Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:29:46 (3817820): wrapper (7.7.26015): starting
09:29:46 (3817820): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 09:29:46] Arguments: --nthreads 4
[2026-03-01 09:29:46] Threads: 4
[2026-03-01 09:29:46] Checking for CVMFS
[2026-03-01 09:29:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 09:29:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 09:29:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 09:29:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 09:29:48] 2.11.0.0 9972 5507 111604 156766 0 50 3651135 4096001 6454 130560 0 11744382 99.996 206405 848 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-01 09:29:48] CVMFS is ok
[2026-03-01 09:29:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 09:29:48] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-01 09:29:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-01 09:29:48] Further information can be found at the LHC@home message board.
[2026-03-01 09:29:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 09:29:48] Checking for apptainer binary...
[2026-03-01 09:29:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 09:29:48] Running /usr/bin/apptainer --version
[2026-03-01 09:29:48] apptainer version 1.4.5
[2026-03-01 09:29:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 09:29:48] x32-linux2
[2026-03-01 09:29:48] apptainer works
[2026-03-01 09:29:48] Set ATHENA_PROC_NUMBER=4
[2026-03-01 09:29:48] Set ATHENA_CORE_NUMBER=4
[2026-03-01 09:29:48] Starting ATLAS job with PandaID=7033785463
[2026-03-01 09:29:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 11:01:19]  *** The last 200 lines of the pilot log: ***
[2026-03-01 11:01:19]  is_altstaged=None
[2026-03-01 11:01:19]  is_tar=False
[2026-03-01 11:01:19]  lfn=log.48700906._000396.job.log.tgz.1
[2026-03-01 11:01:19]  mtime=0
[2026-03-01 11:01:19]  protocol_id=None
[2026-03-01 11:01:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 11:01:19]  replicas=None
[2026-03-01 11:01:19]  scope=mc23_13p6TeV
[2026-03-01 11:01:19]  status=None
[2026-03-01 11:01:19]  status_code=0
[2026-03-01 11:01:19]  storage_token=
[2026-03-01 11:01:19]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-7033785463/log.48700906._000396.job.log.tgz.1
[2026-03-01 11:01:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/1d/log.48700906._000396.job.log.tgz.1
[2026-03-01 11:01:19]  workdir=None
[2026-03-01 11:01:19] ]
[2026-03-01 11:01:19] 2026-03-01 16:00:25,066 | INFO     | transferring file log.48700906._000396.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-7033785463/log.48700906._000396.job.log.tgz.1 to /var/lib/boinc
[2026-03-01 11:01:19] 2026-03-01 16:00:25,066 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-7033785463/log.48700906._000396.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.487009
[2026-03-01 11:01:19] 2026-03-01 16:00:25,080 | INFO     | adding to output.list: log.48700906._000396.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/1d/log.48700906._000396.job.log.tg
[2026-03-01 11:01:19] 2026-03-01 16:00:25,081 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 11:01:19] 2026-03-01 16:00:25,081 | INFO     | summary of transferred files:
[2026-03-01 11:01:19] 2026-03-01 16:00:25,081 | INFO     |  -- lfn=log.48700906._000396.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 11:01:19] 2026-03-01 16:00:25,081 | INFO     | stage-out finished correctly
[2026-03-01 11:01:19] 2026-03-01 16:00:25,659 | INFO     | time since job start (5422s) is within the limit (349056.0s)
[2026-03-01 11:01:19] 2026-03-01 16:00:26,689 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 11:01:19] 2026-03-01 16:00:27,664 | INFO     | time since job start (5424s) is within the limit (349056.0s)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,186 | INFO     | job 7033785463 has state=finished
[2026-03-01 11:01:19] 2026-03-01 16:00:29,186 | INFO     | preparing for final server update for job 7033785463 in state='finished'
[2026-03-01 11:01:19] 2026-03-01 16:00:29,186 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7033785463/jobReport.json
[2026-03-01 11:01:19] 2026-03-01 16:00:29,188 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-03-01 11:01:19] 2026-03-01 16:00:29,188 | INFO     | this job has now completed (state=finished)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,188 | INFO     | log transfer has been attempted: DONE
[2026-03-01 11:01:19] 2026-03-01 16:00:29,188 | INFO     | job 7033785463 has finished - writing final server update
[2026-03-01 11:01:19] 2026-03-01 16:00:29,188 | INFO     | total number of processed events: 400 (read)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,192 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7033785463/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,193 | INFO     | extracted standard info from prmon json
[2026-03-01 11:01:19] 2026-03-01 16:00:29,193 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 11:01:19] 2026-03-01 16:00:29,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 11:01:19] 2026-03-01 16:00:29,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 11:01:19] 2026-03-01 16:00:29,193 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 11:01:19] 2026-03-01 16:00:29,194 | INFO     | fitting pss+swap vs Time
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | sum of square deviations: 170944600.5
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | sum of deviations: -6545242812.5
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | mean x: 1772378197.5
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | mean y: 2349958.1585365855
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | intersect: 67864368555.33898
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | chi2: 0.014789709475006293
[2026-03-01 11:01:19] 2026-03-01 16:00:29,195 | INFO     | current memory leak: -38.29 B/s (using 82 data points, chi2=0.01)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | could have reported an average CPU frequency of 3874 MHz (6 samples)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | ..............................
