Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:52 (812225): wrapper (7.7.26015): starting
18:22:52 (812225): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 18:22:52] Arguments: --nthreads 8
[2026-02-28 18:22:52] Threads: 8
[2026-02-28 18:22:52] Checking for CVMFS
[2026-02-28 18:22:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 18:22:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 18:22:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 18:22:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 18:22:53] 2.13.3.0 11596 47994 344572 156750 1 152 36232371 40960000 23059 16776704 0 46105404 99.517 61264547 11428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-28 18:22:53] CVMFS is ok
[2026-02-28 18:22:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 18:22:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 18:22:53] Further information can be found at the LHC@home message board.
[2026-02-28 18:22:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 18:22:53] Checking for apptainer binary...
[2026-02-28 18:22:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 18:22:53] Running /usr/bin/apptainer --version
[2026-02-28 18:22:53] apptainer version 1.4.5-2.el9
[2026-02-28 18:22:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 18:22:54] c7-10-13.aglt2.org
[2026-02-28 18:22:54] apptainer works
[2026-02-28 18:22:54] Set ATHENA_PROC_NUMBER=8
[2026-02-28 18:22:54] Set ATHENA_CORE_NUMBER=8
[2026-02-28 18:22:54] Starting ATLAS job with PandaID=7033785077
[2026-02-28 18:22:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 19:04:22]  *** The last 200 lines of the pilot log: ***
[2026-03-01 19:04:22] 2026-03-02 00:03:12,646 | INFO     | preparing for final server update for job 7033785077 in state='finished'
[2026-03-01 19:04:22] 2026-03-02 00:03:12,646 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7033785077/jobReport.json
[2026-03-01 19:04:22] 2026-03-02 00:03:12,663 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-01 19:04:22] 2026-03-02 00:03:12,685 | INFO     | this job has now completed (state=finished)
[2026-03-01 19:04:22] 2026-03-02 00:03:12,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 19:04:22] 2026-03-02 00:03:12,685 | INFO     | log transfer has been attempted: DONE
[2026-03-01 19:04:22] 2026-03-02 00:03:12,685 | INFO     | job 7033785077 has finished - writing final server update
[2026-03-01 19:04:22] 2026-03-02 00:03:12,686 | INFO     | total number of processed events: 400 (read)
[2026-03-01 19:04:22] 2026-03-02 00:03:12,864 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7033785077/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 19:04:22] 2026-03-02 00:03:12,865 | INFO     | extracted standard info from prmon json
[2026-03-01 19:04:22] 2026-03-02 00:03:12,866 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 19:04:22] 2026-03-02 00:03:12,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 19:04:22] 2026-03-02 00:03:12,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 19:04:22] 2026-03-02 00:03:12,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 19:04:22] 2026-03-02 00:03:13,131 | INFO     | fitting pss+swap vs Time
[2026-03-01 19:04:22] 2026-03-02 00:03:13,136 | INFO     | sum of square deviations: 951199076809.9188
[2026-03-01 19:04:22] 2026-03-02 00:03:13,142 | INFO     | monitor loop #4456: job 0:7033785077 is in state 'finished'
[2026-03-01 19:04:22] 2026-03-02 00:03:13,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 19:04:22] 2026-03-02 00:03:13,611 | INFO     | sum of deviations: 2385361390498.413
[2026-03-01 19:04:22] 2026-03-02 00:03:13,612 | INFO     | mean x: 1772365437.9353063
[2026-03-01 19:04:22] 2026-03-02 00:03:13,612 | INFO     | mean y: 2481080.1108052307
[2026-03-01 19:04:22] 2026-03-02 00:03:13,612 | INFO     | intersect: -4442153264.661096
[2026-03-01 19:04:22] 2026-03-02 00:03:13,617 | INFO     | chi2: 14.10730220007489
