Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:04:47 (580081): wrapper (7.7.26015): starting
15:04:47 (580081): wrapper: running run_atlas (--nthreads 12)
[2026-02-28 15:04:47] Arguments: --nthreads 12
[2026-02-28 15:04:47] Threads: 12
[2026-02-28 15:04:47] Checking for CVMFS
[2026-02-28 15:04:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 15:04:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 15:04:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 15:04:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 15:04:49] 2.11.5.0 70212 14638 231176 156748 3 17 42808424 45568000 26389 130560 0 119395070 99.802 67074230 26864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-28 15:04:49] CVMFS is ok
[2026-02-28 15:04:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 15:04:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 15:04:49] Further information can be found at the LHC@home message board.
[2026-02-28 15:04:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 15:04:49] Checking for apptainer binary...
[2026-02-28 15:04:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 15:04:49] Running /usr/bin/apptainer --version
[2026-02-28 15:04:49] apptainer version 1.4.1-1.el9
[2026-02-28 15:04:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 15:04:50] wns0054.triumf.lcg
[2026-02-28 15:04:50] apptainer works
[2026-02-28 15:04:50] Set ATHENA_PROC_NUMBER=12
[2026-02-28 15:04:50] Set ATHENA_CORE_NUMBER=12
[2026-02-28 15:04:50] Starting ATLAS job with PandaID=7033784737
[2026-02-28 15:04:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 15:09:43]  *** The last 200 lines of the pilot log: ***
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | wrong length of table data, x=[1772319975.0], y=[969.0] (must be same and length>=4)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | ..............................
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . Timing measurements:
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . get job = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . initial setup = 19 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . payload setup = 19 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . stage-in = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . payload execution = 46 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . stage-out = 1 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . log creation = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | ..............................
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033784737/pilotlog.txt
[2026-02-28 15:09:43] 2026-02-28 23:08:47,158 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-28 15:09:43] - Log from pilotlog.txt -
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7033784737/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | INFO     | extracted standard info from prmon json
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | wrong length of table data, x=[1772319975.0], y=[969.0] (must be same and length>=4)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | ..............................
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . Timing measurements:
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . get job = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . initial setup = 19 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . payload setup = 19 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . stage-in = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . payload execution = 46 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . stage-out = 1 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . log creation = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | ..............................
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033784737/pilotlog.txt
[2026-02-28 15:09:43] 2026-02-28 23:08:47,158 | WARNING  | 
[2026-02-28 15:09:43] [begin log extracts]
[2026-02-28 15:09:43] - Log from pilotlog.txt -
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7033784737/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | INFO     | extracted standard info from prmon json
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 15:09:43] 2026-02-28 23:08:47,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | WARNING  | wrong length of table data, x=[1772319975.0], y=[969.0] (must be same and length>=4)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,036 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | ..............................
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . Timing measurements:
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . get job = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . initial setup = 19 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . payload setup = 19 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . stage-in = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . payload execution = 46 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . stage-out = 1 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | . log creation = 0 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | ..............................
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 15:09:43] 2026-02-28 23:08:47,037 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033784737/pilotlog.txt
[2026-02-28 15:09:43] [end log extracts]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,159 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,160 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | 
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | job summary report
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | --------------------------------------------------
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | PanDA job id: 7033784737
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | task id: 48843939
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-28 15:06:37,547 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | pilot state: failed 
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | transexitcode: 65
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | exeerrorcode: 65
[2026-02-28 15:09:43] 2026-02-28 23:08:47,322 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | exitcode: 65
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | cpuconsumptiontime: 13 s
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | nevents: 0
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | neventsw: 0
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | pid: 588520
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | pgrp: 588520
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | corecount: 12
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | event service: False
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | sizes: {0: 2281925, 1: 2282386, 69: 2305592, 71: 2309884, 73: 2309972, 189: 2310138}
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | --------------------------------------------------
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | 
[2026-02-28 15:09:43] 2026-02-28 23:08:47,323 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-28 15:09:43] 2026-02-28 23:08:47,493 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,493 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 15:09:43] 2026-02-28 23:08:47,495 | INFO     | job 7033784737 has completed (purged errors)
[2026-02-28 15:09:43] 2026-02-28 23:08:47,495 | INFO     | overall cleanup function is called
[2026-02-28 15:09:43] 2026-02-28 23:08:48,502 | INFO     | --- collectZombieJob: --- 10, [588520]
[2026-02-28 15:09:43] 2026-02-28 23:08:48,502 | INFO     | zombie collector waiting for pid 588520
[2026-02-28 15:09:43] 2026-02-28 23:08:48,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 15:09:43] 2026-02-28 23:08:48,502 | INFO     | collected zombie processes
[2026-02-28 15:09:43] 2026-02-28 23:08:48,502 | INFO     | will attempt to kill all subprocesses of pid=588520
[2026-02-28 15:09:43] 2026-02-28 23:08:49,121 | INFO     | process IDs to be killed: [588520] (in reverse order)
[2026-02-28 15:09:43] 2026-02-28 23:08:49,241 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 15:09:43] 2026-02-28 23:08:49,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 15:09:43] 2026-02-28 23:08:49,260 | INFO     | did not find any defunct processes belonging to 588520
[2026-02-28 15:09:43] 2026-02-28 23:08:49,269 | INFO     | did not find any defunct processes belonging to 588520
[2026-02-28 15:09:43] 2026-02-28 23:08:49,269 | INFO     | ready for new job
[2026-02-28 15:09:43] 2026-02-28 23:08:49,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 15:09:43] 2026-02-28 23:08:49,271 | INFO     | **************************************
[2026-02-28 15:09:43] 2026-02-28 23:08:49,271 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 15:09:43] 2026-02-28 23:08:49,271 | INFO     | **************************************
[2026-02-28 15:09:43] 2026-02-28 23:08:49,271 | INFO     | 
[2026-02-28 15:09:43] 2026-02-28 23:08:49,273 | INFO     | architecture information:
[2026-02-28 15:09:43] 2026-02-28 23:08:49,273 | INFO     | executing command: cat /etc/os-release
[2026-02-28 15:09:43] 2026-02-28 23:08:49,314 | INFO     | cat /etc/os-release:
[2026-02-28 15:09:43] NAME="CentOS Linux"
[2026-02-28 15:09:43] VERSION="7 (Core)"
[2026-02-28 15:09:43] ID="centos"
[2026-02-28 15:09:43] ID_LIKE="rhel fedora"
[2026-02-28 15:09:43] VERSION_ID="7"
[2026-02-28 15:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 15:09:43] ANSI_COLOR="0;31"
[2026-02-28 15:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 15:09:43] HOME_URL="https://www.centos.org/"
[2026-02-28 15:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 15:09:43] 
[2026-02-28 15:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 15:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 15:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 15:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 15:09:43] 
[2026-02-28 15:09:43] 2026-02-28 23:08:49,315 | INFO     | **************************************
[2026-02-28 15:09:43] 2026-02-28 23:08:49,818 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-28 15:09:43] 2026-02-28 23:08:49,859 | INFO     | sufficient remaining disk space (2125274808320 B)
[2026-02-28 15:09:43] 2026-02-28 23:08:49,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 15:09:43] 2026-02-28 23:08:49,860 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 15:09:43] 2026-02-28 23:08:49,860 | INFO     | update_server=False
[2026-02-28 15:09:43] 2026-02-28 23:08:49,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 15:09:43] 2026-02-28 23:08:49,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 15:09:43] 2026-02-28 23:08:50,084 | INFO     | all data control threads have been joined
[2026-02-28 15:09:43] 2026-02-28 23:08:50,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 15:09:43] 2026-02-28 23:08:50,167 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 15:09:43] 2026-02-28 23:08:50,167 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 15:09:43] 2026-02-28 23:08:50,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 15:09:43] 2026-02-28 23:08:50,167 | INFO     | will abort loop
[2026-02-28 15:09:43] 2026-02-28 23:08:50,268 | INFO     | all payload control threads have been joined
[2026-02-28 15:09:43] 2026-02-28 23:08:50,483 | INFO     | all job control threads have been joined
[2026-02-28 15:09:43] 2026-02-28 23:08:50,865 | INFO     | [job] retrieve thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:50,931 | INFO     | [job] validate thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,049 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,090 | INFO     | [data] control thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,173 | INFO     | [job] job monitor thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,274 | INFO     | [payload] control thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,489 | INFO     | [job] control thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,638 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,799 | INFO     | [payload] validate_post thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,815 | INFO     | [data] copytool_in thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:51,962 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:52,152 | INFO     | [data] copytool_out thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:52,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 15:09:43] 2026-02-28 23:08:52,451 | INFO     | [payload] failed_post thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:53,339 | INFO     | [job] queue monitor thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:08:53,874 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 15:09:43] 2026-02-28 23:09:20,158 | INFO     | PID=583850 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 15:09:43] 2026-02-28 23:09:20,158 | INFO     | .. there are 42 such processes running
[2026-02-28 15:09:43] 2026-02-28 23:09:20,158 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 15:09:43] 2026-02-28 23:09:20,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 15:09:43] 2026-02-28 23:09:20,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 15:09:43] 2026-02-28 23:09:36,207 | INFO     | [monitor] cgroup control has ended
[2026-02-28 15:09:43] 2026-02-28 23:09:36,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752792766272)>', '<ExcThread(monitor, started 139752263120640)>']
[2026-02-28 15:09:43] 2026-02-28 23:09:37,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 15:09:43] 2026-02-28 23:09:37,270 | INFO     | [monitor] control thread has ended
[2026-02-28 15:09:43] 2026-02-28 23:09:41,685 | INFO     | all workflow threads have been joined
[2026-02-28 15:09:43] 2026-02-28 23:09:41,685 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 15:09:43] 2026-02-28 23:09:41,685 | INFO     | traces error code: 0
[2026-02-28 15:09:43] 2026-02-28 23:09:41,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 15:09:43] 2026-02-28 23:09:42,213 [wrapper] ==== pilot stdout END ====
[2026-02-28 15:09:43] 2026-02-28 23:09:42,222 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 15:09:43] 2026-02-28 23:09:42,225 [wrapper] pilotpid: 583850
[2026-02-28 15:09:43] 2026-02-28 23:09:42,236 [wrapper] Pilot exit status: 0
[2026-02-28 15:09:43] 2026-02-28 23:09:42,373 [wrapper] pandaids: 7033784737
[2026-02-28 15:09:43] 2026-02-28 23:09:42,773 [wrapper] cleanup supervisor_pilot  583856 583851
[2026-02-28 15:09:43] 2026-02-28 23:09:42,783 [wrapper] Test setup, not cleaning
[2026-02-28 15:09:43] 2026-02-28 23:09:42,817 [wrapper] apfmon messages muted
[2026-02-28 15:09:43] 2026-02-28 23:09:42,843 [wrapper] ==== wrapper stdout END ====
[2026-02-28 15:09:43] 2026-02-28 23:09:42,873 [wrapper] ==== wrapper stderr END ====
[2026-02-28 15:09:43]  *** Error codes and diagnostics ***
[2026-02-28 15:09:43]     "exeErrorCode": 65,
[2026-02-28 15:09:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-28 15:09:43]     "pilotErrorCode": 1305,
[2026-02-28 15:09:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-28 15:09:43]  *** Listing of results directory ***
[2026-02-28 15:09:43] total 219520
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc    584627 Feb 28 10:22 pilot3.tar.gz
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc      5111 Feb 28 10:23 queuedata.json
[2026-02-28 15:09:43] -rwx------. 1 boinc boinc     36322 Feb 28 10:23 runpilot2-wrapper.sh
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc       100 Feb 28 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 15:09:43] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 15:04 run_atlas
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc       105 Feb 28 15:04 job.xml
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc      6594 Feb 28 15:04 init_data.xml
[2026-02-28 15:09:43] -rw-r--r--. 2 boinc boinc 220653221 Feb 28 15:04 EVNT.48452136._000002.pool.root.1
[2026-02-28 15:09:43] -rw-r--r--. 2 boinc boinc     15845 Feb 28 15:04 start_atlas.sh
[2026-02-28 15:09:43] drwxrwx--x. 2 boinc boinc      4096 Feb 28 15:04 shared
[2026-02-28 15:09:43] -rw-r--r--. 2 boinc boinc    597981 Feb 28 15:04 input.tar.gz
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc         0 Feb 28 15:04 boinc_lockfile
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc      2635 Feb 28 15:04 pandaJob.out
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc    998790 Feb 28 15:05 agis_schedconf.cvmfs.json
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc   1513015 Feb 28 15:05 agis_ddmendpoints.agis.ALL.json
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc       444 Feb 28 15:05 workernode_map.json
[2026-02-28 15:09:43] drwx------. 5 boinc boinc      4096 Feb 28 15:05 pilot3
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc       523 Feb 28 15:06 boinc_task_state.xml
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc       950 Feb 28 15:06 memory_monitor_summary.json
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc     21081 Feb 28 15:06 log.48843939._000042.job.log.tgz.1
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc        95 Feb 28 15:08 pilot_heartbeat.json
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc      7025 Feb 28 15:08 heartbeat.json
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc      8192 Feb 28 15:09 boinc_mmap_file
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc        22 Feb 28 15:09 wrapper_checkpoint.txt
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc      5004 Feb 28 15:09 pilotlog.txt
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc     85511 Feb 28 15:09 log.48843939._000042.job.log.1
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc       188 Feb 28 15:09 output.list
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc       620 Feb 28 15:09 runtime_log
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc    122880 Feb 28 15:09 result.tar.gz
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc      8635 Feb 28 15:09 runtime_log.err
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc       646 Feb 28 15:09 o4uMDmy9dG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmPn7KDm8Dgtdm.diag
[2026-02-28 15:09:43] -rw-r--r--. 1 boinc boinc     21778 Feb 28 15:09 stderr.txt
[2026-02-28 15:09:43] No HITS result produced
[2026-02-28 15:09:43]  *** Contents of shared directory: ***
[2026-02-28 15:09:43] total 216208
[2026-02-28 15:09:43] -rw-r--r--. 2 boinc boinc 220653221 Feb 28 15:04 ATLAS.root_0
[2026-02-28 15:09:43] -rw-r--r--. 2 boinc boinc     15845 Feb 28 15:04 start_atlas.sh
[2026-02-28 15:09:43] -rw-r--r--. 2 boinc boinc    597981 Feb 28 15:04 input.tar.gz
[2026-02-28 15:09:43] -rw-------. 1 boinc boinc    122880 Feb 28 15:09 result.tar.gz
15:09:45 (580081): run_atlas exited; CPU time 20.441982
15:09:45 (580081): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN