Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:39:53 (745480): wrapper (7.7.26015): starting
11:39:53 (745480): wrapper: running run_atlas (--nthreads 3)
[2026-03-01 11:39:53] Arguments: --nthreads 3
[2026-03-01 11:39:53] Threads: 3
[2026-03-01 11:39:53] Checking for CVMFS
[2026-03-01 11:39:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 11:39:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 11:39:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 11:39:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 11:39:53] 2.9.2.0 38142 5415 80916 156766 0 49 27942439 36864001 0 130560 0 1978527 99.979 218014 11425 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-01 11:39:53] CVMFS is ok
[2026-03-01 11:39:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 11:39:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 11:39:53] Further information can be found at the LHC@home message board.
[2026-03-01 11:39:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 11:39:53] Checking for apptainer binary...
[2026-03-01 11:39:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 11:39:53] Running /usr/bin/apptainer --version
[2026-03-01 11:39:53] apptainer version 1.4.1-1.1
[2026-03-01 11:39:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 11:39:53] thA312a
[2026-03-01 11:39:53] apptainer works
[2026-03-01 11:39:53] Set ATHENA_PROC_NUMBER=3
[2026-03-01 11:39:53] Set ATHENA_CORE_NUMBER=3
[2026-03-01 11:39:53] Starting ATLAS job with PandaID=7033009656
[2026-03-01 11:39:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 13:14:17]  *** The last 200 lines of the pilot log: ***
[2026-03-01 13:14:17] 2026-03-01 12:13:16,686 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-01 13:14:17] 2026-03-01 12:13:16,686 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 13:14:17] 2026-03-01 12:13:16,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 13:14:17] 2026-03-01 12:13:16,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 13:14:17] 2026-03-01 12:13:16,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 13:14:17] 2026-03-01 12:13:16,687 | INFO     | aborting loop
[2026-03-01 13:14:17] 2026-03-01 12:13:16,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 13:14:17] 2026-03-01 12:13:17,008 | INFO     | all payload control threads have been joined
[2026-03-01 13:14:17] 2026-03-01 12:13:17,435 | INFO     | all data control threads have been joined
[2026-03-01 13:14:17] 2026-03-01 12:13:17,692 | INFO     | [job] retrieve thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:17,692 | INFO     | [job] queue monitor thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:17,692 | INFO     | [job] job monitor thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:17,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 13:14:17] 2026-03-01 12:13:17,730 | INFO     | [payload] validate_post thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,014 | INFO     | [payload] control thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,051 | INFO     | all job control threads have been joined
[2026-03-01 13:14:17] 2026-03-01 12:13:18,441 | INFO     | [data] control thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,551 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,733 | INFO     | [job] validate thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,737 | INFO     | [payload] failed_post thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,768 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,778 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:18,927 | INFO     | [data] copytool_in thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:19,056 | INFO     | [job] control thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:19,729 | INFO     | [data] copytool_out thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:20,694 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:13:26,832 | INFO     | job.realtimelogging is not enabled
[2026-03-01 13:14:17] 2026-03-01 12:13:27,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 13:14:17] 2026-03-01 12:14:10,415 | INFO     | [monitor] cgroup control has ended
[2026-03-01 13:14:17] 2026-03-01 12:14:12,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228264621888)>', '<ExcThread(monitor, started 140227779745536)>']
[2026-03-01 13:14:17] 2026-03-01 12:14:12,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 13:14:17] 2026-03-01 12:14:12,975 | INFO     | [monitor] control thread has ended
[2026-03-01 13:14:17] 2026-03-01 12:14:17,082 | INFO     | all workflow threads have been joined
[2026-03-01 13:14:17] 2026-03-01 12:14:17,083 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 13:14:17] 2026-03-01 12:14:17,083 | INFO     | traces error code: 0
[2026-03-01 13:14:17] 2026-03-01 12:14:17,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 13:14:17] 2026-03-01 12:14:17,131 [wrapper] ==== pilot stdout END ====
[2026-03-01 13:14:17] 2026-03-01 12:14:17,134 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 13:14:17] 2026-03-01 12:14:17,137 [wrapper] pilotpid: 749522