[2026-03-01 19:04:22] 2026-03-02 00:03:13,621 | INFO     | sum of square deviations: 941413484560.5314
[2026-03-01 19:04:22] 2026-03-02 00:03:14,210 | INFO     | time since job start (88724s) is within the limit (349056.0s)
[2026-03-01 19:04:22] 2026-03-02 00:03:14,248 | INFO     | sum of deviations: 2842654920474.5366
[2026-03-01 19:04:22] 2026-03-02 00:03:14,248 | INFO     | mean x: 1772365285.438536
[2026-03-01 19:04:22] 2026-03-02 00:03:14,248 | INFO     | mean y: 2488206.517265193
[2026-03-01 19:04:22] 2026-03-02 00:03:14,249 | INFO     | intersect: -5349275903.683517
[2026-03-01 19:04:22] 2026-03-02 00:03:14,254 | INFO     | chi2: 10.60361142614332
[2026-03-01 19:04:22] 2026-03-02 00:03:14,254 | INFO     | current chi2=10.60361142614332 (change=24.83600850283742 %)
[2026-03-01 19:04:22] 2026-03-02 00:03:14,254 | INFO     | right removable region: 1447
[2026-03-01 19:04:22] 2026-03-02 00:03:14,258 | INFO     | sum of square deviations: 941412655570.5294
[2026-03-01 19:04:22] 2026-03-02 00:03:14,434 | INFO     | sum of deviations: 1919059983259.9644
[2026-03-01 19:04:22] 2026-03-02 00:03:14,434 | INFO     | mean x: 1772365590.438536
[2026-03-01 19:04:22] 2026-03-02 00:03:14,434 | INFO     | mean y: 2488344.8142265193
[2026-03-01 19:04:22] 2026-03-02 00:03:14,435 | INFO     | intersect: -3610460620.9676495
[2026-03-01 19:04:22] 2026-03-02 00:03:14,440 | INFO     | chi2: 10.395736190697265
[2026-03-01 19:04:22] 2026-03-02 00:03:14,440 | INFO     | current chi2=10.395736190697265 (change=26.309537831818204 %)
[2026-03-01 19:04:22] 2026-03-02 00:03:14,444 | INFO     | sum of square deviations: 931693584431.1095
[2026-03-01 19:04:22] 2026-03-02 00:03:14,657 | INFO     | sum of deviations: 1555126550885.4246
[2026-03-01 19:04:22] 2026-03-02 00:03:14,659 | INFO     | mean x: 1772365742.941788
[2026-03-01 19:04:22] 2026-03-02 00:03:14,659 | INFO     | mean y: 2494054.9216909218
[2026-03-01 19:04:22] 2026-03-02 00:03:14,659 | INFO     | intersect: -2955831590.7480807
[2026-03-01 19:04:22] 2026-03-02 00:03:14,664 | INFO     | chi2: 8.235135778785136
[2026-03-01 19:04:22] 2026-03-02 00:03:14,664 | INFO     | current chi2=8.235135778785136 (change=20.783524824779278 %)
[2026-03-01 19:04:22] 2026-03-02 00:03:14,665 | INFO     | left removable region: 20
[2026-03-01 19:04:22] 2026-03-02 00:03:14,669 | INFO     | sum of square deviations: 901043610062.5662
[2026-03-01 19:04:22] 2026-03-02 00:03:15,046 | INFO     | sum of deviations: 1547125429551.2832
[2026-03-01 19:04:22] 2026-03-02 00:03:15,046 | INFO     | mean x: 1772365864.950946
[2026-03-01 19:04:22] 2026-03-02 00:03:15,047 | INFO     | mean y: 2511886.97547302
[2026-03-01 19:04:22] 2026-03-02 00:03:15,047 | INFO     | intersect: -3040706298.59477
[2026-03-01 19:04:22] 2026-03-02 00:03:15,052 | INFO     | chi2: 1.2550112207109947
[2026-03-01 19:04:22] 2026-03-02 00:03:15,052 | INFO     | current memory leak: 1.72 B/s (using 1427 data points, chi2=1.26)
[2026-03-01 19:04:22] 2026-03-02 00:03:15,056 | INFO     | could have reported an average CPU frequency of 3293 MHz (52 samples)
[2026-03-01 19:04:22] 2026-03-02 00:03:15,057 | INFO     | ..............................
[2026-03-01 19:04:22] 2026-03-02 00:03:15,057 | INFO     | . Timing measurements:
[2026-03-01 19:04:22] 2026-03-02 00:03:15,057 | INFO     | . get job = 0 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,057 | INFO     | . initial setup = 37 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,057 | INFO     | . payload setup = 39 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,057 | INFO     | . stage-in = 1 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,058 | INFO     | . payload execution = 88635 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,058 | INFO     | . stage-out = 18 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,058 | INFO     | . log creation = 2 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,058 | INFO     | ..............................
[2026-03-01 19:04:22] 2026-03-02 00:03:15,842 | INFO     | 
[2026-03-01 19:04:22] 2026-03-02 00:03:15,843 | INFO     | job summary report
[2026-03-01 19:04:22] 2026-03-02 00:03:15,843 | INFO     | --------------------------------------------------
[2026-03-01 19:04:22] 2026-03-02 00:03:15,843 | INFO     | PanDA job id: 7033785077
[2026-03-01 19:04:22] 2026-03-02 00:03:15,843 | INFO     | task id: 48844040
[2026-03-01 19:04:22] 2026-03-02 00:03:15,843 | INFO     | errors: (none)
[2026-03-01 19:04:22] 2026-03-02 00:03:15,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 19:04:22] 2026-03-02 00:03:15,844 | INFO     | pilot state: finished 
[2026-03-01 19:04:22] 2026-03-02 00:03:15,844 | INFO     | transexitcode: 0
[2026-03-01 19:04:22] 2026-03-02 00:03:15,844 | INFO     | exeerrorcode: 0
[2026-03-01 19:04:22] 2026-03-02 00:03:15,844 | INFO     | exeerrordiag: 
[2026-03-01 19:04:22] 2026-03-02 00:03:15,844 | INFO     | exitcode: 0
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | exitmsg: OK
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | cpuconsumptiontime: 132341 s
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | nevents: 400
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | neventsw: 0
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | pid: 822772
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | pgrp: 822772
[2026-03-01 19:04:22] 2026-03-02 00:03:15,845 | INFO     | corecount: 8
[2026-03-01 19:04:22] 2026-03-02 00:03:15,846 | INFO     | event service: False
[2026-03-01 19:04:22] 2026-03-02 00:03:15,846 | INFO     | sizes: {0: 2281875, 1: 2281931, 3: 2281987, 4: 2281987, 5: 2248380, 6: 2282604, 18: 2282632, 88680: 2346377, 88701: 2355375, 88703: 2355431, 88707: 2355625}
[2026-03-01 19:04:22] 2026-03-02 00:03:15,846 | INFO     | --------------------------------------------------
[2026-03-01 19:04:22] 2026-03-02 00:03:15,846 | INFO     | 
[2026-03-01 19:04:22] 2026-03-02 00:03:15,863 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-01 19:04:22] 2026-03-02 00:03:16,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,200 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,200 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,200 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 19:04:22] 2026-03-02 00:03:16,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,201 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 19:04:22] 2026-03-02 00:03:16,201 | INFO     | job 7033785077 has completed (purged errors)
[2026-03-01 19:04:22] 2026-03-02 00:03:16,201 | INFO     | overall cleanup function is called
[2026-03-01 19:04:22] 2026-03-02 00:03:17,284 | INFO     | --- collectZombieJob: --- 10, [822772]
[2026-03-01 19:04:22] 2026-03-02 00:03:17,285 | INFO     | zombie collector waiting for pid 822772
[2026-03-01 19:04:22] 2026-03-02 00:03:17,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 19:04:22] 2026-03-02 00:03:17,285 | INFO     | collected zombie processes
[2026-03-01 19:04:22] 2026-03-02 00:03:17,285 | INFO     | will attempt to kill all subprocesses of pid=822772
[2026-03-01 19:04:22] 2026-03-02 00:03:19,871 | INFO     | process IDs to be killed: [822772] (in reverse order)
[2026-03-01 19:04:22] 2026-03-02 00:03:20,590 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 19:04:22] 2026-03-02 00:03:20,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 19:04:22] 2026-03-02 00:03:20,674 | INFO     | did not find any defunct processes belonging to 822772
[2026-03-01 19:04:22] 2026-03-02 00:03:20,702 | INFO     | did not find any defunct processes belonging to 822772
[2026-03-01 19:04:22] 2026-03-02 00:03:20,703 | INFO     | ready for new job
[2026-03-01 19:04:22] 2026-03-02 00:03:20,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 19:04:22] 2026-03-02 00:03:20,762 | INFO     | **************************************
[2026-03-01 19:04:22] 2026-03-02 00:03:20,762 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 19:04:22] 2026-03-02 00:03:20,762 | INFO     | **************************************
[2026-03-01 19:04:22] 2026-03-02 00:03:20,762 | INFO     | 
[2026-03-01 19:04:22] 2026-03-02 00:03:20,880 | INFO     | architecture information:
[2026-03-01 19:04:22] 2026-03-02 00:03:20,885 | INFO     | executing command: cat /etc/os-release
[2026-03-01 19:04:22] 2026-03-02 00:03:21,020 | INFO     | cat /etc/os-release:
[2026-03-01 19:04:22] NAME="CentOS Linux"
[2026-03-01 19:04:22] VERSION="7 (Core)"
[2026-03-01 19:04:22] ID="centos"
[2026-03-01 19:04:22] ID_LIKE="rhel fedora"
[2026-03-01 19:04:22] VERSION_ID="7"
[2026-03-01 19:04:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 19:04:22] ANSI_COLOR="0;31"
[2026-03-01 19:04:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 19:04:22] HOME_URL="https://www.centos.org/"
