026-03-01 09:51:51] -rw-r--r--. 2 boinc boinc 289922443 Mar  1 08:07 EVNT.48220205._000117.pool.root.1
[2026-03-01 09:51:51] -rw-r--r--. 2 boinc boinc     15845 Mar  1 08:07 start_atlas.sh
[2026-03-01 09:51:51] drwxrwx--x. 2 boinc boinc      4096 Mar  1 08:07 shared
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc         0 Mar  1 08:07 boinc_lockfile
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc      2588 Mar  1 08:07 pandaJob.out
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc    998782 Mar  1 08:07 agis_schedconf.cvmfs.json
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc   1513015 Mar  1 08:07 agis_ddmendpoints.agis.ALL.json
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc       444 Mar  1 08:07 workernode_map.json
[2026-03-01 09:51:51] drwx------. 5 boinc boinc      4096 Mar  1 08:07 pilot3
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc 223387123 Mar  1 09:50 HITS.48838581._002670.pool.root.1
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc        95 Mar  1 09:50 pilot_heartbeat.json
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc       530 Mar  1 09:51 boinc_task_state.xml
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc      1030 Mar  1 09:51 memory_monitor_summary.json
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc    289596 Mar  1 09:51 log.48838581._002670.job.log.tgz.1
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc      6348 Mar  1 09:51 heartbeat.json
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc      8192 Mar  1 09:51 boinc_mmap_file
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc        27 Mar  1 09:51 wrapper_checkpoint.txt
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc      4631 Mar  1 09:51 pilotlog.txt
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc    898497 Mar  1 09:51 log.48838581._002670.job.log.1
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc       357 Mar  1 09:51 output.list
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc       620 Mar  1 09:51 runtime_log
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc   1208320 Mar  1 09:51 result.tar.gz
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc       663 Mar  1 09:51 tcULDmq9dG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjm7KDmqkCEjn.diag
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc      9221 Mar  1 09:51 runtime_log.err
[2026-03-01 09:51:51] -rw-r--r--. 1 boinc boinc     20813 Mar  1 09:51 stderr.txt
[2026-03-01 09:51:51] HITS file was successfully produced:
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc 223387123 Mar  1 09:50 shared/HITS.pool.root.1
[2026-03-01 09:51:51]  *** Contents of shared directory: ***
[2026-03-01 09:51:51] total 503068
[2026-03-01 09:51:51] -rw-r--r--. 2 boinc boinc    597973 Mar  1 08:07 input.tar.gz
[2026-03-01 09:51:51] -rw-r--r--. 2 boinc boinc 289922443 Mar  1 08:07 ATLAS.root_0
[2026-03-01 09:51:51] -rw-r--r--. 2 boinc boinc     15845 Mar  1 08:07 start_atlas.sh
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc 223387123 Mar  1 09:50 HITS.pool.root.1
[2026-03-01 09:51:51] -rw-------. 1 boinc boinc   1208320 Mar  1 09:51 result.tar.gz
09:51:53 (509576): run_atlas exited; CPU time 23951.162053
09:51:53 (509576): called boinc_finish(0)

</stderr_txt>
]]>

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