Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:01:37 (250228): wrapper (7.7.26015): starting
17:01:37 (250228): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 17:01:37] Arguments: --nthreads 4
[2026-02-28 17:01:37] Threads: 4
[2026-02-28 17:01:37] Checking for CVMFS
[2026-02-28 17:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 17:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 17:01:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 17:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 17:01:37] 2.13.3.0 3189510 4864 53412 156751 1 188 4765192 6144001 5538 130560 0 12732808 99.996 196652 1280 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-28 17:01:37] CVMFS is ok
[2026-02-28 17:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 17:01:37] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-28 17:01:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-28 17:01:37] Further information can be found at the LHC@home message board.
[2026-02-28 17:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 17:01:37] Checking for apptainer binary...
[2026-02-28 17:01:37] apptainer is not installed, using version from CVMFS
[2026-02-28 17:01:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 17:01:37] desktop-b650ef
[2026-02-28 17:01:37] apptainer works
[2026-02-28 17:01:37] Set ATHENA_PROC_NUMBER=4
[2026-02-28 17:01:37] Set ATHENA_CORE_NUMBER=4
[2026-02-28 17:01:37] Starting ATLAS job with PandaID=7033279380
[2026-02-28 17:01:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 18:35:04]  *** The last 200 lines of the pilot log: ***
[2026-02-28 18:35:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-28 18:35:04]  is_altstaged=None
[2026-02-28 18:35:04]  is_tar=False
[2026-02-28 18:35:04]  lfn=log.48838432._003991.job.log.tgz.1
[2026-02-28 18:35:04]  mtime=0
[2026-02-28 18:35:04]  protocol_id=None
[2026-02-28 18:35:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-28 18:35:04]  replicas=None
[2026-02-28 18:35:04]  scope=mc23_13p6TeV
[2026-02-28 18:35:04]  status=None
[2026-02-28 18:35:04]  status_code=0
[2026-02-28 18:35:04]  storage_token=
[2026-02-28 18:35:04]  surl=/var/lib/boinc-client/slots/17/PanDA_Pilot-7033279380/log.48838432._003991.job.log.tgz.1
[2026-02-28 18:35:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/c4/log.48838432._003991.job.log.tgz.1
[2026-02-28 18:35:04]  workdir=None
[2026-02-28 18:35:04] ]
[2026-02-28 18:35:04] 2026-03-01 02:34:21,523 | INFO     | transferring file log.48838432._003991.job.log.tgz.1 from /var/lib/boinc-client/slots/17/PanDA_Pilot-7033279380/log.48838432._003991.job.log.tgz.1 to /var/lib/boin
[2026-02-28 18:35:04] 2026-03-01 02:34:21,523 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/17/PanDA_Pilot-7033279380/log.48838432._003991.job.log.tgz.1 /var/lib/boinc-client/slots/17/log.4883
[2026-02-28 18:35:04] 2026-03-01 02:34:21,534 | INFO     | adding to output.list: log.48838432._003991.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/c4/log.48838432._003991.job.log.tg
[2026-02-28 18:35:04] 2026-03-01 02:34:21,535 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-28 18:35:04] 2026-03-01 02:34:21,535 | INFO     | summary of transferred files:
[2026-02-28 18:35:04] 2026-03-01 02:34:21,535 | INFO     |  -- lfn=log.48838432._003991.job.log.tgz.1, status_code=0, status=transferred
[2026-02-28 18:35:04] 2026-03-01 02:34:21,535 | INFO     | stage-out finished correctly
[2026-02-28 18:35:04] 2026-03-01 02:34:22,224 | INFO     | time since job start (5552s) is within the limit (349056.0s)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,730 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 18:35:04] 2026-03-01 02:34:23,815 | INFO     | job 7033279380 has state=finished
[2026-02-28 18:35:04] 2026-03-01 02:34:23,815 | INFO     | preparing for final server update for job 7033279380 in state='finished'
[2026-02-28 18:35:04] 2026-03-01 02:34:23,815 | INFO     | reading metadata from: /var/lib/boinc-client/slots/17/PanDA_Pilot-7033279380/jobReport.json
[2026-02-28 18:35:04] 2026-03-01 02:34:23,816 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/17/workernode_map.json