[2026-03-01 19:04:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 19:04:22] 
[2026-03-01 19:04:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 19:04:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 19:04:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 19:04:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 19:04:22] 
[2026-03-01 19:04:22] 2026-03-02 00:03:21,021 | INFO     | **************************************
[2026-03-01 19:04:22] 2026-03-02 00:03:21,525 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-01 19:04:22] 2026-03-02 00:03:21,755 | INFO     | sufficient remaining disk space (84885372928 B)
[2026-03-01 19:04:22] 2026-03-02 00:03:21,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 19:04:22] 2026-03-02 00:03:21,756 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 19:04:22] 2026-03-02 00:03:21,756 | INFO     | update_server=False
[2026-03-01 19:04:22] 2026-03-02 00:03:21,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 19:04:22] 2026-03-02 00:03:21,757 | INFO     | all data control threads have been joined
[2026-03-01 19:04:22] 2026-03-02 00:03:21,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:04:22] 2026-03-02 00:03:21,763 | INFO     | aborting loop
[2026-03-01 19:04:22] 2026-03-02 00:03:21,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:04:22] 2026-03-02 00:03:22,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 19:04:22] 2026-03-02 00:03:22,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 19:04:22] 2026-03-02 00:03:22,763 | INFO     | [job] retrieve thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:22,772 | INFO     | [job] queue monitor thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:22,774 | INFO     | [data] control thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:22,776 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:22,780 | INFO     | [job] job monitor thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:22,796 | INFO     | [data] copytool_in thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:22,839 | INFO     | all payload control threads have been joined
[2026-03-01 19:04:22] 2026-03-02 00:03:23,317 | INFO     | all job control threads have been joined
[2026-03-01 19:04:22] 2026-03-02 00:03:23,690 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:23,698 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:23,715 | INFO     | [job] validate thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:23,728 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:23,846 | INFO     | [payload] control thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:24,011 | INFO     | [payload] validate_post thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:24,017 | INFO     | [payload] failed_post thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:24,324 | INFO     | [job] control thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:24,483 | INFO     | [data] copytool_out thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:26,115 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 19:04:22] 2026-03-02 00:03:48,796 | INFO     | PID=817060 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 19:04:22] 2026-03-02 00:03:48,796 | INFO     | .. there are 25 such processes running
[2026-03-01 19:04:22] 2026-03-02 00:03:48,796 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 19:04:22] 2026-03-02 00:03:48,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 19:04:22] 2026-03-02 00:03:48,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 19:04:22] 2026-03-02 00:04:13,296 | INFO     | [monitor] cgroup control has ended
[2026-03-01 19:04:22] 2026-03-02 00:04:14,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119406188352)>', '<ExcThread(monitor, started 140118870451968)>']
[2026-03-01 19:04:22] 2026-03-02 00:04:14,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 19:04:22] 2026-03-02 00:04:14,964 | INFO     | [monitor] control thread has ended
[2026-03-01 19:04:22] 2026-03-02 00:04:19,551 | INFO     | all workflow threads have been joined
[2026-03-01 19:04:22] 2026-03-02 00:04:19,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 19:04:22] 2026-03-02 00:04:19,552 | INFO     | traces error code: 0
[2026-03-01 19:04:22] 2026-03-02 00:04:19,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 19:04:22] 2026-03-02 00:04:20,688 [wrapper] ==== pilot stdout END ====
[2026-03-01 19:04:22] 2026-03-02 00:04:20,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 19:04:22] 2026-03-02 00:04:20,777 [wrapper] pilotpid: 817060
[2026-03-01 19:04:22] 2026-03-02 00:04:20,785 [wrapper] Pilot exit status: 0
[2026-03-01 19:04:22] 2026-03-02 00:04:20,945 [wrapper] pandaids: 7033785077
[2026-03-01 19:04:22] 2026-03-02 00:04:21,278 [wrapper] cleanup supervisor_pilot 3085266 817061
[2026-03-01 19:04:22] 2026-03-02 00:04:21,311 [wrapper] Test setup, not cleaning
[2026-03-01 19:04:22] 2026-03-02 00:04:21,376 [wrapper] apfmon messages muted
[2026-03-01 19:04:22] 2026-03-02 00:04:21,423 [wrapper] ==== wrapper stdout END ====
[2026-03-01 19:04:22] 2026-03-02 00:04:21,429 [wrapper] ==== wrapper stderr END ====
[2026-03-01 19:04:22]  *** Error codes and diagnostics ***
[2026-03-01 19:04:22]     "exeErrorCode": 0,
[2026-03-01 19:04:22]     "exeErrorDiag": "",
[2026-03-01 19:04:22]     "pilotErrorCode": 0,
[2026-03-01 19:04:22]     "pilotErrorDiag": "",
[2026-03-01 19:04:22]  *** Listing of results directory ***
[2026-03-01 19:04:22] total 476008
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 13:22 pilot3.tar.gz
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 13:23 queuedata.json
[2026-03-01 19:04:22] -rwx------. 1 boincer umatlas     36322 Feb 28 13:24 runpilot2-wrapper.sh
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas       100 Feb 28 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 19:04:22] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 28 18:22 run_atlas
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas       105 Feb 28 18:22 job.xml
[2026-03-01 19:04:22] -rw-r--r--. 2 boincer umatlas 257496790 Feb 28 18:22 EVNT.48452373._000002.pool.root.1
[2026-03-01 19:04:22] drwxrwx--x. 2 boincer umatlas      4096 Feb 28 18:22 shared
[2026-03-01 19:04:22] -rw-r--r--. 2 boincer umatlas    597977 Feb 28 18:22 input.tar.gz
[2026-03-01 19:04:22] -rw-r--r--. 2 boincer umatlas     15845 Feb 28 18:22 start_atlas.sh
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas         0 Feb 28 18:22 boinc_lockfile
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas      2634 Feb 28 18:22 pandaJob.out
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas        57 Feb 28 18:22 setup.sh.local
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas    998790 Feb 28 18:23 agis_schedconf.cvmfs.json
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas       422 Feb 28 18:24 workernode_map.json
[2026-03-01 19:04:22] drwx------. 5 boincer umatlas      4096 Feb 28 18:24 pilot3
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas 203539379 Mar  1 18:56 HITS.48844040._000039.pool.root.1
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas       532 Mar  1 18:56 boinc_task_state.xml
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas      6910 Mar  1 19:02 init_data.xml
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas      1042 Mar  1 19:02 memory_monitor_summary.json
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas   1513015 Mar  1 19:02 agis_ddmendpoints.agis.ALL.json
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas   1321108 Mar  1 19:03 log.48844040._000039.job.log.tgz.1
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas        95 Mar  1 19:03 pilot_heartbeat.json
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas      6332 Mar  1 19:03 heartbeat.json
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas      4819 Mar  1 19:04 pilotlog.txt
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas      8192 Mar  1 19:04 boinc_mmap_file
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas        29 Mar  1 19:04 wrapper_checkpoint.txt
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas   9910835 Mar  1 19:04 log.48844040._000039.job.log.1
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas       357 Mar  1 19:04 output.list
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas       620 Mar  1 19:04 runtime_log
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas  11253760 Mar  1 19:04 result.tar.gz
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas       664 Mar  1 19:04 FlnMDm79dG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAp7KDm26YrTo.diag
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas      9342 Mar  1 19:04 runtime_log.err
[2026-03-01 19:04:22] -rw-r--r--. 1 boincer umatlas     15907 Mar  1 19:04 stderr.txt
[2026-03-01 19:04:22] HITS file was successfully produced:
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas 203539379 Mar  1 18:56 shared/HITS.pool.root.1
[2026-03-01 19:04:22]  *** Contents of shared directory: ***
[2026-03-01 19:04:22] total 461836
[2026-03-01 19:04:22] -rw-r--r--. 2 boincer umatlas 257496790 Feb 28 18:22 ATLAS.root_0
[2026-03-01 19:04:22] -rw-r--r--. 2 boincer umatlas    597977 Feb 28 18:22 input.tar.gz
[2026-03-01 19:04:22] -rw-r--r--. 2 boincer umatlas     15845 Feb 28 18:22 start_atlas.sh
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas 203539379 Mar  1 18:56 HITS.pool.root.1
[2026-03-01 19:04:22] -rw-------. 1 boincer umatlas  11253760 Mar  1 19:04 result.tar.gz
19:04:24 (812225): run_atlas exited; CPU time 137281.905132
19:04:24 (812225): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN