Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (504642): wrapper (7.7.26015): starting
00:01:53 (504642): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 00:01:53] Arguments: --nthreads 8
[2026-03-01 00:01:53] Threads: 8
[2026-03-01 00:01:53] Checking for CVMFS
[2026-03-01 00:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 00:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 00:01:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 00:01:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 00:01:56] 2.13.3.0 8602 166318 656608 156757 3 47 16474093 21042177 23630 16776704 0 583069146 99.383 897612509 33055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-01 00:01:56] CVMFS is ok
[2026-03-01 00:01:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 00:01:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 00:01:56] Further information can be found at the LHC@home message board.
[2026-03-01 00:01:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 00:01:56] Checking for apptainer binary...
[2026-03-01 00:01:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 00:01:56] Running /usr/bin/apptainer --version
[2026-03-01 00:01:57] apptainer version 1.4.5-2.el9
[2026-03-01 00:01:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 00:01:59] c-16-16.aglt2.org
[2026-03-01 00:01:59] apptainer works
[2026-03-01 00:01:59] Set ATHENA_PROC_NUMBER=8
[2026-03-01 00:01:59] Set ATHENA_CORE_NUMBER=8
[2026-03-01 00:01:59] Starting ATLAS job with PandaID=7033531443
[2026-03-01 00:01:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 21:25:42]  *** The last 200 lines of the pilot log: ***
[2026-03-02 21:25:42] 2026-03-02 20:06:53,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:25:42] 2026-03-02 20:06:54,535 | INFO     | sum of deviations: 2264761555778.4795
[2026-03-02 21:25:42] 2026-03-02 20:06:54,535 | INFO     | mean x: 1772411740.1815813
[2026-03-02 21:25:42] 2026-03-02 20:06:54,536 | INFO     | mean y: 2518612.199826238
[2026-03-02 21:25:42] 2026-03-02 20:06:54,536 | INFO     | intersect: -1058701705.7707157
[2026-03-02 21:25:42] 2026-03-02 20:06:54,569 | INFO     | chi2: 7.87511682138975
[2026-03-02 21:25:42] 2026-03-02 20:06:54,623 | INFO     | sum of square deviations: 3757929342685.8
[2026-03-02 21:25:42] 2026-03-02 20:06:54,705 | INFO     | time since job start (140564s) is within the limit (349056.0s)
[2026-03-02 21:25:42] 2026-03-02 20:06:56,201 | INFO     | monitor loop #4514: job 0:7033531443 is in state 'finished'
[2026-03-02 21:25:42] 2026-03-02 20:06:56,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:25:42] 2026-03-02 20:06:56,890 | INFO     | sum of deviations: 2848190693197.388
[2026-03-02 21:25:42] 2026-03-02 20:06:56,890 | INFO     | mean x: 1772411587.6848063
[2026-03-02 21:25:42] 2026-03-02 20:06:56,891 | INFO     | mean y: 2522228.2546800175
[2026-03-02 21:25:42] 2026-03-02 20:06:56,891 | INFO     | intersect: -1340814947.1460521
[2026-03-02 21:25:42] 2026-03-02 20:06:56,940 | INFO     | chi2: 5.090256421593637
[2026-03-02 21:25:42] 2026-03-02 20:06:56,940 | INFO     | current chi2=5.090256421593637 (change=35.36278207622397 %)
[2026-03-02 21:25:42] 2026-03-02 20:06:57,024 | INFO     | sum of square deviations: 3733442237733.4517
[2026-03-02 21:25:42] 2026-03-02 20:06:58,111 | INFO     | sum of deviations: 2838092509209.6997
[2026-03-02 21:25:42] 2026-03-02 20:06:58,136 | INFO     | mean x: 1772411435.1863003
[2026-03-02 21:25:42] 2026-03-02 20:06:58,136 | INFO     | mean y: 2522165.366055846
[2026-03-02 21:25:42] 2026-03-02 20:06:58,136 | INFO     | intersect: -1344831643.0308018
[2026-03-02 21:25:42] 2026-03-02 20:06:58,153 | INFO     | chi2: 5.090197473510424
[2026-03-02 21:25:42] 2026-03-02 20:06:58,153 | INFO     | current chi2=5.090197473510424 (change=0.0011580572436954842 %)