[2026-02-28 18:35:04] 2026-03-01 02:34:23,816 | INFO     | this job has now completed (state=finished)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,816 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,816 | INFO     | log transfer has been attempted: DONE
[2026-02-28 18:35:04] 2026-03-01 02:34:23,816 | INFO     | job 7033279380 has finished - writing final server update
[2026-02-28 18:35:04] 2026-03-01 02:34:23,817 | INFO     | total number of processed events: 400 (read)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,820 | INFO     | using path: /var/lib/boinc-client/slots/17/PanDA_Pilot-7033279380/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,820 | INFO     | extracted standard info from prmon json
[2026-02-28 18:35:04] 2026-03-01 02:34:23,820 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 18:35:04] 2026-03-01 02:34:23,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 18:35:04] 2026-03-01 02:34:23,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 18:35:04] 2026-03-01 02:34:23,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 18:35:04] 2026-03-01 02:34:23,821 | INFO     | fitting pss+swap vs Time
[2026-02-28 18:35:04] 2026-03-01 02:34:23,821 | INFO     | sum of square deviations: 183761585.0
[2026-02-28 18:35:04] 2026-03-01 02:34:23,821 | INFO     | sum of deviations: -1686758946.0000002
[2026-02-28 18:35:04] 2026-03-01 02:34:23,821 | INFO     | mean x: 1772329763.5
[2026-02-28 18:35:04] 2026-03-01 02:34:23,821 | INFO     | mean y: 2370951.8095238097
[2026-02-28 18:35:04] 2026-03-01 02:34:23,821 | INFO     | intersect: 16270695388.854893
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | chi2: 0.021897657347071
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | current memory leak: -9.18 B/s (using 84 data points, chi2=0.02)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | could have reported an average CPU frequency of 4633 MHz (7 samples)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | ..............................
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . Timing measurements:
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . get job = 0 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . initial setup = 5 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . payload setup = 3 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . stage-in = 0 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . payload execution = 5533 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . stage-out = 0 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | . log creation = 0 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,822 | INFO     | ..............................
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | 
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | job summary report
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | --------------------------------------------------
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | PanDA job id: 7033279380
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | task id: 48838432
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | errors: (none)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | pilot state: finished 
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | transexitcode: 0
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | exeerrorcode: 0
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | exeerrordiag: 
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | exitcode: 0
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | exitmsg: OK
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | cpuconsumptiontime: 21260 s
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | nevents: 400
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | neventsw: 0
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | pid: 258824
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | pgrp: 258824
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | corecount: 4
[2026-02-28 18:35:04] 2026-03-01 02:34:23,867 | INFO     | event service: False
[2026-02-28 18:35:04] 2026-03-01 02:34:23,868 | INFO     | sizes: {0: 2282298, 11: 2282298, 5540: 2318043, 5543: 2318237}
[2026-02-28 18:35:04] 2026-03-01 02:34:23,868 | INFO     | --------------------------------------------------
[2026-02-28 18:35:04] 2026-03-01 02:34:23,868 | INFO     | 
