Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:31 (1978666): wrapper (7.7.26015): starting
14:48:31 (1978666): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 14:48:31] Arguments: --nthreads 4
[2026-03-01 14:48:31] Threads: 4
[2026-03-01 14:48:31] Checking for CVMFS
[2026-03-01 14:48:31] No cvmfs_config command found, will try listing directly
[2026-03-01 14:48:31] CVMFS is ok
[2026-03-01 14:48:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 14:48:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 14:48:31] Further information can be found at the LHC@home message board.
[2026-03-01 14:48:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 14:48:31] Checking for apptainer binary...
[2026-03-01 14:48:31] which: no apptainer in ((null))
[2026-03-01 14:48:31] apptainer is not installed, using version from CVMFS
[2026-03-01 14:48:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 14:48:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-03-01 14:48:31] apptainer works
[2026-03-01 14:48:31] Set ATHENA_PROC_NUMBER=4
[2026-03-01 14:48:31] Set ATHENA_CORE_NUMBER=4
[2026-03-01 14:48:31] Starting ATLAS job with PandaID=7032082487
[2026-03-01 14:48:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 17:40:15]  *** The last 200 lines of the pilot log: ***
[2026-03-01 17:40:15] 2026-03-01 16:39:07,629 | INFO     | job 7032082487 has state=finished
[2026-03-01 17:40:15] 2026-03-01 16:39:07,629 | INFO     | preparing for final server update for job 7032082487 in state='finished'
[2026-03-01 17:40:15] 2026-03-01 16:39:07,629 | INFO     | reading metadata from: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7032082487/jobReport.json
[2026-03-01 17:40:15] 2026-03-01 16:39:07,632 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot20/slots/0/workernode_map.json
[2026-03-01 17:40:15] 2026-03-01 16:39:07,632 | INFO     | this job has now completed (state=finished)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,633 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,633 | INFO     | log transfer has been attempted: DONE
[2026-03-01 17:40:15] 2026-03-01 16:39:07,633 | INFO     | job 7032082487 has finished - writing final server update
[2026-03-01 17:40:15] 2026-03-01 16:39:07,633 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_635120/.job.ad'
[2026-03-01 17:40:15] 2026-03-01 16:39:07,633 | INFO     | total number of processed events: 400 (read)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,645 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7032082487/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,646 | INFO     | extracted standard info from prmon json
[2026-03-01 17:40:15] 2026-03-01 16:39:07,646 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 17:40:15] 2026-03-01 16:39:07,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 17:40:15] 2026-03-01 16:39:07,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 17:40:15] 2026-03-01 16:39:07,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 17:40:15] 2026-03-01 16:39:07,650 | INFO     | fitting pss+swap vs Time
[2026-03-01 17:40:15] 2026-03-01 16:39:07,650 | INFO     | sum of square deviations: 1444149868.0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,651 | INFO     | sum of deviations: 19838400968.000004
[2026-03-01 17:40:15] 2026-03-01 16:39:07,652 | INFO     | mean x: 1772378021.0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,652 | INFO     | mean y: 2317880.0598802394
[2026-03-01 17:40:15] 2026-03-01 16:39:07,652 | INFO     | intersect: -24344979188.32744
[2026-03-01 17:40:15] 2026-03-01 16:39:07,652 | INFO     | chi2: 1.4044609444955496
[2026-03-01 17:40:15] 2026-03-01 16:39:07,652 | INFO     | sum of square deviations: 1318277740.5
