Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:59:43 (3054884): wrapper (7.7.26015): starting
18:59:43 (3054884): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 18:59:43] Arguments: --nthreads 8
[2026-02-28 18:59:43] Threads: 8
[2026-02-28 18:59:43] Checking for CVMFS
[2026-02-28 18:59:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 18:59:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 18:59:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 18:59:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 18:59:47] 2.13.3.0 3970 4504 51188 156752 1 50 10804229 20480000 2230 130560 0 8861114 99.996 174323 170 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-02-28 18:59:47] CVMFS is ok
[2026-02-28 18:59:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 18:59:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 18:59:47] Further information can be found at the LHC@home message board.
[2026-02-28 18:59:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 18:59:47] Checking for apptainer binary...
[2026-02-28 18:59:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 18:59:47] Running /usr/bin/apptainer --version
[2026-02-28 18:59:47] apptainer version 1.4.5
[2026-02-28 18:59:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 18:59:47] jonny-linux
[2026-02-28 18:59:47] apptainer works
[2026-02-28 18:59:47] Set ATHENA_PROC_NUMBER=8
[2026-02-28 18:59:47] Set ATHENA_CORE_NUMBER=8
[2026-02-28 18:59:47] Starting ATLAS job with PandaID=7033814178
[2026-02-28 18:59:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 20:11:51]  *** The last 200 lines of the pilot log: ***
[2026-02-28 20:11:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-28 20:11:51]  replicas=None
[2026-02-28 20:11:51]  scope=mc23_13p6TeV
[2026-02-28 20:11:51]  status=None
[2026-02-28 20:11:51]  status_code=0
[2026-02-28 20:11:51]  storage_token=
[2026-02-28 20:11:51]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-7033814178/log.48838432._004526.job.log.tgz.1
[2026-02-28 20:11:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/5b/log.48838432._004526.job.log.tgz.1
[2026-02-28 20:11:51]  workdir=None
[2026-02-28 20:11:51] ]
[2026-02-28 20:11:51] 2026-03-01 03:11:12,678 | INFO     | transferring file log.48838432._004526.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-7033814178/log.48838432._004526.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-28 20:11:51] 2026-03-01 03:11:12,678 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-7033814178/log.48838432._004526.job.log.tgz.1 /var/lib/boinc/slots/1/log.48838432._004526.job
[2026-02-28 20:11:51] 2026-03-01 03:11:12,693 | INFO     | adding to output.list: log.48838432._004526.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/5b/log.48838432._004526.job.log.tg
[2026-02-28 20:11:51] 2026-03-01 03:11:12,693 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-28 20:11:51] 2026-03-01 03:11:12,694 | INFO     | summary of transferred files:
[2026-02-28 20:11:51] 2026-03-01 03:11:12,694 | INFO     |  -- lfn=log.48838432._004526.job.log.tgz.1, status_code=0, status=transferred
[2026-02-28 20:11:51] 2026-03-01 03:11:12,694 | INFO     | stage-out finished correctly
[2026-02-28 20:11:51] 2026-03-01 03:11:12,767 | INFO     | PID=3059150 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 20:11:51] 2026-03-01 03:11:12,767 | INFO     | .. there are 4 such processes running
[2026-02-28 20:11:51] 2026-03-01 03:11:13,767 | INFO     | time since job start (4259s) is within the limit (349056.0s)
[2026-02-28 20:11:51] 2026-03-01 03:11:15,218 | WARNING  | process 3063712 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 20:11:51] 2026-03-01 03:11:15,219 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7033814178/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 20:11:51] 2026-03-01 03:11:15,367 | INFO     | number of running child processes to parent process 3063712: 1
[2026-02-28 20:11:51] 2026-03-01 03:11:15,367 | INFO     | maximum number of monitored processes: 6
[2026-02-28 20:11:51] 2026-03-01 03:11:15,773 | INFO     | time since job start (4261s) is within the limit (349056.0s)
[2026-02-28 20:11:51] 2026-03-01 03:11:16,091 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 20:11:51] 2026-03-01 03:11:17,778 | INFO     | time since job start (4263s) is within the limit (349056.0s)
[2026-02-28 20:11:51] 2026-03-01 03:11:17,869 | INFO     | monitor loop #320: job 0:7033814178 is in state 'finished'
[2026-02-28 20:11:51] 2026-03-01 03:11:17,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,409 | INFO     | job 7033814178 has state=finished
[2026-02-28 20:11:51] 2026-03-01 03:11:18,409 | INFO     | preparing for final server update for job 7033814178 in state='finished'
[2026-02-28 20:11:51] 2026-03-01 03:11:18,409 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-7033814178/jobReport.json
[2026-02-28 20:11:51] 2026-03-01 03:11:18,411 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-02-28 20:11:51] 2026-03-01 03:11:18,411 | INFO     | this job has now completed (state=finished)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,411 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,411 | INFO     | log transfer has been attempted: DONE
[2026-02-28 20:11:51] 2026-03-01 03:11:18,411 | INFO     | job 7033814178 has finished - writing final server update
[2026-02-28 20:11:51] 2026-03-01 03:11:18,411 | INFO     | total number of processed events: 400 (read)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,415 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7033814178/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,416 | INFO     | extracted standard info from prmon json
[2026-02-28 20:11:51] 2026-03-01 03:11:18,416 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 20:11:51] 2026-03-01 03:11:18,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 20:11:51] 2026-03-01 03:11:18,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 20:11:51] 2026-03-01 03:11:18,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 20:11:51] 2026-03-01 03:11:18,417 | INFO     | fitting pss+swap vs Time
[2026-02-28 20:11:51] 2026-03-01 03:11:18,417 | INFO     | sum of square deviations: 77515872.0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,417 | INFO     | sum of deviations: -1161938675.0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | mean x: 1772332628.0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | mean y: 2558010.015873016
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | intersect: 26569269733.74631
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | chi2: 0.01736138863394828
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | current memory leak: -14.99 B/s (using 63 data points, chi2=0.02)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | could have reported an average CPU frequency of 3802 MHz (6 samples)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | ..............................
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | . Timing measurements:
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | . get job = 0 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | . initial setup = 6 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | . payload setup = 3 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | . stage-in = 0 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,418 | INFO     | . payload execution = 4238 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,419 | INFO     | . stage-out = 0 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,419 | INFO     | . log creation = 0 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,419 | INFO     | ..............................
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | 
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | job summary report
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | --------------------------------------------------
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | PanDA job id: 7033814178
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | task id: 48838432
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | errors: (none)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | pilot state: finished 
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | transexitcode: 0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | exeerrorcode: 0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | exeerrordiag: 
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | exitcode: 0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | exitmsg: OK
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | cpuconsumptiontime: 31851 s
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | nevents: 400
[2026-02-28 20:11:51] 2026-03-01 03:11:18,483 | INFO     | neventsw: 0
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | pid: 3063712
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | pgrp: 3063712
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | corecount: 8
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | event service: False
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | sizes: {0: 2281860, 1: 2282321, 11: 2282321, 4246: 2308375, 4247: 2317373, 4251: 2317429, 4253: 2317751}
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | --------------------------------------------------
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | 
[2026-02-28 20:11:51] 2026-03-01 03:11:18,484 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-02-28 20:11:51] 2026-03-01 03:11:18,500 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,500 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | job 7033814178 has completed (purged errors)
[2026-02-28 20:11:51] 2026-03-01 03:11:18,501 | INFO     | overall cleanup function is called
[2026-02-28 20:11:51] 2026-03-01 03:11:19,509 | INFO     | --- collectZombieJob: --- 10, [3063712]
[2026-02-28 20:11:51] 2026-03-01 03:11:19,509 | INFO     | zombie collector waiting for pid 3063712
[2026-02-28 20:11:51] 2026-03-01 03:11:19,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 20:11:51] 2026-03-01 03:11:19,509 | INFO     | collected zombie processes
[2026-02-28 20:11:51] 2026-03-01 03:11:19,509 | INFO     | will attempt to kill all subprocesses of pid=3063712
[2026-02-28 20:11:51] 2026-03-01 03:11:19,644 | INFO     | process IDs to be killed: [3063712] (in reverse order)
[2026-02-28 20:11:51] 2026-03-01 03:11:19,697 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 20:11:51] 2026-03-01 03:11:19,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 20:11:51] 2026-03-01 03:11:19,701 | INFO     | did not find any defunct processes belonging to 3063712
[2026-02-28 20:11:51] 2026-03-01 03:11:19,704 | INFO     | did not find any defunct processes belonging to 3063712
[2026-02-28 20:11:51] 2026-03-01 03:11:19,704 | INFO     | ready for new job
[2026-02-28 20:11:51] 2026-03-01 03:11:19,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 20:11:51] 2026-03-01 03:11:19,706 | INFO     | **************************************
[2026-02-28 20:11:51] 2026-03-01 03:11:19,706 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 20:11:51] 2026-03-01 03:11:19,706 | INFO     | **************************************
[2026-02-28 20:11:51] 2026-03-01 03:11:19,706 | INFO     | 
[2026-02-28 20:11:51] 2026-03-01 03:11:19,707 | INFO     | architecture information:
[2026-02-28 20:11:51] 2026-03-01 03:11:19,707 | INFO     | executing command: cat /etc/os-release
[2026-02-28 20:11:51] 2026-03-01 03:11:19,719 | INFO     | cat /etc/os-release:
[2026-02-28 20:11:51] NAME="CentOS Linux"
[2026-02-28 20:11:51] VERSION="7 (Core)"
[2026-02-28 20:11:51] ID="centos"
[2026-02-28 20:11:51] ID_LIKE="rhel fedora"
[2026-02-28 20:11:51] VERSION_ID="7"
[2026-02-28 20:11:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 20:11:51] ANSI_COLOR="0;31"
[2026-02-28 20:11:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 20:11:51] HOME_URL="https://www.centos.org/"
[2026-02-28 20:11:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 20:11:51] 
[2026-02-28 20:11:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 20:11:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 20:11:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 20:11:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 20:11:51] 
[2026-02-28 20:11:51] 2026-03-01 03:11:19,719 | INFO     | **************************************
[2026-02-28 20:11:51] 2026-03-01 03:11:20,222 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-02-28 20:11:51] 2026-03-01 03:11:20,235 | INFO     | sufficient remaining disk space (26560430080 B)
[2026-02-28 20:11:51] 2026-03-01 03:11:20,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 20:11:51] 2026-03-01 03:11:20,235 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 20:11:51] 2026-03-01 03:11:20,235 | INFO     | update_server=False
[2026-02-28 20:11:51] 2026-03-01 03:11:20,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 20:11:51] 2026-03-01 03:11:20,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 20:11:51] 2026-03-01 03:11:20,361 | INFO     | all job control threads have been joined
[2026-02-28 20:11:51] 2026-03-01 03:11:20,373 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 20:11:51] 2026-03-01 03:11:20,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 20:11:51] 2026-03-01 03:11:20,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 20:11:51] 2026-03-01 03:11:20,373 | INFO     | will abort loop
[2026-02-28 20:11:51] 2026-03-01 03:11:20,740 | INFO     | all payload control threads have been joined
[2026-02-28 20:11:51] 2026-03-01 03:11:20,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 20:11:51] 2026-03-01 03:11:20,842 | INFO     | [monitor] cgroup control has ended
[2026-02-28 20:11:51] 2026-03-01 03:11:20,971 | INFO     | all data control threads have been joined
[2026-02-28 20:11:51] 2026-03-01 03:11:21,241 | INFO     | [job] retrieve thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,241 | INFO     | [job] queue monitor thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,366 | INFO     | [job] control thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,378 | INFO     | [job] job monitor thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,472 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,745 | INFO     | [payload] control thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,803 | INFO     | [payload] validate_post thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,946 | INFO     | [job] validate thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:21,976 | INFO     | [data] control thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:22,057 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:22,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 20:11:51] 2026-03-01 03:11:22,169 | INFO     | [payload] failed_post thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:22,247 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:22,648 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:22,704 | INFO     | [data] copytool_in thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:22,775 | INFO     | [data] copytool_out thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:26,160 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 20:11:51] 2026-03-01 03:11:27,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129944925001536)>', '<ExcThread(monitor, started 129944302647040)>']
[2026-02-28 20:11:51] 2026-03-01 03:11:32,188 | INFO     | all workflow threads have been joined
[2026-02-28 20:11:51] 2026-03-01 03:11:32,188 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 20:11:51] 2026-03-01 03:11:32,188 | INFO     | traces error code: 0
[2026-02-28 20:11:51] 2026-03-01 03:11:32,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 20:11:51] 2026-03-01 03:11:50,976 | INFO     | PID=3059150 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 20:11:51] 2026-03-01 03:11:50,977 | INFO     | .. there are 4 such processes running
[2026-02-28 20:11:51] 2026-03-01 03:11:50,977 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 20:11:51] 2026-03-01 03:11:50,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 20:11:51] 2026-03-01 03:11:50,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 20:11:51] 2026-03-01 03:11:50,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 20:11:51] 2026-03-01 03:11:50,977 | INFO     | [monitor] control thread has ended
[2026-02-28 20:11:51] 2026-03-01 03:11:51,059 [wrapper] ==== pilot stdout END ====
[2026-02-28 20:11:51] 2026-03-01 03:11:51,062 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 20:11:51] 2026-03-01 03:11:51,064 [wrapper] pilotpid: 3059150
[2026-02-28 20:11:51] 2026-03-01 03:11:51,066 [wrapper] Pilot exit status: 0
[2026-02-28 20:11:51] 2026-03-01 03:11:51,074 [wrapper] pandaids: 7033814178
[2026-02-28 20:11:51] 2026-03-01 03:11:51,109 [wrapper] cleanup supervisor_pilot 3108368 3059151
[2026-02-28 20:11:51] 2026-03-01 03:11:51,111 [wrapper] Test setup, not cleaning
[2026-02-28 20:11:51] 2026-03-01 03:11:51,113 [wrapper] apfmon messages muted
[2026-02-28 20:11:51] 2026-03-01 03:11:51,115 [wrapper] ==== wrapper stdout END ====
[2026-02-28 20:11:51] 2026-03-01 03:11:51,117 [wrapper] ==== wrapper stderr END ====
[2026-02-28 20:11:51]  *** Error codes and diagnostics ***
[2026-02-28 20:11:51]     "exeErrorCode": 0,
[2026-02-28 20:11:51]     "exeErrorDiag": "",
[2026-02-28 20:11:51]     "pilotErrorCode": 0,
[2026-02-28 20:11:51]     "pilotErrorDiag": "",
[2026-02-28 20:11:51]  *** Listing of results directory ***
[2026-02-28 20:11:51] total 502044
[2026-02-28 20:11:51] -rw-r--r-- 1 radeon2 radeon2      5111 Feb 28 13:22 queuedata.json
[2026-02-28 20:11:51] -rw-r--r-- 1 radeon2 radeon2    584627 Feb 28 13:22 pilot3.tar.gz
[2026-02-28 20:11:51] -rwx------ 1 radeon2 radeon2     36322 Feb 28 13:22 runpilot2-wrapper.sh
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2       100 Feb 28 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 20:11:51] -rwxr-xr-x 1 radeon2 radeon2      7986 Feb 28 18:59 run_atlas
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2       105 Feb 28 18:59 job.xml
[2026-02-28 20:11:51] -rw-r--r-- 2 radeon2 radeon2 286357093 Feb 28 18:59 EVNT.48220101._000172.pool.root.1
[2026-02-28 20:11:51] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 28 18:59 start_atlas.sh
[2026-02-28 20:11:51] drwxrwx--x 2 radeon2 radeon2      4096 Feb 28 18:59 shared
[2026-02-28 20:11:51] -rw-r--r-- 2 radeon2 radeon2    597978 Feb 28 18:59 input.tar.gz
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2      9248 Feb 28 18:59 init_data.xml
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 28 18:59 boinc_setup_complete
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 28 18:59 boinc_lockfile
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2      2581 Feb 28 18:59 pandaJob.out
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2    998790 Feb 28 19:00 agis_schedconf.cvmfs.json
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2   1513015 Feb 28 19:00 agis_ddmendpoints.agis.ALL.json
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2       418 Feb 28 19:00 workernode_map.json
[2026-02-28 20:11:51] drwx------ 5 radeon2 radeon2      4096 Feb 28 19:00 pilot3
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2 221879529 Feb 28 20:10 HITS.48838432._004526.pool.root.1
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2       529 Feb 28 20:10 boinc_task_state.xml
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2        95 Feb 28 20:11 pilot_heartbeat.json
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2      1024 Feb 28 20:11 memory_monitor_summary.json
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2    331430 Feb 28 20:11 log.48838432._004526.job.log.tgz.1
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2      6282 Feb 28 20:11 heartbeat.json
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2        27 Feb 28 20:11 wrapper_checkpoint.txt
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2      8192 Feb 28 20:11 boinc_mmap_file
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2       822 Feb 28 20:11 pilotlog.txt
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2    637698 Feb 28 20:11 log.48838432._004526.job.log.1
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2       357 Feb 28 20:11 output.list
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2       620 Feb 28 20:11 runtime_log
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2    983040 Feb 28 20:11 result.tar.gz
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2      8826 Feb 28 20:11 runtime_log.err
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2       659 Feb 28 20:11 oFJNDmH0fG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnE6KDmeyaMnn.diag
[2026-02-28 20:11:51] -rw-rw-r-- 1 radeon2 radeon2     21944 Feb 28 20:11 stderr.txt
[2026-02-28 20:11:51] HITS file was successfully produced:
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2 221879529 Feb 28 20:10 shared/HITS.pool.root.1
[2026-02-28 20:11:51]  *** Contents of shared directory: ***
[2026-02-28 20:11:51] total 497892
[2026-02-28 20:11:51] -rw-r--r-- 2 radeon2 radeon2 286357093 Feb 28 18:59 ATLAS.root_0
[2026-02-28 20:11:51] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 28 18:59 start_atlas.sh
[2026-02-28 20:11:51] -rw-r--r-- 2 radeon2 radeon2    597978 Feb 28 18:59 input.tar.gz
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2 221879529 Feb 28 20:10 HITS.pool.root.1
[2026-02-28 20:11:51] -rw------- 1 radeon2 radeon2    983040 Feb 28 20:11 result.tar.gz
20:11:52 (3054884): run_atlas exited; CPU time 31896.950285
20:11:52 (3054884): called boinc_finish(0)

</stderr_txt>
]]>

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