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . Timing measurements:
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . get job = 0 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . initial setup = 5 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . payload setup = 3 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . stage-in = 0 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . payload execution = 5402 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . stage-out = 0 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | . log creation = 0 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,196 | INFO     | ..............................
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | 
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | job summary report
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | --------------------------------------------------
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | PanDA job id: 7033785463
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | task id: 48700906
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | errors: (none)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 11:01:19] 2026-03-01 16:00:29,259 | INFO     | pilot state: finished 
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | transexitcode: 0
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | exeerrorcode: 0
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | exeerrordiag: 
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | exitcode: 0
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | exitmsg: OK
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | cpuconsumptiontime: 20828 s
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | nevents: 400
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | neventsw: 0
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | pid: 3826570
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | pgrp: 3826570
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | corecount: 4
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | event service: False
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | sizes: {0: 2282216, 11: 2282216, 5409: 2308856, 5410: 2317868, 5411: 2317924, 5414: 2318118}
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | --------------------------------------------------
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | 
[2026-03-01 11:01:19] 2026-03-01 16:00:29,260 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-03-01 11:01:19] 2026-03-01 16:00:29,275 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,275 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 11:01:19] 2026-03-01 16:00:29,276 | INFO     | job 7033785463 has completed (purged errors)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,277 | INFO     | overall cleanup function is called
[2026-03-01 11:01:19] 2026-03-01 16:00:29,722 | WARNING  | process 3826570 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 11:01:19] 2026-03-01 16:00:29,819 | INFO     | using path: /var/lib/boinc-client/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 11:01:19] 2026-03-01 16:00:29,948 | INFO     | number of running child processes to parent process 3826570: 1
[2026-03-01 11:01:19] 2026-03-01 16:00:29,948 | INFO     | maximum number of monitored processes: 6
[2026-03-01 11:01:19] 2026-03-01 16:00:29,948 | INFO     | aborting job monitoring since job object (job id=7033785463) has expired
[2026-03-01 11:01:19] 2026-03-01 16:00:30,281 | INFO     | --- collectZombieJob: --- 10, [3826570]
[2026-03-01 11:01:19] 2026-03-01 16:00:30,281 | INFO     | zombie collector waiting for pid 3826570
[2026-03-01 11:01:19] 2026-03-01 16:00:30,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 11:01:19] 2026-03-01 16:00:30,281 | INFO     | collected zombie processes
[2026-03-01 11:01:19] 2026-03-01 16:00:30,281 | INFO     | will attempt to kill all subprocesses of pid=3826570
[2026-03-01 11:01:19] 2026-03-01 16:00:30,407 | INFO     | process IDs to be killed: [3826570] (in reverse order)
[2026-03-01 11:01:19] 2026-03-01 16:00:30,455 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 11:01:19] 2026-03-01 16:00:30,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 11:01:19] 2026-03-01 16:00:30,459 | INFO     | did not find any defunct processes belonging to 3826570
[2026-03-01 11:01:19] 2026-03-01 16:00:30,463 | INFO     | did not find any defunct processes belonging to 3826570
[2026-03-01 11:01:19] 2026-03-01 16:00:30,463 | INFO     | ready for new job
[2026-03-01 11:01:19] 2026-03-01 16:00:30,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 11:01:19] 2026-03-01 16:00:30,464 | INFO     | **************************************
[2026-03-01 11:01:19] 2026-03-01 16:00:30,464 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 11:01:19] 2026-03-01 16:00:30,465 | INFO     | **************************************
[2026-03-01 11:01:19] 2026-03-01 16:00:30,465 | INFO     | 
[2026-03-01 11:01:19] 2026-03-01 16:00:30,466 | INFO     | architecture information:
[2026-03-01 11:01:19] 2026-03-01 16:00:30,466 | INFO     | executing command: cat /etc/os-release
[2026-03-01 11:01:19] 2026-03-01 16:00:30,477 | INFO     | cat /etc/os-release:
[2026-03-01 11:01:19] NAME="CentOS Linux"
[2026-03-01 11:01:19] VERSION="7 (Core)"
[2026-03-01 11:01:19] ID="centos"
[2026-03-01 11:01:19] ID_LIKE="rhel fedora"
[2026-03-01 11:01:19] VERSION_ID="7"
[2026-03-01 11:01:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 11:01:19] ANSI_COLOR="0;31"
[2026-03-01 11:01:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 11:01:19] HOME_URL="https://www.centos.org/"
[2026-03-01 11:01:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 11:01:19] 
[2026-03-01 11:01:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 11:01:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 11:01:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 11:01:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 11:01:19] 
[2026-03-01 11:01:19] 2026-03-01 16:00:30,477 | INFO     | **************************************
[2026-03-01 11:01:19] 2026-03-01 16:00:30,980 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-03-01 11:01:19] 2026-03-01 16:00:30,992 | INFO     | sufficient remaining disk space (406695444480 B)
[2026-03-01 11:01:19] 2026-03-01 16:00:30,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | INFO     | update_server=False
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 11:01:19] 2026-03-01 16:00:30,993 | INFO     | aborting loop
[2026-03-01 11:01:19] 2026-03-01 16:00:31,034 | INFO     | all payload control threads have been joined
[2026-03-01 11:01:19] 2026-03-01 16:00:31,998 | INFO     | [job] retrieve thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:31,999 | INFO     | [job] queue monitor thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:31,999 | INFO     | [job] job monitor thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,007 | INFO     | all data control threads have been joined
[2026-03-01 11:01:19] 2026-03-01 16:00:32,040 | INFO     | [payload] control thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,348 | INFO     | [job] validate thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,358 | INFO     | all job control threads have been joined
[2026-03-01 11:01:19] 2026-03-01 16:00:32,458 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,470 | INFO     | [payload] failed_post thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,648 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 11:01:19] 2026-03-01 16:00:32,913 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,918 | INFO     | [data] copytool_in thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:32,999 | INFO     | [data] copytool_out thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:33,009 | INFO     | [data] control thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:33,361 | INFO     | [job] control thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:33,480 | INFO     | [payload] validate_post thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:36,767 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:00:41,826 | INFO     | job.realtimelogging is not enabled
[2026-03-01 11:01:19] 2026-03-01 16:00:42,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 11:01:19] 2026-03-01 16:01:00,890 | INFO     | PID=3822003 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 11:01:19] 2026-03-01 16:01:00,890 | INFO     | .. there are 8 such processes running
[2026-03-01 11:01:19] 2026-03-01 16:01:00,890 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 11:01:19] 2026-03-01 16:01:00,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 11:01:19] 2026-03-01 16:01:00,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 11:01:19] 2026-03-01 16:01:12,199 | INFO     | [monitor] cgroup control has ended
[2026-03-01 11:01:19] 2026-03-01 16:01:13,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129141830440768)>', '<ExcThread(monitor, started 129141185693440)>']
[2026-03-01 11:01:19] 2026-03-01 16:01:13,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 11:01:19] 2026-03-01 16:01:13,948 | INFO     | [monitor] control thread has ended
[2026-03-01 11:01:19] 2026-03-01 16:01:18,936 | INFO     | all workflow threads have been joined
[2026-03-01 11:01:19] 2026-03-01 16:01:18,936 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 11:01:19] 2026-03-01 16:01:18,942 | INFO     | traces error code: 0
[2026-03-01 11:01:19] 2026-03-01 16:01:18,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 11:01:19] 2026-03-01 16:01:19,014 [wrapper] ==== pilot stdout END ====
[2026-03-01 11:01:19] 2026-03-01 16:01:19,016 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 11:01:19] 2026-03-01 16:01:19,018 [wrapper] pilotpid: 3822003
[2026-03-01 11:01:19] 2026-03-01 16:01:19,020 [wrapper] Pilot exit status: 0
[2026-03-01 11:01:19] 2026-03-01 16:01:19,027 [wrapper] pandaids: 7033785463
[2026-03-01 11:01:19] 2026-03-01 16:01:19,061 [wrapper] cleanup supervisor_pilot 3912434 3822004
[2026-03-01 11:01:19] 2026-03-01 16:01:19,063 [wrapper] Test setup, not cleaning
[2026-03-01 11:01:19] 2026-03-01 16:01:19,065 [wrapper] apfmon messages muted
[2026-03-01 11:01:19] 2026-03-01 16:01:19,067 [wrapper] ==== wrapper stdout END ====
[2026-03-01 11:01:19] 2026-03-01 16:01:19,068 [wrapper] ==== wrapper stderr END ====
[2026-03-01 11:01:19]  *** Error codes and diagnostics ***
[2026-03-01 11:01:19]     "exeErrorCode": 0,
[2026-03-01 11:01:19]     "exeErrorDiag": "",
[2026-03-01 11:01:19]     "pilotErrorCode": 0,
[2026-03-01 11:01:19]     "pilotErrorDiag": "",
[2026-03-01 11:01:19]  *** Listing of results directory ***
[2026-03-01 11:01:19] total 337144
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc    584627 Feb 28 13:22 pilot3.tar.gz
[2026-03-01 11:01:19] -rwx------ 1 boinc boinc     36322 Feb 28 13:26 runpilot2-wrapper.sh
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc      5111 Feb 28 13:28 queuedata.json
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc       100 Mar  1 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 11:01:19] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 09:29 run_atlas
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc       105 Mar  1 09:29 job.xml
[2026-03-01 11:01:19] -rw-r--r-- 2 boinc boinc 192029604 Mar  1 09:29 EVNT.48700904._000016.pool.root.1
[2026-03-01 11:01:19] -rw-r--r-- 2 boinc boinc     15845 Mar  1 09:29 start_atlas.sh
[2026-03-01 11:01:19] drwxrwx--x 2 boinc boinc      4096 Mar  1 09:29 shared
[2026-03-01 11:01:19] -rw-r--r-- 2 boinc boinc    597942 Mar  1 09:29 input.tar.gz
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc      6477 Mar  1 09:29 init_data.xml
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc         0 Mar  1 09:29 boinc_setup_complete
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc         0 Mar  1 09:29 boinc_lockfile
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc      2518 Mar  1 09:29 pandaJob.out
[2026-03-01 11:01:19] -rw------- 1 boinc boinc    998198 Mar  1 09:29 agis_schedconf.cvmfs.json
[2026-03-01 11:01:19] -rw------- 1 boinc boinc   1513015 Mar  1 09:29 agis_ddmendpoints.agis.ALL.json
[2026-03-01 11:01:19] -rw------- 1 boinc boinc       424 Mar  1 09:30 workernode_map.json
[2026-03-01 11:01:19] drwx------ 5 boinc boinc      4096 Mar  1 09:30 pilot3
[2026-03-01 11:01:19] -rw------- 1 boinc boinc 147096086 Mar  1 11:00 HITS.48700906._000396.pool.root.1
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc       529 Mar  1 11:00 boinc_task_state.xml
[2026-03-01 11:01:19] -rw------- 1 boinc boinc      1025 Mar  1 11:00 memory_monitor_summary.json
[2026-03-01 11:01:19] -rw------- 1 boinc boinc    285495 Mar  1 11:00 log.48700906._000396.job.log.tgz.1
[2026-03-01 11:01:19] -rw------- 1 boinc boinc      6285 Mar  1 11:00 heartbeat.json
[2026-03-01 11:01:19] -rw------- 1 boinc boinc        95 Mar  1 11:01 pilot_heartbeat.json
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc      8192 Mar  1 11:01 boinc_mmap_file
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc        27 Mar  1 11:01 wrapper_checkpoint.txt
[2026-03-01 11:01:19] -rw------- 1 boinc boinc      4899 Mar  1 11:01 pilotlog.txt
[2026-03-01 11:01:19] -rw------- 1 boinc boinc    804184 Mar  1 11:01 log.48700906._000396.job.log.1
[2026-03-01 11:01:19] -rw------- 1 boinc boinc       357 Mar  1 11:01 output.list
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc       620 Mar  1 11:01 runtime_log
[2026-03-01 11:01:19] -rw------- 1 boinc boinc   1105920 Mar  1 11:01 result.tar.gz
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc      8891 Mar  1 11:01 runtime_log.err
[2026-03-01 11:01:19] -rw------- 1 boinc boinc       643 Mar  1 11:01 LNkNDmTCeG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMB6KDm9tD1Gn.diag
[2026-03-01 11:01:19] -rw-r--r-- 1 boinc boinc     21562 Mar  1 11:01 stderr.txt
[2026-03-01 11:01:19] HITS file was successfully produced:
[2026-03-01 11:01:19] -rw------- 1 boinc boinc 147096086 Mar  1 11:00 shared/HITS.pool.root.1
[2026-03-01 11:01:19]  *** Contents of shared directory: ***
[2026-03-01 11:01:19] total 332872
[2026-03-01 11:01:19] -rw-r--r-- 2 boinc boinc 192029604 Mar  1 09:29 ATLAS.root_0
[2026-03-01 11:01:19] -rw-r--r-- 2 boinc boinc     15845 Mar  1 09:29 start_atlas.sh
[2026-03-01 11:01:19] -rw-r--r-- 2 boinc boinc    597942 Mar  1 09:29 input.tar.gz
[2026-03-01 11:01:19] -rw------- 1 boinc boinc 147096086 Mar  1 11:00 HITS.pool.root.1
[2026-03-01 11:01:19] -rw------- 1 boinc boinc   1105920 Mar  1 11:01 result.tar.gz
11:01:20 (3817820): run_atlas exited; CPU time 20901.205144
11:01:20 (3817820): called boinc_finish(0)

</stderr_txt>
]]>

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