[2026-03-01 13:14:17] 2026-03-01 12:14:17,139 [wrapper] Pilot exit status: 0
[2026-03-01 13:14:17] 2026-03-01 12:14:17,147 [wrapper] pandaids: 7033009656
[2026-03-01 13:14:17] 2026-03-01 12:14:17,165 [wrapper] cleanup supervisor_pilot  759554 749523
[2026-03-01 13:14:17] 2026-03-01 12:14:17,167 [wrapper] Test setup, not cleaning
[2026-03-01 13:14:17] 2026-03-01 12:14:17,170 [wrapper] apfmon messages muted
[2026-03-01 13:14:17] 2026-03-01 12:14:17,172 [wrapper] ==== wrapper stdout END ====
[2026-03-01 13:14:17] 2026-03-01 12:14:17,175 [wrapper] ==== wrapper stderr END ====
[2026-03-01 13:14:17]  *** Error codes and diagnostics ***
[2026-03-01 13:14:17]     "exeErrorCode": 0,
[2026-03-01 13:14:17]     "exeErrorDiag": "",
[2026-03-01 13:14:17]     "pilotErrorCode": 0,
[2026-03-01 13:14:17]     "pilotErrorDiag": "",
[2026-03-01 13:14:17]  *** Listing of results directory ***
[2026-03-01 13:14:17] total 467880
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc    584627 Feb 28 13:40 pilot3.tar.gz
[2026-03-01 13:14:17] -rwx------ 1 boinc boinc     36322 Feb 28 13:42 runpilot2-wrapper.sh
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc      5111 Feb 28 13:43 queuedata.json
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc       100 Mar  1 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 13:14:17] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 11:39 run_atlas
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc       105 Mar  1 11:39 job.xml
[2026-03-01 13:14:17] -rw-r--r-- 2 boinc boinc 269491928 Mar  1 11:39 EVNT.48343704._000063.pool.root.1
[2026-03-01 13:14:17] -rw-r--r-- 2 boinc boinc    597974 Mar  1 11:39 input.tar.gz
[2026-03-01 13:14:17] -rw-r--r-- 2 boinc boinc     15845 Mar  1 11:39 start_atlas.sh
[2026-03-01 13:14:17] drwxrwx--x 2 boinc boinc      4096 Mar  1 11:39 shared
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc         0 Mar  1 11:39 boinc_setup_complete
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc      6447 Mar  1 11:39 init_data.xml
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc         0 Mar  1 11:39 boinc_lockfile
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc      2574 Mar  1 11:39 pandaJob.out
[2026-03-01 13:14:17] -rw------- 1 boinc boinc    998198 Mar  1 11:40 agis_schedconf.cvmfs.json
[2026-03-01 13:14:17] -rw------- 1 boinc boinc   1513015 Mar  1 11:40 agis_ddmendpoints.agis.ALL.json
[2026-03-01 13:14:17] -rw------- 1 boinc boinc       424 Mar  1 11:40 workernode_map.json
[2026-03-01 13:14:17] drwx------ 5 boinc boinc      4096 Mar  1 11:40 pilot3
[2026-03-01 13:14:17] -rw------- 1 boinc boinc        95 Mar  1 13:12 pilot_heartbeat.json
[2026-03-01 13:14:17] -rw------- 1 boinc boinc 203536555 Mar  1 13:12 HITS.48838536._001570.pool.root.1
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc       529 Mar  1 13:13 boinc_task_state.xml
[2026-03-01 13:14:17] -rw------- 1 boinc boinc      1030 Mar  1 13:13 memory_monitor_summary.json
[2026-03-01 13:14:17] -rw------- 1 boinc boinc    271883 Mar  1 13:13 log.48838536._001570.job.log.tgz.1
[2026-03-01 13:14:17] -rw------- 1 boinc boinc      6299 Mar  1 13:13 heartbeat.json
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc        27 Mar  1 13:14 wrapper_checkpoint.txt
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc      8192 Mar  1 13:14 boinc_mmap_file
[2026-03-01 13:14:17] -rw------- 1 boinc boinc      4624 Mar  1 13:14 pilotlog.txt
[2026-03-01 13:14:17] -rw------- 1 boinc boinc    814011 Mar  1 13:14 log.48838536._001570.job.log.1
[2026-03-01 13:14:17] -rw------- 1 boinc boinc       357 Mar  1 13:14 output.list
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc       620 Mar  1 13:14 runtime_log
[2026-03-01 13:14:17] -rw------- 1 boinc boinc   1105920 Mar  1 13:14 result.tar.gz
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc      8901 Mar  1 13:14 runtime_log.err
[2026-03-01 13:14:17] -rw------- 1 boinc boinc       658 Mar  1 13:14 d4mLDmcpYG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQO5KDmsM5KEm.diag
[2026-03-01 13:14:17] -rw-r--r-- 1 boinc boinc      7078 Mar  1 13:14 stderr.txt
[2026-03-01 13:14:17] HITS file was successfully produced:
[2026-03-01 13:14:17] -rw------- 1 boinc boinc 203536555 Mar  1 13:12 shared/HITS.pool.root.1
[2026-03-01 13:14:17]  *** Contents of shared directory: ***
[2026-03-01 13:14:17] total 463628
[2026-03-01 13:14:17] -rw-r--r-- 2 boinc boinc 269491928 Mar  1 11:39 ATLAS.root_0
[2026-03-01 13:14:17] -rw-r--r-- 2 boinc boinc    597974 Mar  1 11:39 input.tar.gz
[2026-03-01 13:14:17] -rw-r--r-- 2 boinc boinc     15845 Mar  1 11:39 start_atlas.sh
[2026-03-01 13:14:17] -rw------- 1 boinc boinc 203536555 Mar  1 13:12 HITS.pool.root.1
[2026-03-01 13:14:17] -rw------- 1 boinc boinc   1105920 Mar  1 13:14 result.tar.gz
13:14:18 (745480): run_atlas exited; CPU time 15986.894492
13:14:18 (745480): called boinc_finish(0)

</stderr_txt>
]]>

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