[2026-02-28 18:35:04] 2026-03-01 02:34:23,868 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/17
[2026-02-28 18:35:04] 2026-03-01 02:34:23,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,880 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | job 7033279380 has completed (purged errors)
[2026-02-28 18:35:04] 2026-03-01 02:34:23,881 | INFO     | overall cleanup function is called
[2026-02-28 18:35:04] 2026-03-01 02:34:24,888 | INFO     | --- collectZombieJob: --- 10, [258824]
[2026-02-28 18:35:04] 2026-03-01 02:34:24,888 | INFO     | zombie collector waiting for pid 258824
[2026-02-28 18:35:04] 2026-03-01 02:34:24,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 18:35:04] 2026-03-01 02:34:24,888 | INFO     | collected zombie processes
[2026-02-28 18:35:04] 2026-03-01 02:34:24,888 | INFO     | will attempt to kill all subprocesses of pid=258824
[2026-02-28 18:35:04] 2026-03-01 02:34:24,987 | INFO     | process IDs to be killed: [258824] (in reverse order)
[2026-02-28 18:35:04] 2026-03-01 02:34:25,030 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 18:35:04] 2026-03-01 02:34:25,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 18:35:04] 2026-03-01 02:34:25,033 | INFO     | did not find any defunct processes belonging to 258824
[2026-02-28 18:35:04] 2026-03-01 02:34:25,036 | INFO     | did not find any defunct processes belonging to 258824
[2026-02-28 18:35:04] 2026-03-01 02:34:25,036 | INFO     | ready for new job
[2026-02-28 18:35:04] 2026-03-01 02:34:25,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 18:35:04] 2026-03-01 02:34:25,037 | INFO     | **************************************
[2026-02-28 18:35:04] 2026-03-01 02:34:25,037 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 18:35:04] 2026-03-01 02:34:25,037 | INFO     | **************************************
[2026-02-28 18:35:04] 2026-03-01 02:34:25,037 | INFO     | 
[2026-02-28 18:35:04] 2026-03-01 02:34:25,038 | INFO     | architecture information:
[2026-02-28 18:35:04] 2026-03-01 02:34:25,038 | INFO     | executing command: cat /etc/os-release
[2026-02-28 18:35:04] 2026-03-01 02:34:25,052 | INFO     | cat /etc/os-release:
[2026-02-28 18:35:04] NAME="CentOS Linux"
[2026-02-28 18:35:04] VERSION="7 (Core)"
[2026-02-28 18:35:04] ID="centos"
[2026-02-28 18:35:04] ID_LIKE="rhel fedora"
[2026-02-28 18:35:04] VERSION_ID="7"
[2026-02-28 18:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 18:35:04] ANSI_COLOR="0;31"
[2026-02-28 18:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 18:35:04] HOME_URL="https://www.centos.org/"
[2026-02-28 18:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 18:35:04] 
[2026-02-28 18:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 18:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 18:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 18:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 18:35:04] 
[2026-02-28 18:35:04] 2026-03-01 02:34:25,052 | INFO     | **************************************
[2026-02-28 18:35:04] 2026-03-01 02:34:25,555 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/17
[2026-02-28 18:35:04] 2026-03-01 02:34:25,567 | INFO     | sufficient remaining disk space (403011796992 B)
[2026-02-28 18:35:04] 2026-03-01 02:34:25,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 18:35:04] 2026-03-01 02:34:25,567 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 18:35:04] 2026-03-01 02:34:25,567 | INFO     | update_server=False
[2026-02-28 18:35:04] 2026-03-01 02:34:25,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 18:35:04] 2026-03-01 02:34:25,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 18:35:04] 2026-03-01 02:34:25,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 18:35:04] 2026-03-01 02:34:25,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 18:35:04] 2026-03-01 02:34:26,290 | INFO     | all job control threads have been joined
[2026-02-28 18:35:04] 2026-03-01 02:34:26,491 | INFO     | all payload control threads have been joined
[2026-02-28 18:35:04] 2026-03-01 02:34:26,491 | INFO     | all data control threads have been joined
[2026-02-28 18:35:04] 2026-03-01 02:34:26,573 | INFO     | [job] queue monitor thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:26,573 | INFO     | [job] retrieve thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:26,620 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:26,663 | INFO     | [payload] validate_post thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:26,746 | INFO     | [data] copytool_in thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:26,965 | WARNING  | process 258824 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 18:35:04] 2026-03-01 02:34:27,033 | INFO     | using path: /var/lib/boinc-client/slots/17/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 18:35:04] 2026-03-01 02:34:27,053 | INFO     | [payload] failed_post thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,134 | INFO     | number of running child processes to parent process 258824: 1
[2026-02-28 18:35:04] 2026-03-01 02:34:27,134 | INFO     | maximum number of monitored processes: 6
[2026-02-28 18:35:04] 2026-03-01 02:34:27,134 | INFO     | aborting job monitoring since job object (job id=7033279380) has expired
[2026-02-28 18:35:04] 2026-03-01 02:34:27,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 18:35:04] 2026-03-01 02:34:27,134 | INFO     | will abort loop
[2026-02-28 18:35:04] 2026-03-01 02:34:27,296 | INFO     | [job] control thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,495 | INFO     | [payload] control thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,496 | INFO     | [data] control thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,573 | INFO     | [data] copytool_out thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,839 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,874 | INFO     | [job] validate thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:27,953 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:28,138 | INFO     | [job] job monitor thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:29,573 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:35,830 | INFO     | job.realtimelogging is not enabled
[2026-02-28 18:35:04] 2026-03-01 02:34:36,835 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 18:35:04] 2026-03-01 02:34:55,401 | INFO     | PID=254187 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 18:35:04] 2026-03-01 02:34:55,401 | INFO     | .. there are 7 such processes running
[2026-02-28 18:35:04] 2026-03-01 02:34:55,402 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 18:35:04] 2026-03-01 02:34:55,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 18:35:04] 2026-03-01 02:34:55,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 18:35:04] 2026-03-01 02:34:58,776 | INFO     | [monitor] cgroup control has ended
[2026-02-28 18:35:04] 2026-03-01 02:34:59,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126866047153984)>', '<ExcThread(monitor, started 126865641547520)>']
[2026-02-28 18:35:04] 2026-03-01 02:35:00,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 18:35:04] 2026-03-01 02:35:00,426 | INFO     | [monitor] control thread has ended
[2026-02-28 18:35:04] 2026-03-01 02:35:04,807 | INFO     | all workflow threads have been joined
[2026-02-28 18:35:04] 2026-03-01 02:35:04,807 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 18:35:04] 2026-03-01 02:35:04,807 | INFO     | traces error code: 0
[2026-02-28 18:35:04] 2026-03-01 02:35:04,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 18:35:04] 2026-03-01 02:35:04,867 [wrapper] ==== pilot stdout END ====
[2026-02-28 18:35:04] 2026-03-01 02:35:04,869 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 18:35:04] 2026-03-01 02:35:04,871 [wrapper] pilotpid: 254187
[2026-02-28 18:35:04] 2026-03-01 02:35:04,872 [wrapper] Pilot exit status: 0
[2026-02-28 18:35:04] 2026-03-01 02:35:04,878 [wrapper] pandaids: 7033279380
[2026-02-28 18:35:04] 2026-03-01 02:35:04,906 [wrapper] cleanup supervisor_pilot  380477 254188
[2026-02-28 18:35:04] 2026-03-01 02:35:04,907 [wrapper] Test setup, not cleaning
[2026-02-28 18:35:04] 2026-03-01 02:35:04,909 [wrapper] apfmon messages muted
[2026-02-28 18:35:04] 2026-03-01 02:35:04,911 [wrapper] ==== wrapper stdout END ====
[2026-02-28 18:35:04] 2026-03-01 02:35:04,913 [wrapper] ==== wrapper stderr END ====
[2026-02-28 18:35:04]  *** Error codes and diagnostics ***
[2026-02-28 18:35:04]     "exeErrorCode": 0,