[2026-03-02 21:25:42] 2026-03-02 20:06:58,153 | INFO     | right removable region: 2291
[2026-03-02 21:25:42] 2026-03-02 20:06:58,169 | INFO     | sum of square deviations: 3757927121551.408
[2026-03-02 21:25:42] 2026-03-02 20:06:58,925 | INFO     | monitor loop #4515: job 0:7033531443 is in state 'finished'
[2026-03-02 21:25:42] 2026-03-02 20:06:58,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:25:42] 2026-03-02 20:07:01,201 | INFO     | sum of deviations: 1522867130977.1885
[2026-03-02 21:25:42] 2026-03-02 20:07:01,206 | INFO     | mean x: 1772411892.6852417
[2026-03-02 21:25:42] 2026-03-02 20:07:01,206 | INFO     | mean y: 2523211.5189377447
[2026-03-02 21:25:42] 2026-03-02 20:07:01,206 | INFO     | intersect: -715731221.4752595
[2026-03-02 21:25:42] 2026-03-02 20:07:01,209 | INFO     | chi2: 4.282493314027784
[2026-03-02 21:25:42] 2026-03-02 20:07:01,209 | INFO     | current chi2=4.282493314027784 (change=45.61993921923768 %)
[2026-03-02 21:25:42] 2026-03-02 20:07:01,313 | INFO     | sum of square deviations: 3733438496530.5723
[2026-03-02 21:25:42] 2026-03-02 20:07:01,888 | INFO     | monitor loop #4516: job 0:7033531443 is in state 'finished'
[2026-03-02 21:25:42] 2026-03-02 20:07:01,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:25:42] 2026-03-02 20:07:04,670 | INFO     | monitor loop #4517: job 0:7033531443 is in state 'finished'
[2026-03-02 21:25:42] 2026-03-02 20:07:04,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:25:42] 2026-03-02 20:07:05,545 | INFO     | sum of deviations: 1151137976129.2363
[2026-03-02 21:25:42] 2026-03-02 20:07:05,577 | INFO     | mean x: 1772412045.1884816
[2026-03-02 21:25:42] 2026-03-02 20:07:05,577 | INFO     | mean y: 2525525.7286212915
[2026-03-02 21:25:42] 2026-03-02 20:07:05,577 | INFO     | intersect: -543965548.5080001
[2026-03-02 21:25:42] 2026-03-02 20:07:05,580 | INFO     | chi2: 3.341550885318738
[2026-03-02 21:25:42] 2026-03-02 20:07:05,580 | INFO     | current chi2=3.341550885318738 (change=21.971836491300152 %)
[2026-03-02 21:25:42] 2026-03-02 20:07:05,628 | INFO     | left removable region: 20
[2026-03-02 21:25:42] 2026-03-02 20:07:05,631 | INFO     | sum of square deviations: 3631752175734.3877
[2026-03-02 21:25:42] 2026-03-02 20:07:06,157 | INFO     | sum of deviations: 1398272753315.335
[2026-03-02 21:25:42] 2026-03-02 20:07:06,157 | INFO     | mean x: 1772412014.6983707
[2026-03-02 21:25:42] 2026-03-02 20:07:06,158 | INFO     | mean y: 2531183.3333333335
[2026-03-02 21:25:42] 2026-03-02 20:07:06,158 | INFO     | intersect: -679870948.7175196
[2026-03-02 21:25:42] 2026-03-02 20:07:06,161 | INFO     | chi2: 0.1830933259678129
[2026-03-02 21:25:42] 2026-03-02 20:07:06,161 | INFO     | current memory leak: 0.39 B/s (using 2271 data points, chi2=0.18)
[2026-03-02 21:25:42] 2026-03-02 20:07:06,163 | INFO     | could have reported an average CPU frequency of 2900 MHz (81 samples)
[2026-03-02 21:25:42] 2026-03-02 20:07:06,163 | INFO     | ..............................
[2026-03-02 21:25:42] 2026-03-02 20:07:06,163 | INFO     | . Timing measurements:
[2026-03-02 21:25:42] 2026-03-02 20:07:06,164 | INFO     | . get job = 1 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,164 | INFO     | . initial setup = 59 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,164 | INFO     | . payload setup = 59 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,164 | INFO     | . stage-in = 0 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,164 | INFO     | . payload execution = 140454 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,168 | INFO     | . stage-out = 28 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,169 | INFO     | . log creation = 8 s
[2026-03-02 21:25:42] 2026-03-02 20:07:06,169 | INFO     | ..............................
