Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:12:53 (5494): wrapper (7.7.26015): starting
10:12:53 (5494): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 10:12:53] Arguments: --nthreads 8
[2026-03-01 10:12:53] Threads: 8
[2026-03-01 10:12:53] Checking for CVMFS
[2026-03-01 10:12:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 10:12:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 10:12:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 10:12:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 10:12:57] 2.11.2.0 20308 108659 135552 156763 3 56 16565283 25165824 899 130560 160 35444758 99.827 26024859 854 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-01 10:12:57] CVMFS is ok
[2026-03-01 10:12:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 10:12:57] Checking for apptainer binary...
[2026-03-01 10:12:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 10:12:57] Running /usr/bin/apptainer --version
[2026-03-01 10:12:57] apptainer version 1.3.2-1.el7
[2026-03-01 10:12:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 10:13:03] cg-vwn476.simple-grid.lan
[2026-03-01 10:13:03] apptainer works
[2026-03-01 10:13:03] Set ATHENA_PROC_NUMBER=8
[2026-03-01 10:13:03] Set ATHENA_CORE_NUMBER=8
[2026-03-01 10:13:03] Starting ATLAS job with PandaID=7033785096
[2026-03-01 10:13:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 14:27:01]  *** The last 200 lines of the pilot log: ***
[2026-03-01 14:27:01] 2026-03-01 13:26:18,483 | INFO     | log transfer has been attempted: DONE
[2026-03-01 14:27:01] 2026-03-01 13:26:18,483 | INFO     | job 7033785096 has finished - writing final server update
[2026-03-01 14:27:01] 2026-03-01 13:26:18,483 | INFO     | total number of processed events: 400 (read)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,485 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7033785096/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,486 | INFO     | extracted standard info from prmon json
[2026-03-01 14:27:01] 2026-03-01 13:26:18,486 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 14:27:01] 2026-03-01 13:26:18,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 14:27:01] 2026-03-01 13:26:18,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 14:27:01] 2026-03-01 13:26:18,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 14:27:01] 2026-03-01 13:26:18,491 | INFO     | fitting pss+swap vs Time
[2026-03-01 14:27:01] 2026-03-01 13:26:18,492 | INFO     | sum of square deviations: 4180243959.5
[2026-03-01 14:27:01] 2026-03-01 13:26:18,494 | INFO     | sum of deviations: 84981410863.00005
[2026-03-01 14:27:01] 2026-03-01 13:26:18,494 | INFO     | mean x: 1772364281.5
[2026-03-01 14:27:01] 2026-03-01 13:26:18,494 | INFO     | mean y: 2464507.7983193276
[2026-03-01 14:27:01] 2026-03-01 13:26:18,494 | INFO     | intersect: -36028451071.36631
[2026-03-01 14:27:01] 2026-03-01 13:26:18,495 | INFO     | chi2: 8.36759288490536
[2026-03-01 14:27:01] 2026-03-01 13:26:18,495 | INFO     | sum of square deviations: 3922276332.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,497 | INFO     | sum of deviations: 99039322327.99998
[2026-03-01 14:27:01] 2026-03-01 13:26:18,497 | INFO     | mean x: 1772364129.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,497 | INFO     | mean y: 2472657.8068669527
[2026-03-01 14:27:01] 2026-03-01 13:26:18,497 | INFO     | intersect: -44750555277.14994
[2026-03-01 14:27:01] 2026-03-01 13:26:18,498 | INFO     | chi2: 7.67502915055366
[2026-03-01 14:27:01] 2026-03-01 13:26:18,498 | INFO     | current chi2=7.67502915055366 (change=8.276737932614337 %)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,498 | INFO     | right removable region: 232
[2026-03-01 14:27:01] 2026-03-01 13:26:18,499 | INFO     | sum of square deviations: 3922276332.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,500 | INFO     | sum of deviations: 2053836755.0000076
[2026-03-01 14:27:01] 2026-03-01 13:26:18,501 | INFO     | mean x: 1772364434.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,501 | INFO     | mean y: 2513499.862660944
[2026-03-01 14:27:01] 2026-03-01 13:26:18,501 | INFO     | intersect: -925556556.8301181
[2026-03-01 14:27:01] 2026-03-01 13:26:18,501 | INFO     | chi2: 3.4049333269213733
[2026-03-01 14:27:01] 2026-03-01 13:26:18,501 | INFO     | current chi2=3.4049333269213733 (change=59.30809046573393 %)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,502 | INFO     | sum of square deviations: 3675146117.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,504 | INFO     | sum of deviations: -55217995836.50001
[2026-03-01 14:27:01] 2026-03-01 13:26:18,504 | INFO     | mean x: 1772364586.5
[2026-03-01 14:27:01] 2026-03-01 13:26:18,504 | INFO     | mean y: 2548748.4692982454
[2026-03-01 14:27:01] 2026-03-01 13:26:18,504 | INFO     | intersect: 26631808441.143734
[2026-03-01 14:27:01] 2026-03-01 13:26:18,504 | INFO     | chi2: 1.073169608670503
[2026-03-01 14:27:01] 2026-03-01 13:26:18,504 | INFO     | current chi2=1.073169608670503 (change=68.48192003686525 %)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,505 | INFO     | sum of square deviations: 3438620752.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,507 | INFO     | sum of deviations: -61662319578.00001
[2026-03-01 14:27:01] 2026-03-01 13:26:18,507 | INFO     | mean x: 1772364739.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,507 | INFO     | mean y: 2552848.004484305
[2026-03-01 14:27:01] 2026-03-01 13:26:18,507 | INFO     | intersect: 31785098475.181164
[2026-03-01 14:27:01] 2026-03-01 13:26:18,507 | INFO     | chi2: 0.9860340714455249
[2026-03-01 14:27:01] 2026-03-01 13:26:18,508 | INFO     | current chi2=0.9860340714455249 (change=8.119456283608883 %)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,508 | INFO     | left removable region: 30
[2026-03-01 14:27:01] 2026-03-01 13:26:18,508 | INFO     | sum of square deviations: 2555770710.5
[2026-03-01 14:27:01] 2026-03-01 13:26:18,509 | INFO     | sum of deviations: -24796208969.0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,510 | INFO     | mean x: 1772365013.5
[2026-03-01 14:27:01] 2026-03-01 13:26:18,510 | INFO     | mean y: 2548348.297029703
[2026-03-01 14:27:01] 2026-03-01 13:26:18,510 | INFO     | intersect: 17198117991.355003
[2026-03-01 14:27:01] 2026-03-01 13:26:18,510 | INFO     | chi2: 0.15160607271675297
[2026-03-01 14:27:01] 2026-03-01 13:26:18,510 | INFO     | current memory leak: -9.70 B/s (using 202 data points, chi2=0.15)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,511 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,511 | INFO     | ..............................
[2026-03-01 14:27:01] 2026-03-01 13:26:18,511 | INFO     | . Timing measurements:
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . get job = 0 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . initial setup = 117 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . payload setup = 160 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . stage-in = 0 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . payload execution = 14638 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . stage-out = 4 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | . log creation = 1 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,512 | INFO     | ..............................
[2026-03-01 14:27:01] 2026-03-01 13:26:18,860 | INFO     | 
[2026-03-01 14:27:01] 2026-03-01 13:26:18,860 | INFO     | job summary report
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | --------------------------------------------------
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | PanDA job id: 7033785096
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | task id: 48844040
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | errors: (none)
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | pilot state: finished 
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | transexitcode: 0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | exeerrorcode: 0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | exeerrordiag: 
[2026-03-01 14:27:01] 2026-03-01 13:26:18,861 | INFO     | exitcode: 0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | exitmsg: OK
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | cpuconsumptiontime: 66484 s
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | nevents: 400
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | neventsw: 0
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | pid: 13902
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | pgrp: 13902
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | corecount: 8
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | event service: False
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | sizes: {0: 2281932, 1: 2282393, 14803: 2313373, 14809: 2322373, 14811: 2322429, 14813: 2322623}
[2026-03-01 14:27:01] 2026-03-01 13:26:18,862 | INFO     | --------------------------------------------------
[2026-03-01 14:27:01] 2026-03-01 13:26:18,863 | INFO     | 
[2026-03-01 14:27:01] 2026-03-01 13:26:18,863 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,360 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 14:27:01] 2026-03-01 13:26:19,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,360 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 14:27:01] 2026-03-01 13:26:19,360 | INFO     | job 7033785096 has completed (purged errors)
[2026-03-01 14:27:01] 2026-03-01 13:26:19,360 | INFO     | overall cleanup function is called
[2026-03-01 14:27:01] 2026-03-01 13:26:20,369 | INFO     | --- collectZombieJob: --- 10, [13902]
[2026-03-01 14:27:01] 2026-03-01 13:26:20,369 | INFO     | zombie collector waiting for pid 13902
[2026-03-01 14:27:01] 2026-03-01 13:26:20,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 14:27:01] 2026-03-01 13:26:20,370 | INFO     | collected zombie processes
[2026-03-01 14:27:01] 2026-03-01 13:26:20,370 | INFO     | will attempt to kill all subprocesses of pid=13902
[2026-03-01 14:27:01] 2026-03-01 13:26:20,452 | INFO     | process IDs to be killed: [13902] (in reverse order)
[2026-03-01 14:27:01] 2026-03-01 13:26:21,497 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 14:27:01] 2026-03-01 13:26:21,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 14:27:01] 2026-03-01 13:26:21,499 | INFO     | did not find any defunct processes belonging to 13902
[2026-03-01 14:27:01] 2026-03-01 13:26:21,501 | INFO     | did not find any defunct processes belonging to 13902
[2026-03-01 14:27:01] 2026-03-01 13:26:21,501 | INFO     | ready for new job
[2026-03-01 14:27:01] 2026-03-01 13:26:21,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 14:27:01] 2026-03-01 13:26:21,503 | INFO     | **************************************
[2026-03-01 14:27:01] 2026-03-01 13:26:21,503 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 14:27:01] 2026-03-01 13:26:21,503 | INFO     | **************************************
[2026-03-01 14:27:01] 2026-03-01 13:26:21,503 | INFO     | 
[2026-03-01 14:27:01] 2026-03-01 13:26:21,504 | INFO     | pilot is running in a VM
[2026-03-01 14:27:01] 2026-03-01 13:26:21,504 | INFO     | architecture information:
[2026-03-01 14:27:01] 2026-03-01 13:26:21,510 | INFO     | executing command: cat /etc/os-release
[2026-03-01 14:27:01] 2026-03-01 13:26:21,821 | INFO     | cat /etc/os-release:
[2026-03-01 14:27:01] NAME="CentOS Linux"
[2026-03-01 14:27:01] VERSION="7 (Core)"
[2026-03-01 14:27:01] ID="centos"
[2026-03-01 14:27:01] ID_LIKE="rhel fedora"
[2026-03-01 14:27:01] VERSION_ID="7"
[2026-03-01 14:27:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 14:27:01] ANSI_COLOR="0;31"
[2026-03-01 14:27:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 14:27:01] HOME_URL="https://www.centos.org/"
[2026-03-01 14:27:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 14:27:01] 
[2026-03-01 14:27:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 14:27:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 14:27:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 14:27:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 14:27:01] 
[2026-03-01 14:27:01] 2026-03-01 13:26:21,821 | INFO     | **************************************
[2026-03-01 14:27:01] 2026-03-01 13:26:22,324 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-01 14:27:01] 2026-03-01 13:26:22,567 | INFO     | sufficient remaining disk space (497731764224 B)
[2026-03-01 14:27:01] 2026-03-01 13:26:22,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 14:27:01] 2026-03-01 13:26:22,567 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 14:27:01] 2026-03-01 13:26:22,567 | INFO     | update_server=False
[2026-03-01 14:27:01] 2026-03-01 13:26:22,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 14:27:01] 2026-03-01 13:26:22,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 14:27:01] 2026-03-01 13:26:22,771 | INFO     | all payload control threads have been joined
[2026-03-01 14:27:01] 2026-03-01 13:26:23,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 14:27:01] 2026-03-01 13:26:23,080 | INFO     | aborting loop
[2026-03-01 14:27:01] 2026-03-01 13:26:23,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 14:27:01] 2026-03-01 13:26:23,457 | INFO     | all job control threads have been joined
[2026-03-01 14:27:01] 2026-03-01 13:26:23,465 | INFO     | all data control threads have been joined
[2026-03-01 14:27:01] 2026-03-01 13:26:23,573 | INFO     | [job] retrieve thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:23,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 14:27:01] 2026-03-01 13:26:23,684 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:23,777 | INFO     | [payload] control thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,086 | INFO     | [job] job monitor thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,277 | INFO     | [data] copytool_in thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,463 | INFO     | [job] control thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,471 | INFO     | [data] control thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,506 | INFO     | [payload] failed_post thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,516 | INFO     | [payload] validate_post thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,575 | INFO     | [data] copytool_out thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,646 | INFO     | [job] validate thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,658 | INFO     | [job] queue monitor thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,832 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:24,898 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:25,038 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:27,348 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 14:27:01] 2026-03-01 13:26:49,742 | INFO     | [monitor] cgroup control has ended
[2026-03-01 14:27:01] 2026-03-01 13:26:50,766 | INFO     | PID=9460 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-01 14:27:01] 2026-03-01 13:26:50,766 | INFO     | .. there are 2 such processes running
[2026-03-01 14:27:01] 2026-03-01 13:26:50,766 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 14:27:01] 2026-03-01 13:26:50,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 14:27:01] 2026-03-01 13:26:50,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 14:27:01] 2026-03-01 13:26:51,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837045626688)>', '<ExcThread(monitor, started 139836459566848)>']
[2026-03-01 14:27:01] 2026-03-01 13:26:51,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 14:27:01] 2026-03-01 13:26:51,772 | INFO     | [monitor] control thread has ended
[2026-03-01 14:27:01] 2026-03-01 13:26:56,716 | INFO     | all workflow threads have been joined
[2026-03-01 14:27:01] 2026-03-01 13:26:56,716 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 14:27:01] 2026-03-01 13:26:56,717 | INFO     | traces error code: 0
[2026-03-01 14:27:01] 2026-03-01 13:26:56,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 14:27:01] 2026-03-01 13:26:57,198 [wrapper] ==== pilot stdout END ====
[2026-03-01 14:27:01] 2026-03-01 13:26:57,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 14:27:01] 2026-03-01 13:26:57,347 [wrapper] pilotpid: 9460
[2026-03-01 14:27:01] 2026-03-01 13:26:57,459 [wrapper] Pilot exit status: 0
[2026-03-01 14:27:01] 2026-03-01 13:26:57,879 [wrapper] pandaids: 7033785096
[2026-03-01 14:27:01] 2026-03-01 13:26:58,778 [wrapper] cleanup supervisor_pilot  6704 9461
[2026-03-01 14:27:01] 2026-03-01 13:26:58,837 [wrapper] Test setup, not cleaning
[2026-03-01 14:27:01] 2026-03-01 13:26:58,925 [wrapper] apfmon messages muted
[2026-03-01 14:27:01] 2026-03-01 13:26:59,037 [wrapper] ==== wrapper stdout END ====
[2026-03-01 14:27:01] 2026-03-01 13:26:59,166 [wrapper] ==== wrapper stderr END ====
[2026-03-01 14:27:01]  *** Error codes and diagnostics ***
[2026-03-01 14:27:01]     "exeErrorCode": 0,
[2026-03-01 14:27:01]     "exeErrorDiag": "",
[2026-03-01 14:27:01]     "pilotErrorCode": 0,
[2026-03-01 14:27:01]     "pilotErrorDiag": "",
[2026-03-01 14:27:01]  *** Listing of results directory ***
[2026-03-01 14:27:01] total 459832
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc    584627 Feb 28 19:22 pilot3.tar.gz
[2026-03-01 14:27:01] -rwx------. 1 boinc boinc     36322 Feb 28 19:26 runpilot2-wrapper.sh
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc      5111 Feb 28 19:28 queuedata.json
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc       100 Mar  1 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 14:27:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 10:12 run_atlas
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc       105 Mar  1 10:12 job.xml
[2026-03-01 14:27:01] -rw-r--r--. 2 boinc boinc 256818062 Mar  1 10:12 EVNT.48452373._000003.pool.root.1
[2026-03-01 14:27:01] -rw-r--r--. 2 boinc boinc    597984 Mar  1 10:12 input.tar.gz
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc      6392 Mar  1 10:12 init_data.xml
[2026-03-01 14:27:01] -rw-r--r--. 2 boinc boinc     15845 Mar  1 10:12 start_atlas.sh
[2026-03-01 14:27:01] drwxrwx--x. 2 boinc boinc        68 Mar  1 10:12 shared
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc         0 Mar  1 10:12 boinc_lockfile
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc      2634 Mar  1 10:13 pandaJob.out
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc       415 Mar  1 10:19 workernode_map.json
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc    998198 Mar  1 10:19 agis_schedconf.cvmfs.json
[2026-03-01 14:27:01] drwx------. 5 boinc boinc      4096 Mar  1 10:19 pilot3
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc 205028288 Mar  1 14:24 HITS.48844040._000058.pool.root.1
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc       531 Mar  1 14:25 boinc_task_state.xml
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc        95 Mar  1 14:25 pilot_heartbeat.json
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc      1021 Mar  1 14:26 memory_monitor_summary.json
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc   1513015 Mar  1 14:26 agis_ddmendpoints.agis.ALL.json
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc    462904 Mar  1 14:26 log.48844040._000058.job.log.tgz.1
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc      6319 Mar  1 14:26 heartbeat.json
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc        28 Mar  1 14:26 wrapper_checkpoint.txt
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc      4880 Mar  1 14:26 pilotlog.txt
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc   2090531 Mar  1 14:26 log.48844040._000058.job.log.1
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc       357 Mar  1 14:27 output.list
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc       620 Mar  1 14:27 runtime_log
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc   2570240 Mar  1 14:27 result.tar.gz
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc      8832 Mar  1 14:27 runtime_log.err
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc       656 Mar  1 14:27 QH6LDmcCeG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHD6KDmXlVIgm.diag
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc      8192 Mar  1 14:27 boinc_mmap_file
[2026-03-01 14:27:01] -rw-r--r--. 1 boinc boinc     20682 Mar  1 14:27 stderr.txt
[2026-03-01 14:27:01] HITS file was successfully produced:
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc 205028288 Mar  1 14:24 shared/HITS.pool.root.1
[2026-03-01 14:27:01]  *** Contents of shared directory: ***
[2026-03-01 14:27:01] total 454136
[2026-03-01 14:27:01] -rw-r--r--. 2 boinc boinc 256818062 Mar  1 10:12 ATLAS.root_0
[2026-03-01 14:27:01] -rw-r--r--. 2 boinc boinc    597984 Mar  1 10:12 input.tar.gz
[2026-03-01 14:27:01] -rw-r--r--. 2 boinc boinc     15845 Mar  1 10:12 start_atlas.sh
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc 205028288 Mar  1 14:24 HITS.pool.root.1
[2026-03-01 14:27:01] -rw-------. 1 boinc boinc   2570240 Mar  1 14:27 result.tar.gz
14:27:03 (5494): run_atlas exited; CPU time 66619.042863
14:27:03 (5494): called boinc_finish(0)

</stderr_txt>
]]>

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