[2026-03-01 17:40:15] 2026-03-01 16:39:07,653 | INFO     | sum of deviations: 19022190925.500004
[2026-03-01 17:40:15] 2026-03-01 16:39:07,654 | INFO     | mean x: 1772377868.5
[2026-03-01 17:40:15] 2026-03-01 16:39:07,654 | INFO     | mean y: 2316891.3518518517
[2026-03-01 17:40:15] 2026-03-01 16:39:07,654 | INFO     | intersect: -25572347059.167717
[2026-03-01 17:40:15] 2026-03-01 16:39:07,654 | INFO     | chi2: 1.405751291704439
[2026-03-01 17:40:15] 2026-03-01 16:39:07,654 | INFO     | current chi2=1.405751291704439 (change=-0.09187490858657477 %)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,654 | INFO     | right removable region: 161
[2026-03-01 17:40:15] 2026-03-01 16:39:07,655 | INFO     | sum of square deviations: 1318277740.5
[2026-03-01 17:40:15] 2026-03-01 16:39:07,655 | INFO     | sum of deviations: -2895843209.499998
[2026-03-01 17:40:15] 2026-03-01 16:39:07,656 | INFO     | mean x: 1772378173.5
[2026-03-01 17:40:15] 2026-03-01 16:39:07,656 | INFO     | mean y: 2345032.9814814813
[2026-03-01 17:40:15] 2026-03-01 16:39:07,656 | INFO     | intersect: 3895704634.4637194
[2026-03-01 17:40:15] 2026-03-01 16:39:07,656 | INFO     | chi2: 0.015547289786026602
[2026-03-01 17:40:15] 2026-03-01 16:39:07,656 | INFO     | current chi2=0.015547289786026602 (change=98.89300661246861 %)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,656 | INFO     | sum of square deviations: 1199940638.0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,657 | INFO     | sum of deviations: -2213507671.0000014
[2026-03-01 17:40:15] 2026-03-01 16:39:07,657 | INFO     | mean x: 1772378326.0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,658 | INFO     | mean y: 2344142.1847133758
[2026-03-01 17:40:15] 2026-03-01 16:39:07,658 | INFO     | intersect: 3271816727.9736958
[2026-03-01 17:40:15] 2026-03-01 16:39:07,658 | INFO     | chi2: 0.014811205333096334
[2026-03-01 17:40:15] 2026-03-01 16:39:07,658 | INFO     | current chi2=0.014811205333096334 (change=4.734487251867116 %)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,658 | INFO     | left removable region: 20
[2026-03-01 17:40:15] 2026-03-01 16:39:07,658 | INFO     | sum of square deviations: 869188390.0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,659 | INFO     | sum of deviations: 454351972.9999998
[2026-03-01 17:40:15] 2026-03-01 16:39:07,659 | INFO     | mean x: 1772378448.0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,659 | INFO     | mean y: 2339539.865248227
[2026-03-01 17:40:15] 2026-03-01 16:39:07,659 | INFO     | intersect: -924138142.0921439
[2026-03-01 17:40:15] 2026-03-01 16:39:07,660 | INFO     | chi2: 0.00805843736721575
[2026-03-01 17:40:15] 2026-03-01 16:39:07,660 | INFO     | current memory leak: 0.52 B/s (using 141 data points, chi2=0.01)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,660 | INFO     | could have reported an average CPU frequency of 2413 MHz (9 samples)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | ..............................
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . Timing measurements:
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . get job = 0 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . initial setup = 7 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . payload setup = 7 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . stage-in = 0 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . payload execution = 10187 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . stage-out = 0 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | . log creation = 0 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,661 | INFO     | ..............................
[2026-03-01 17:40:15] 2026-03-01 16:39:07,949 | INFO     | 
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | job summary report
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | --------------------------------------------------
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | PanDA job id: 7032082487
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | task id: 48843432
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | errors: (none)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 17:40:15] 2026-03-01 16:39:07,950 | INFO     | pilot state: finished 
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | transexitcode: 0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | exeerrorcode: 0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | exeerrordiag: 
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | exitcode: 0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | exitmsg: OK
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | cpuconsumptiontime: 38317 s
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | nevents: 400
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | neventsw: 0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | pid: 1987885
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | pgrp: 1987885
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | corecount: 4
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | event service: False
[2026-03-01 17:40:15] 2026-03-01 16:39:07,951 | INFO     | sizes: {0: 2282138, 1: 2282344, 11: 2282372, 10199: 2311283, 10200: 2320303, 10201: 2320359, 10204: 2320745}
[2026-03-01 17:40:15] 2026-03-01 16:39:07,952 | INFO     | --------------------------------------------------
[2026-03-01 17:40:15] 2026-03-01 16:39:07,952 | INFO     | 
[2026-03-01 17:40:15] 2026-03-01 16:39:07,952 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-01 17:40:15] 2026-03-01 16:39:07,977 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,977 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,977 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,977 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,979 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,979 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 17:40:15] 2026-03-01 16:39:07,979 | INFO     | job 7032082487 has completed (purged errors)
[2026-03-01 17:40:15] 2026-03-01 16:39:07,979 | INFO     | overall cleanup function is called
[2026-03-01 17:40:15] 2026-03-01 16:39:08,986 | INFO     | --- collectZombieJob: --- 10, [1987885]
[2026-03-01 17:40:15] 2026-03-01 16:39:08,987 | INFO     | zombie collector waiting for pid 1987885
[2026-03-01 17:40:15] 2026-03-01 16:39:08,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 17:40:15] 2026-03-01 16:39:08,987 | INFO     | collected zombie processes
[2026-03-01 17:40:15] 2026-03-01 16:39:08,988 | INFO     | will attempt to kill all subprocesses of pid=1987885
[2026-03-01 17:40:15] 2026-03-01 16:39:09,365 | INFO     | process IDs to be killed: [1987885] (in reverse order)
[2026-03-01 17:40:15] 2026-03-01 16:39:09,493 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 17:40:15] 2026-03-01 16:39:09,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 17:40:15] 2026-03-01 16:39:09,505 | INFO     | did not find any defunct processes belonging to 1987885
[2026-03-01 17:40:15] 2026-03-01 16:39:09,515 | INFO     | did not find any defunct processes belonging to 1987885
[2026-03-01 17:40:15] 2026-03-01 16:39:09,516 | INFO     | ready for new job
[2026-03-01 17:40:15] 2026-03-01 16:39:09,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 17:40:15] 2026-03-01 16:39:09,518 | INFO     | **************************************
[2026-03-01 17:40:15] 2026-03-01 16:39:09,518 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 17:40:15] 2026-03-01 16:39:09,518 | INFO     | **************************************
[2026-03-01 17:40:15] 2026-03-01 16:39:09,518 | INFO     | 
[2026-03-01 17:40:15] 2026-03-01 16:39:09,522 | INFO     | architecture information:
[2026-03-01 17:40:15] 2026-03-01 16:39:09,523 | INFO     | executing command: cat /etc/os-release
[2026-03-01 17:40:15] 2026-03-01 16:39:09,539 | INFO     | cat /etc/os-release:
[2026-03-01 17:40:15] NAME="CentOS Linux"
[2026-03-01 17:40:15] VERSION="7 (Core)"
[2026-03-01 17:40:15] ID="centos"
[2026-03-01 17:40:15] ID_LIKE="rhel fedora"
[2026-03-01 17:40:15] VERSION_ID="7"
[2026-03-01 17:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 17:40:15] ANSI_COLOR="0;31"
[2026-03-01 17:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 17:40:15] HOME_URL="https://www.centos.org/"
[2026-03-01 17:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 17:40:15] 
[2026-03-01 17:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 17:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 17:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 17:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 17:40:15] 
[2026-03-01 17:40:15] 2026-03-01 16:39:09,540 | INFO     | **************************************
[2026-03-01 17:40:15] 2026-03-01 16:39:10,043 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-01 17:40:15] 2026-03-01 16:39:10,075 | INFO     | sufficient remaining disk space (678280822784 B)
[2026-03-01 17:40:15] 2026-03-01 16:39:10,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 17:40:15] 2026-03-01 16:39:10,075 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 17:40:15] 2026-03-01 16:39:10,075 | INFO     | update_server=False
[2026-03-01 17:40:15] 2026-03-01 16:39:10,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 17:40:15] 2026-03-01 16:39:10,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 17:40:15] 2026-03-01 16:39:10,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 17:40:15] 2026-03-01 16:39:10,076 | INFO     | aborting loop
[2026-03-01 17:40:15] 2026-03-01 16:39:10,403 | INFO     | all data control threads have been joined
[2026-03-01 17:40:15] 2026-03-01 16:39:10,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 17:40:15] 2026-03-01 16:39:10,988 | INFO     | all job control threads have been joined
[2026-03-01 17:40:15] 2026-03-01 16:39:11,081 | INFO     | [job] retrieve thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,081 | INFO     | [job] job monitor thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,192 | INFO     | all payload control threads have been joined
[2026-03-01 17:40:15] 2026-03-01 16:39:11,409 | INFO     | [data] control thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,422 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,458 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,568 | INFO     | [payload] failed_post thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,974 | INFO     | [job] validate thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:11,994 | INFO     | [job] control thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:12,081 | INFO     | [data] copytool_out thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:12,175 | INFO     | [payload] validate_post thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:12,197 | INFO     | [payload] control thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:12,472 | INFO     | [data] copytool_in thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:12,474 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:12,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 17:40:15] 2026-03-01 16:39:13,771 | INFO     | [job] queue monitor thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:14,813 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:20,516 | INFO     | job.realtimelogging is not enabled
[2026-03-01 17:40:15] 2026-03-01 16:39:21,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 17:40:15] 2026-03-01 16:39:40,510 | INFO     | PID=1983109 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 17:40:15] 2026-03-01 16:39:40,511 | INFO     | .. there are 12 such processes running
[2026-03-01 17:40:15] 2026-03-01 16:39:40,511 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 17:40:15] 2026-03-01 16:39:40,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 17:40:15] 2026-03-01 16:39:40,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 17:40:15] 2026-03-01 16:40:09,476 | INFO     | [monitor] cgroup control has ended
[2026-03-01 17:40:15] 2026-03-01 16:40:10,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23390768768832)>', '<ExcThread(monitor, started 23390450595584)>']
[2026-03-01 17:40:15] 2026-03-01 16:40:10,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 17:40:15] 2026-03-01 16:40:10,659 | INFO     | [monitor] control thread has ended
[2026-03-01 17:40:15] 2026-03-01 16:40:15,506 | INFO     | all workflow threads have been joined
[2026-03-01 17:40:15] 2026-03-01 16:40:15,507 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 17:40:15] 2026-03-01 16:40:15,507 | INFO     | traces error code: 0
[2026-03-01 17:40:15] 2026-03-01 16:40:15,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 17:40:15] 2026-03-01 16:40:15,686 [wrapper] ==== pilot stdout END ====
[2026-03-01 17:40:15] 2026-03-01 16:40:15,689 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 17:40:15] 2026-03-01 16:40:15,691 [wrapper] pilotpid: 1983109
[2026-03-01 17:40:15] 2026-03-01 16:40:15,694 [wrapper] Pilot exit status: 0
[2026-03-01 17:40:15] 2026-03-01 16:40:15,706 [wrapper] pandaids: 7032082487
[2026-03-01 17:40:15] 2026-03-01 16:40:15,782 [wrapper] cleanup supervisor_pilot 2105408 1983110
[2026-03-01 17:40:15] 2026-03-01 16:40:15,785 [wrapper] Test setup, not cleaning
[2026-03-01 17:40:15] 2026-03-01 16:40:15,789 [wrapper] apfmon messages muted
[2026-03-01 17:40:15] 2026-03-01 16:40:15,792 [wrapper] ==== wrapper stdout END ====
[2026-03-01 17:40:15] 2026-03-01 16:40:15,795 [wrapper] ==== wrapper stderr END ====
[2026-03-01 17:40:15]  *** Error codes and diagnostics ***
[2026-03-01 17:40:15]     "exeErrorCode": 0,
[2026-03-01 17:40:15]     "exeErrorDiag": "",
[2026-03-01 17:40:15]     "pilotErrorCode": 0,
[2026-03-01 17:40:15]     "pilotErrorDiag": "",
[2026-03-01 17:40:15]  *** Listing of results directory ***
[2026-03-01 17:40:15] total 407000
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc    584627 Feb 27 21:35 pilot3.tar.gz
[2026-03-01 17:40:15] -rwx------ 1 boinc boinc     36322 Feb 27 21:36 runpilot2-wrapper.sh
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc      5111 Feb 27 21:37 queuedata.json
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc       100 Mar  1 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 17:40:15] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 14:48 run_atlas
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc       105 Mar  1 14:48 job.xml
[2026-03-01 17:40:15] -rw-r--r-- 2 boinc boinc 242883499 Mar  1 14:48 EVNT.48447690._000002.pool.root.1
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc      6636 Mar  1 14:48 init_data.xml
[2026-03-01 17:40:15] -rw-r--r-- 2 boinc boinc     15845 Mar  1 14:48 start_atlas.sh
[2026-03-01 17:40:15] drwxrwx--x 2 boinc boinc      4096 Mar  1 14:48 shared
[2026-03-01 17:40:15] -rw-r--r-- 2 boinc boinc    597967 Mar  1 14:48 input.tar.gz
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc         0 Mar  1 14:48 boinc_lockfile
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc      2607 Mar  1 14:48 pandaJob.out
[2026-03-01 17:40:15] -rw------- 1 boinc boinc    998184 Mar  1 14:48 agis_schedconf.cvmfs.json
[2026-03-01 17:40:15] -rw------- 1 boinc boinc   1513015 Mar  1 14:48 agis_ddmendpoints.agis.ALL.json
[2026-03-01 17:40:15] -rw------- 1 boinc boinc       452 Mar  1 14:48 workernode_map.json
[2026-03-01 17:40:15] drwx------ 5 boinc boinc      4096 Mar  1 14:48 pilot3
[2026-03-01 17:40:15] -rw------- 1 boinc boinc 166365190 Mar  1 17:38 HITS.48843432._000040.pool.root.1
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc       530 Mar  1 17:38 boinc_task_state.xml
[2026-03-01 17:40:15] -rw------- 1 boinc boinc      1033 Mar  1 17:38 memory_monitor_summary.json
[2026-03-01 17:40:15] -rw------- 1 boinc boinc    350509 Mar  1 17:39 log.48843432._000040.job.log.tgz.1
[2026-03-01 17:40:15] -rw------- 1 boinc boinc        95 Mar  1 17:39 pilot_heartbeat.json
[2026-03-01 17:40:15] -rw------- 1 boinc boinc      6392 Mar  1 17:39 heartbeat.json
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc      8192 Mar  1 17:40 boinc_mmap_file
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc        28 Mar  1 17:40 wrapper_checkpoint.txt
[2026-03-01 17:40:15] -rw------- 1 boinc boinc      4902 Mar  1 17:40 pilotlog.txt
[2026-03-01 17:40:15] -rw------- 1 boinc boinc   1444114 Mar  1 17:40 log.48843432._000040.job.log.1
[2026-03-01 17:40:15] -rw------- 1 boinc boinc       357 Mar  1 17:40 output.list
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc       620 Mar  1 17:40 runtime_log
[2026-03-01 17:40:15] -rw------- 1 boinc boinc   1812480 Mar  1 17:40 result.tar.gz
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc      9205 Mar  1 17:40 runtime_log.err
[2026-03-01 17:40:15] -rw------- 1 boinc boinc       664 Mar  1 17:40 HZCMDmwkJG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwv3KDmfmwGGn.diag
[2026-03-01 17:40:15] -rw-r--r-- 1 boinc boinc     21122 Mar  1 17:40 stderr.txt
[2026-03-01 17:40:15] HITS file was successfully produced:
[2026-03-01 17:40:15] -rw------- 1 boinc boinc 166365190 Mar  1 17:38 shared/HITS.pool.root.1
[2026-03-01 17:40:15]  *** Contents of shared directory: ***
[2026-03-01 17:40:15] total 402040
[2026-03-01 17:40:15] -rw-r--r-- 2 boinc boinc 242883499 Mar  1 14:48 ATLAS.root_0
[2026-03-01 17:40:15] -rw-r--r-- 2 boinc boinc     15845 Mar  1 14:48 start_atlas.sh
[2026-03-01 17:40:15] -rw-r--r-- 2 boinc boinc    597967 Mar  1 14:48 input.tar.gz
[2026-03-01 17:40:15] -rw------- 1 boinc boinc 166365190 Mar  1 17:38 HITS.pool.root.1
[2026-03-01 17:40:15] -rw------- 1 boinc boinc   1812480 Mar  1 17:40 result.tar.gz
17:40:17 (1978666): run_atlas exited; CPU time 38744.335231
17:40:17 (1978666): called boinc_finish(0)

</stderr_txt>
]]>

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