[2026-02-28 18:35:04]     "exeErrorDiag": "",
[2026-02-28 18:35:04]     "pilotErrorCode": 0,
[2026-02-28 18:35:04]     "pilotErrorDiag": "",
[2026-02-28 18:35:04]  *** Listing of results directory ***
[2026-02-28 18:35:04] total 502700
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc    584627 Feb 28 05:52 pilot3.tar.gz
[2026-02-28 18:35:04] -rwx------ 1 boinc boinc     36322 Feb 28 05:52 runpilot2-wrapper.sh
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc      5111 Feb 28 05:53 queuedata.json
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc       100 Feb 28 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 18:35:04] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 17:01 run_atlas
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc       105 Feb 28 17:01 job.xml
[2026-02-28 18:35:04] -rw-r--r-- 2 boinc boinc 284677825 Feb 28 17:01 EVNT.48220101._000153.pool.root.1
[2026-02-28 18:35:04] -rw-r--r-- 2 boinc boinc    597975 Feb 28 17:01 input.tar.gz
[2026-02-28 18:35:04] drwxrwx--x 2 boinc boinc      4096 Feb 28 17:01 shared
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc         0 Feb 28 17:01 boinc_setup_complete
[2026-02-28 18:35:04] -rw-r--r-- 2 boinc boinc     15845 Feb 28 17:01 start_atlas.sh
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc     10207 Feb 28 17:01 init_data.xml
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc         0 Feb 28 17:01 boinc_lockfile
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc      2579 Feb 28 17:01 pandaJob.out
[2026-02-28 18:35:04] -rw------- 1 boinc boinc    998790 Feb 28 17:01 agis_schedconf.cvmfs.json
[2026-02-28 18:35:04] -rw------- 1 boinc boinc   1513015 Feb 28 17:01 agis_ddmendpoints.agis.ALL.json
[2026-02-28 18:35:04] -rw------- 1 boinc boinc       429 Feb 28 17:01 workernode_map.json
[2026-02-28 18:35:04] drwx------ 5 boinc boinc      4096 Feb 28 17:01 pilot3
[2026-02-28 18:35:04] -rw------- 1 boinc boinc 223974346 Feb 28 18:34 HITS.48838432._003991.pool.root.1
[2026-02-28 18:35:04] -rw------- 1 boinc boinc      1025 Feb 28 18:34 memory_monitor_summary.json
[2026-02-28 18:35:04] -rw------- 1 boinc boinc    265261 Feb 28 18:34 log.48838432._003991.job.log.tgz.1
[2026-02-28 18:35:04] -rw------- 1 boinc boinc      6298 Feb 28 18:34 heartbeat.json
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc       529 Feb 28 18:34 boinc_task_state.xml
[2026-02-28 18:35:04] -rw------- 1 boinc boinc        95 Feb 28 18:34 pilot_heartbeat.json
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc      8192 Feb 28 18:34 boinc_mmap_file
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc        27 Feb 28 18:34 wrapper_checkpoint.txt
[2026-02-28 18:35:04] -rw------- 1 boinc boinc      5426 Feb 28 18:35 pilotlog.txt
[2026-02-28 18:35:04] -rw------- 1 boinc boinc    826435 Feb 28 18:35 log.48838432._003991.job.log.1
[2026-02-28 18:35:04] -rw------- 1 boinc boinc       357 Feb 28 18:35 output.list
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc       620 Feb 28 18:35 runtime_log
[2026-02-28 18:35:04] -rw------- 1 boinc boinc   1105920 Feb 28 18:35 result.tar.gz
[2026-02-28 18:35:04] -rw------- 1 boinc boinc       655 Feb 28 18:35 OjdNDmcvZG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxM7KDmPqSYRm.diag
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc      8963 Feb 28 18:35 runtime_log.err
[2026-02-28 18:35:04] -rw-r--r-- 1 boinc boinc     21525 Feb 28 18:35 stderr.txt
[2026-02-28 18:35:04] HITS file was successfully produced:
[2026-02-28 18:35:04] -rw------- 1 boinc boinc 223974346 Feb 28 18:34 shared/HITS.pool.root.1
[2026-02-28 18:35:04]  *** Contents of shared directory: ***
[2026-02-28 18:35:04] total 498424
[2026-02-28 18:35:04] -rw-r--r-- 2 boinc boinc 284677825 Feb 28 17:01 ATLAS.root_0
[2026-02-28 18:35:04] -rw-r--r-- 2 boinc boinc    597975 Feb 28 17:01 input.tar.gz
[2026-02-28 18:35:04] -rw-r--r-- 2 boinc boinc     15845 Feb 28 17:01 start_atlas.sh
[2026-02-28 18:35:04] -rw------- 1 boinc boinc 223974346 Feb 28 18:34 HITS.pool.root.1
[2026-02-28 18:35:04] -rw------- 1 boinc boinc   1105920 Feb 28 18:35 result.tar.gz
18:35:06 (250228): run_atlas exited; CPU time 21321.334932
18:35:06 (250228): called boinc_finish(0)

</stderr_txt>
]]>

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