[2026-03-02 21:25:42] 2026-03-02 20:07:09,046 | INFO     | 
[2026-03-02 21:25:42] 2026-03-02 20:07:09,046 | INFO     | job summary report
[2026-03-02 21:25:42] 2026-03-02 20:07:09,046 | INFO     | --------------------------------------------------
[2026-03-02 21:25:42] 2026-03-02 20:07:09,046 | INFO     | PanDA job id: 7033531443
[2026-03-02 21:25:42] 2026-03-02 20:07:09,046 | INFO     | task id: 48842404
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | errors: (none)
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | pilot state: finished 
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | transexitcode: 0
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | exeerrorcode: 0
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | exeerrordiag: 
[2026-03-02 21:25:42] 2026-03-02 20:07:09,047 | INFO     | exitcode: 0
[2026-03-02 21:25:42] 2026-03-02 20:07:09,048 | INFO     | exitmsg: OK
[2026-03-02 21:25:42] 2026-03-02 20:07:09,048 | INFO     | cpuconsumptiontime: 77545 s
[2026-03-02 21:25:42] 2026-03-02 20:07:09,048 | INFO     | nevents: 400
[2026-03-02 21:25:42] 2026-03-02 20:07:09,048 | INFO     | neventsw: 0
[2026-03-02 21:25:42] 2026-03-02 20:07:09,048 | INFO     | pid: 530267
[2026-03-02 21:25:42] 2026-03-02 20:07:09,048 | INFO     | pgrp: 530267
[2026-03-02 21:25:42] 2026-03-02 20:07:09,049 | INFO     | corecount: 8
[2026-03-02 21:25:42] 2026-03-02 20:07:09,049 | INFO     | event service: False
[2026-03-02 21:25:42] 2026-03-02 20:07:09,049 | INFO     | sizes: {0: 2281804, 1: 2281888, 2: 2282321, 3: 2282349, 140520: 2361449, 140551: 2370475, 140556: 2370659, 140574: 2370853}
[2026-03-02 21:25:42] 2026-03-02 20:07:09,049 | INFO     | --------------------------------------------------
[2026-03-02 21:25:42] 2026-03-02 20:07:09,049 | INFO     | 
[2026-03-02 21:25:42] 2026-03-02 20:07:09,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-02 21:25:42] 2026-03-02 20:07:09,215 | INFO     | PID=510181 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 21:25:42] 2026-03-02 20:07:09,215 | INFO     | .. there are 43 such processes running
[2026-03-02 21:25:42] 2026-03-02 20:07:09,344 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,344 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,344 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 21:25:42] 2026-03-02 20:07:09,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 21:25:42] 2026-03-02 20:07:09,347 | INFO     | job 7033531443 has completed (purged errors)
[2026-03-02 21:25:42] 2026-03-02 20:07:09,368 | INFO     | overall cleanup function is called
[2026-03-02 21:25:42] 2026-03-02 20:07:10,395 | INFO     | --- collectZombieJob: --- 10, [530267]
[2026-03-02 21:25:42] 2026-03-02 20:07:10,396 | INFO     | zombie collector waiting for pid 530267
[2026-03-02 21:25:42] 2026-03-02 20:07:10,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 21:25:42] 2026-03-02 20:07:10,396 | INFO     | collected zombie processes
[2026-03-02 21:25:42] 2026-03-02 20:07:10,396 | INFO     | will attempt to kill all subprocesses of pid=530267
[2026-03-02 21:25:42] 2026-03-02 20:07:16,047 | INFO     | process IDs to be killed: [530267] (in reverse order)
[2026-03-02 21:25:42] 2026-03-02 20:07:16,458 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 21:25:42] 2026-03-02 20:07:16,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 21:25:42] 2026-03-02 20:07:16,845 | INFO     | did not find any defunct processes belonging to 530267
[2026-03-02 21:25:42] 2026-03-02 20:07:17,196 | INFO     | did not find any defunct processes belonging to 530267
[2026-03-02 21:25:42] 2026-03-02 20:07:17,229 | INFO     | ready for new job
[2026-03-02 21:25:42] 2026-03-02 20:07:17,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 21:25:42] 2026-03-02 20:07:17,252 | INFO     | **************************************
[2026-03-02 21:25:42] 2026-03-02 20:07:17,252 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 21:25:42] 2026-03-02 20:07:17,252 | INFO     | **************************************
[2026-03-02 21:25:42] 2026-03-02 20:07:17,252 | INFO     | 
[2026-03-02 21:25:42] 2026-03-02 20:07:17,254 | INFO     | architecture information:
[2026-03-02 21:25:42] 2026-03-02 20:07:17,270 | INFO     | executing command: cat /etc/os-release
[2026-03-02 21:25:42] 2026-03-02 20:07:17,438 | INFO     | cat /etc/os-release:
[2026-03-02 21:25:42] NAME="CentOS Linux"
[2026-03-02 21:25:42] VERSION="7 (Core)"
[2026-03-02 21:25:42] ID="centos"
[2026-03-02 21:25:42] ID_LIKE="rhel fedora"
[2026-03-02 21:25:42] VERSION_ID="7"
[2026-03-02 21:25:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 21:25:42] ANSI_COLOR="0;31"
[2026-03-02 21:25:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 21:25:42] HOME_URL="https://www.centos.org/"
[2026-03-02 21:25:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 21:25:42] 
[2026-03-02 21:25:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 21:25:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 21:25:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 21:25:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 21:25:42] 
[2026-03-02 21:25:42] 2026-03-02 20:07:17,439 | INFO     | **************************************
[2026-03-02 21:25:42] 2026-03-02 20:07:17,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-02 21:25:42] 2026-03-02 20:07:18,107 | INFO     | sufficient remaining disk space (51306823680 B)
[2026-03-02 21:25:42] 2026-03-02 20:07:18,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 21:25:42] 2026-03-02 20:07:18,133 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 21:25:42] 2026-03-02 20:07:18,133 | INFO     | update_server=False
[2026-03-02 21:25:42] 2026-03-02 20:07:18,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 21:25:42] 2026-03-02 20:07:18,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:25:42] 2026-03-02 20:07:18,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 21:25:42] 2026-03-02 20:07:18,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:25:42] 2026-03-02 20:07:18,740 | INFO     | aborting loop
[2026-03-02 21:25:42] 2026-03-02 20:07:18,956 | INFO     | all data control threads have been joined
[2026-03-02 21:25:42] 2026-03-02 20:07:19,064 | INFO     | all job control threads have been joined
[2026-03-02 21:25:42] 2026-03-02 20:07:19,170 | INFO     | [job] retrieve thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:19,170 | INFO     | [job] queue monitor thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:19,597 | INFO     | all payload control threads have been joined
[2026-03-02 21:25:42] 2026-03-02 20:07:19,746 | INFO     | [job] job monitor thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:19,963 | INFO     | [data] control thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,075 | INFO     | [job] control thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,239 | INFO     | [data] copytool_in thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,240 | INFO     | [data] copytool_out thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,291 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,291 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,292 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,292 | INFO     | [job] validate thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,292 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 21:25:42] 2026-03-02 20:07:20,604 | INFO     | [payload] control thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,663 | INFO     | [payload] failed_post thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:20,717 | INFO     | [payload] validate_post thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:24,419 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 21:25:42] 2026-03-02 20:07:43,008 | INFO     | PID=510181 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 21:25:42] 2026-03-02 20:07:43,009 | INFO     | .. there are 43 such processes running
[2026-03-02 21:25:42] 2026-03-02 20:07:43,009 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 21:25:42] 2026-03-02 20:07:43,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 21:25:42] 2026-03-02 20:07:43,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 21:25:42] 2026-03-02 20:08:09,259 | INFO     | [monitor] cgroup control has ended
[2026-03-02 21:25:42] 2026-03-02 20:08:10,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518486644544)>', '<ExcThread(monitor, started 140517765539584)>']
[2026-03-02 21:25:42] 2026-03-02 20:08:10,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 21:25:42] 2026-03-02 20:08:10,363 | INFO     | [monitor] control thread has ended
[2026-03-02 21:25:42] 2026-03-02 20:08:15,169 | INFO     | all workflow threads have been joined
[2026-03-02 21:25:42] 2026-03-02 20:08:15,169 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 21:25:42] 2026-03-02 20:08:15,169 | INFO     | traces error code: 0
[2026-03-02 21:25:42] 2026-03-02 20:08:15,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 21:25:42] 2026-03-02 20:08:21,169 [wrapper] ==== pilot stdout END ====
[2026-03-02 21:25:42] 2026-03-02 20:08:21,213 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 21:25:42] 2026-03-02 20:08:21,281 [wrapper] pilotpid: 510181
[2026-03-02 21:25:42] 2026-03-02 20:08:21,339 [wrapper] Pilot exit status: 0
[2026-03-02 21:25:42] 2026-03-02 20:08:21,493 [wrapper] pandaids: 7033531443
[2026-03-02 21:25:42] 2026-03-02 20:08:21,593 [wrapper] cleanup supervisor_pilot 3872517 510182
[2026-03-02 21:25:42] 2026-03-02 20:08:21,599 [wrapper] Test setup, not cleaning
[2026-03-02 21:25:42] 2026-03-02 20:08:21,632 [wrapper] apfmon messages muted
[2026-03-02 21:25:42] 2026-03-02 20:08:21,656 [wrapper] ==== wrapper stdout END ====
[2026-03-02 21:25:42] 2026-03-02 20:08:21,725 [wrapper] ==== wrapper stderr END ====
[2026-03-02 21:25:42]  *** Error codes and diagnostics ***
[2026-03-02 21:25:42]     "exeErrorCode": 0,
[2026-03-02 21:25:42]     "exeErrorDiag": "",
[2026-03-02 21:25:42]     "pilotErrorCode": 0,
[2026-03-02 21:25:42]     "pilotErrorDiag": "",
[2026-03-02 21:25:42]  *** Listing of results directory ***
[2026-03-02 21:25:42] total 449240
[2026-03-02 21:25:42] -rwx------. 1 boincer umatlas     36322 Feb 28 11:02 runpilot2-wrapper.sh
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 11:04 queuedata.json
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 11:04 pilot3.tar.gz
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas       100 Mar  1 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 21:25:42] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  1 00:01 run_atlas
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas       105 Mar  1 00:01 job.xml
[2026-03-02 21:25:42] -rw-r--r--. 2 boincer umatlas 255749342 Mar  1 00:01 EVNT.48447954._000002.pool.root.1
[2026-03-02 21:25:42] -rw-r--r--. 2 boincer umatlas     15845 Mar  1 00:01 start_atlas.sh
[2026-03-02 21:25:42] drwxrwx--x. 2 boincer umatlas      4096 Mar  1 00:01 shared
[2026-03-02 21:25:42] -rw-r--r--. 2 boincer umatlas    597984 Mar  1 00:01 input.tar.gz
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas         0 Mar  1 00:01 boinc_lockfile
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas      2615 Mar  1 00:01 pandaJob.out
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas        57 Mar  1 00:02 setup.sh.local
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas    998782 Mar  1 00:03 agis_schedconf.cvmfs.json
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas       441 Mar  1 00:04 workernode_map.json
[2026-03-02 21:25:42] drwx------. 5 boincer umatlas      4096 Mar  1 00:04 pilot3
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas 173592999 Mar  2 15:01 HITS.48842404._000079.pool.root.1
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas       531 Mar  2 15:01 boinc_task_state.xml
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas      1039 Mar  2 15:06 memory_monitor_summary.json
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas   1512931 Mar  2 15:06 agis_ddmendpoints.agis.ALL.json
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas   1614572 Mar  2 15:06 log.48842404._000079.job.log.tgz.1
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas        95 Mar  2 15:06 pilot_heartbeat.json
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas      6381 Mar  2 15:07 heartbeat.json
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas      4819 Mar  2 15:08 pilotlog.txt
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas  11757589 Mar  2 15:08 log.48842404._000079.job.log.1
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas       357 Mar  2 15:08 output.list
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas       620 Mar  2 15:08 runtime_log
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas  13393920 Mar  2 15:08 result.tar.gz
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas      9338 Mar  2 15:08 runtime_log.err
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas       659 Mar  2 15:08 NXLKDmkwbG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDy5KDmqbrhXn.diag
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas      6524 Mar  2 21:22 init_data.xml
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas      8192 Mar  2 21:25 boinc_mmap_file
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas        28 Mar  2 21:25 wrapper_checkpoint.txt
[2026-03-02 21:25:42] -rw-r--r--. 1 boincer umatlas     21456 Mar  2 21:25 stderr.txt
[2026-03-02 21:25:42] HITS file was successfully produced:
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas 173592999 Mar  2 15:01 shared/HITS.pool.root.1
[2026-03-02 21:25:42]  *** Contents of shared directory: ***
[2026-03-02 21:25:42] total 432968
[2026-03-02 21:25:42] -rw-r--r--. 2 boincer umatlas 255749342 Mar  1 00:01 ATLAS.root_0
[2026-03-02 21:25:42] -rw-r--r--. 2 boincer umatlas     15845 Mar  1 00:01 start_atlas.sh
[2026-03-02 21:25:42] -rw-r--r--. 2 boincer umatlas    597984 Mar  1 00:01 input.tar.gz
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas 173592999 Mar  2 15:01 HITS.pool.root.1
[2026-03-02 21:25:42] -rw-------. 1 boincer umatlas  13393920 Mar  2 15:08 result.tar.gz
21:26:04 (504642): run_atlas exited; CPU time 84007.858024
21:26:04 (504642): called boinc_finish(0)

</stderr_txt>
]]>

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