Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:41:27 (28314): wrapper (7.7.26015): starting
04:41:27 (28314): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 04:41:27] Arguments: --nthreads 8
[2026-03-01 04:41:27] Threads: 8
[2026-03-01 04:41:27] Checking for CVMFS
[2026-03-01 04:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 04:41:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 04:41:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 04:41:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 04:41:30] 2.11.2.0 31778 76585 132084 156755 1 55 20912157 25165824 899 130560 156 22790743 99.790 17729807 649 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-01 04:41:30] CVMFS is ok
[2026-03-01 04:41:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 04:41:30] Checking for apptainer binary...
[2026-03-01 04:41:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 04:41:30] Running /usr/bin/apptainer --version
[2026-03-01 04:41:30] apptainer version 1.3.2-1.el7
[2026-03-01 04:41:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 04:41:43] cg-vwn373.simple-grid.lan
[2026-03-01 04:41:43] apptainer works
[2026-03-01 04:41:43] Set ATHENA_PROC_NUMBER=8
[2026-03-01 04:41:43] Set ATHENA_CORE_NUMBER=8
[2026-03-01 04:41:43] Starting ATLAS job with PandaID=7033104827
[2026-03-01 04:41:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 10:57:01]  *** The last 200 lines of the pilot log: ***
[2026-03-01 10:57:01] 2026-03-01 09:56:08,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 10:57:01] 2026-03-01 09:56:08,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 10:57:01] 2026-03-01 09:56:08,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 10:57:01] 2026-03-01 09:56:08,070 | INFO     | fitting pss+swap vs Time
[2026-03-01 10:57:01] 2026-03-01 09:56:08,070 | INFO     | sum of square deviations: 14108461738.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,075 | INFO     | sum of deviations: 213335103213.99997
[2026-03-01 10:57:01] 2026-03-01 09:56:08,075 | INFO     | mean x: 1772348061.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,075 | INFO     | mean y: 2455447.1456582635
[2026-03-01 10:57:01] 2026-03-01 09:56:08,075 | INFO     | intersect: -26797351898.695244
[2026-03-01 10:57:01] 2026-03-01 09:56:08,076 | INFO     | chi2: 8.315565981759148
[2026-03-01 10:57:01] 2026-03-01 09:56:08,077 | INFO     | sum of square deviations: 13523929848.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,081 | INFO     | sum of deviations: 233723861432.00003
[2026-03-01 10:57:01] 2026-03-01 09:56:08,081 | INFO     | mean x: 1772347908.5
[2026-03-01 10:57:01] 2026-03-01 09:56:08,081 | INFO     | mean y: 2460695.7045454546
[2026-03-01 10:57:01] 2026-03-01 09:56:08,081 | INFO     | intersect: -30627689092.953915
[2026-03-01 10:57:01] 2026-03-01 09:56:08,082 | INFO     | chi2: 7.592507839481446
[2026-03-01 10:57:01] 2026-03-01 09:56:08,082 | INFO     | current chi2=7.592507839481446 (change=8.695236666557486 %)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,082 | INFO     | right removable region: 351
[2026-03-01 10:57:01] 2026-03-01 09:56:08,083 | INFO     | sum of square deviations: 13523929848.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,087 | INFO     | sum of deviations: 88335459446.00003
[2026-03-01 10:57:01] 2026-03-01 09:56:08,087 | INFO     | mean x: 1772348213.5
[2026-03-01 10:57:01] 2026-03-01 09:56:08,087 | INFO     | mean y: 2488043.9431818184
[2026-03-01 10:57:01] 2026-03-01 09:56:08,088 | INFO     | intersect: -11574116944.212172
[2026-03-01 10:57:01] 2026-03-01 09:56:08,088 | INFO     | chi2: 3.51120331868145
[2026-03-01 10:57:01] 2026-03-01 09:56:08,088 | INFO     | current chi2=3.51120331868145 (change=57.77553414423561 %)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,089 | INFO     | sum of square deviations: 12955770358.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,093 | INFO     | sum of deviations: -6094502375.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,093 | INFO     | mean x: 1772348366.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,093 | INFO     | mean y: 2513365.864553314
[2026-03-01 10:57:01] 2026-03-01 09:56:08,094 | INFO     | intersect: 836240811.4305015
[2026-03-01 10:57:01] 2026-03-01 09:56:08,094 | INFO     | chi2: 0.9129251627205797
[2026-03-01 10:57:01] 2026-03-01 09:56:08,094 | INFO     | current chi2=0.9129251627205797 (change=73.99964969663428 %)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,095 | INFO     | sum of square deviations: 12403750705.5
[2026-03-01 10:57:01] 2026-03-01 09:56:08,099 | INFO     | sum of deviations: -20134707461.500004
[2026-03-01 10:57:01] 2026-03-01 09:56:08,099 | INFO     | mean x: 1772348518.5
[2026-03-01 10:57:01] 2026-03-01 09:56:08,099 | INFO     | mean y: 2517224.821637427
[2026-03-01 10:57:01] 2026-03-01 09:56:08,099 | INFO     | intersect: 2879527557.18803
[2026-03-01 10:57:01] 2026-03-01 09:56:08,100 | INFO     | chi2: 0.8327592071584045
[2026-03-01 10:57:01] 2026-03-01 09:56:08,100 | INFO     | current chi2=0.8327592071584045 (change=8.781218749987694 %)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,100 | INFO     | left removable region: 30
[2026-03-01 10:57:01] 2026-03-01 09:56:08,101 | INFO     | sum of square deviations: 10256266720.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,104 | INFO     | sum of deviations: 11098520559.999998
[2026-03-01 10:57:01] 2026-03-01 09:56:08,105 | INFO     | mean x: 1772348793.0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,105 | INFO     | mean y: 2521080.0062305294
[2026-03-01 10:57:01] 2026-03-01 09:56:08,105 | INFO     | intersect: -1915374588.6237364
[2026-03-01 10:57:01] 2026-03-01 09:56:08,105 | INFO     | chi2: 0.0006914254029565686
[2026-03-01 10:57:01] 2026-03-01 09:56:08,106 | INFO     | current memory leak: 1.08 B/s (using 321 data points, chi2=0.00)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,107 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,107 | INFO     | ..............................
[2026-03-01 10:57:01] 2026-03-01 09:56:08,107 | INFO     | . Timing measurements:
[2026-03-01 10:57:01] 2026-03-01 09:56:08,107 | INFO     | . get job = 0 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,107 | INFO     | . initial setup = 118 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,107 | INFO     | . payload setup = 164 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,108 | INFO     | . stage-in = 0 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,108 | INFO     | . payload execution = 21888 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,108 | INFO     | . stage-out = 4 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,108 | INFO     | . log creation = 1 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,108 | INFO     | ..............................
[2026-03-01 10:57:01] 2026-03-01 09:56:08,234 | INFO     | time since job start (22075s) is within the limit (349056.0s)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,242 | INFO     | 
[2026-03-01 10:57:01] 2026-03-01 09:56:08,242 | INFO     | job summary report
[2026-03-01 10:57:01] 2026-03-01 09:56:08,242 | INFO     | --------------------------------------------------
[2026-03-01 10:57:01] 2026-03-01 09:56:08,242 | INFO     | PanDA job id: 7033104827
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | task id: 48844195
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | errors: (none)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | pilot state: finished 
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | transexitcode: 0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | exeerrorcode: 0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | exeerrordiag: 
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | exitcode: 0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,243 | INFO     | exitmsg: OK
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | cpuconsumptiontime: 83621 s
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | nevents: 400
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | neventsw: 0
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | pid: 4363
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | pgrp: 4363
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | corecount: 8
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | event service: False
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | sizes: {0: 2281260, 1: 2281946, 2: 2282407, 13: 2282407, 22056: 2316414, 22057: 2316413, 22061: 2325653, 22062: 2325791}
[2026-03-01 10:57:01] 2026-03-01 09:56:08,244 | INFO     | --------------------------------------------------
[2026-03-01 10:57:01] 2026-03-01 09:56:08,245 | INFO     | 
[2026-03-01 10:57:01] 2026-03-01 09:56:08,245 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-01 10:57:01] 2026-03-01 09:56:08,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,748 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,748 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,751 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 10:57:01] 2026-03-01 09:56:08,751 | INFO     | job 7033104827 has completed (purged errors)
[2026-03-01 10:57:01] 2026-03-01 09:56:08,751 | INFO     | overall cleanup function is called
[2026-03-01 10:57:01] 2026-03-01 09:56:08,979 | WARNING  | process 4363 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 10:57:01] 2026-03-01 09:56:09,040 | INFO     | using path: /var/lib/boinc/slots/14/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 10:57:01] 2026-03-01 09:56:09,135 | INFO     | number of running child processes to parent process 4363: 1
[2026-03-01 10:57:01] 2026-03-01 09:56:09,135 | INFO     | maximum number of monitored processes: 9
[2026-03-01 10:57:01] 2026-03-01 09:56:09,135 | INFO     | aborting job monitoring since job object (job id=7033104827) has expired
[2026-03-01 10:57:01] 2026-03-01 09:56:09,765 | INFO     | --- collectZombieJob: --- 10, [4363]
[2026-03-01 10:57:01] 2026-03-01 09:56:09,766 | INFO     | zombie collector waiting for pid 4363
[2026-03-01 10:57:01] 2026-03-01 09:56:09,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 10:57:01] 2026-03-01 09:56:09,766 | INFO     | collected zombie processes
[2026-03-01 10:57:01] 2026-03-01 09:56:09,766 | INFO     | will attempt to kill all subprocesses of pid=4363
[2026-03-01 10:57:01] 2026-03-01 09:56:09,845 | INFO     | process IDs to be killed: [4363] (in reverse order)
[2026-03-01 10:57:01] 2026-03-01 09:56:10,723 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 10:57:01] 2026-03-01 09:56:10,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 10:57:01] 2026-03-01 09:56:10,725 | INFO     | did not find any defunct processes belonging to 4363
[2026-03-01 10:57:01] 2026-03-01 09:56:10,727 | INFO     | did not find any defunct processes belonging to 4363
[2026-03-01 10:57:01] 2026-03-01 09:56:10,727 | INFO     | ready for new job
[2026-03-01 10:57:01] 2026-03-01 09:56:10,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 10:57:01] 2026-03-01 09:56:10,730 | INFO     | **************************************
[2026-03-01 10:57:01] 2026-03-01 09:56:10,730 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 10:57:01] 2026-03-01 09:56:10,730 | INFO     | **************************************
[2026-03-01 10:57:01] 2026-03-01 09:56:10,730 | INFO     | 
[2026-03-01 10:57:01] 2026-03-01 09:56:10,731 | INFO     | pilot is running in a VM
[2026-03-01 10:57:01] 2026-03-01 09:56:10,731 | INFO     | architecture information:
[2026-03-01 10:57:01] 2026-03-01 09:56:10,734 | INFO     | executing command: cat /etc/os-release
[2026-03-01 10:57:01] 2026-03-01 09:56:10,991 | INFO     | cat /etc/os-release:
[2026-03-01 10:57:01] NAME="CentOS Linux"
[2026-03-01 10:57:01] VERSION="7 (Core)"
[2026-03-01 10:57:01] ID="centos"
[2026-03-01 10:57:01] ID_LIKE="rhel fedora"
[2026-03-01 10:57:01] VERSION_ID="7"
[2026-03-01 10:57:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 10:57:01] ANSI_COLOR="0;31"
[2026-03-01 10:57:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 10:57:01] HOME_URL="https://www.centos.org/"
[2026-03-01 10:57:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 10:57:01] 
[2026-03-01 10:57:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 10:57:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 10:57:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 10:57:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 10:57:01] 
[2026-03-01 10:57:01] 2026-03-01 09:56:10,991 | INFO     | **************************************
[2026-03-01 10:57:01] 2026-03-01 09:56:11,495 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-01 10:57:01] 2026-03-01 09:56:11,796 | INFO     | sufficient remaining disk space (496985178112 B)
[2026-03-01 10:57:01] 2026-03-01 09:56:11,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 10:57:01] 2026-03-01 09:56:11,797 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 10:57:01] 2026-03-01 09:56:11,797 | INFO     | update_server=False
[2026-03-01 10:57:01] 2026-03-01 09:56:11,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 10:57:01] 2026-03-01 09:56:11,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 10:57:01] 2026-03-01 09:56:12,219 | INFO     | all payload control threads have been joined
[2026-03-01 10:57:01] 2026-03-01 09:56:12,309 | INFO     | all job control threads have been joined
[2026-03-01 10:57:01] 2026-03-01 09:56:12,477 | INFO     | all data control threads have been joined
[2026-03-01 10:57:01] 2026-03-01 09:56:12,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:57:01] 2026-03-01 09:56:12,647 | INFO     | aborting loop
[2026-03-01 10:57:01] 2026-03-01 09:56:12,803 | INFO     | [job] retrieve thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,041 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,159 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,180 | INFO     | [job] validate thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,226 | INFO     | [payload] control thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:57:01] 2026-03-01 09:56:13,316 | INFO     | [job] control thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,483 | INFO     | [data] control thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,572 | INFO     | [payload] failed_post thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,652 | INFO     | [job] job monitor thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,773 | INFO     | [data] copytool_in thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:13,805 | INFO     | [data] copytool_out thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:14,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 10:57:01] 2026-03-01 09:56:14,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:14,216 | INFO     | [payload] validate_post thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:14,267 | INFO     | [job] queue monitor thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:14,279 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:18,076 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 10:57:01] 2026-03-01 09:56:41,422 | INFO     | PID=32310 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 10:57:01] 2026-03-01 09:56:41,423 | INFO     | .. there are 2 such processes running
[2026-03-01 10:57:01] 2026-03-01 09:56:41,423 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 10:57:01] 2026-03-01 09:56:41,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 10:57:01] 2026-03-01 09:56:41,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 10:57:01] 2026-03-01 09:56:51,539 | INFO     | [monitor] cgroup control has ended
[2026-03-01 10:57:01] 2026-03-01 09:56:52,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550261528384)>', '<ExcThread(monitor, started 140549801613056)>']
[2026-03-01 10:57:01] 2026-03-01 09:56:53,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 10:57:01] 2026-03-01 09:56:53,495 | INFO     | [monitor] control thread has ended
[2026-03-01 10:57:01] 2026-03-01 09:56:57,622 | INFO     | all workflow threads have been joined
[2026-03-01 10:57:01] 2026-03-01 09:56:57,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 10:57:01] 2026-03-01 09:56:57,623 | INFO     | traces error code: 0
[2026-03-01 10:57:01] 2026-03-01 09:56:57,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 10:57:01] 2026-03-01 09:56:58,119 [wrapper] ==== pilot stdout END ====
[2026-03-01 10:57:01] 2026-03-01 09:56:58,225 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 10:57:01] 2026-03-01 09:56:58,332 [wrapper] pilotpid: 32310
[2026-03-01 10:57:01] 2026-03-01 09:56:58,444 [wrapper] Pilot exit status: 0
[2026-03-01 10:57:01] 2026-03-01 09:56:58,937 [wrapper] pandaids: 7033104827
[2026-03-01 10:57:01] 2026-03-01 09:56:59,986 [wrapper] cleanup supervisor_pilot 11169 32311
[2026-03-01 10:57:01] 2026-03-01 09:57:00,035 [wrapper] Test setup, not cleaning
[2026-03-01 10:57:01] 2026-03-01 09:57:00,122 [wrapper] apfmon messages muted
[2026-03-01 10:57:01] 2026-03-01 09:57:00,184 [wrapper] ==== wrapper stdout END ====
[2026-03-01 10:57:01] 2026-03-01 09:57:00,233 [wrapper] ==== wrapper stderr END ====
[2026-03-01 10:57:01]  *** Error codes and diagnostics ***
[2026-03-01 10:57:01]     "exeErrorCode": 0,
[2026-03-01 10:57:01]     "exeErrorDiag": "",
[2026-03-01 10:57:01]     "pilotErrorCode": 0,
[2026-03-01 10:57:01]     "pilotErrorDiag": "",
[2026-03-01 10:57:01]  *** Listing of results directory ***
[2026-03-01 10:57:01] total 457852
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc    584627 Feb 28 13:40 pilot3.tar.gz
[2026-03-01 10:57:01] -rwx------. 1 boinc boinc     36322 Feb 28 13:44 runpilot2-wrapper.sh
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc      5111 Feb 28 13:47 queuedata.json
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc       100 Mar  1 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 10:57:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 04:41 run_atlas
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc       105 Mar  1 04:41 job.xml
[2026-03-01 10:57:01] -rw-r--r--. 2 boinc boinc 251359931 Mar  1 04:41 EVNT.48452722._000001.pool.root.1
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc      6392 Mar  1 04:41 init_data.xml
[2026-03-01 10:57:01] -rw-r--r--. 2 boinc boinc     15845 Mar  1 04:41 start_atlas.sh
[2026-03-01 10:57:01] drwxrwx--x. 2 boinc boinc        68 Mar  1 04:41 shared
[2026-03-01 10:57:01] -rw-r--r--. 2 boinc boinc    597974 Mar  1 04:41 input.tar.gz
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc         0 Mar  1 04:41 boinc_lockfile
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc      2621 Mar  1 04:41 pandaJob.out
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc       415 Mar  1 04:48 workernode_map.json
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc    998790 Mar  1 04:48 agis_schedconf.cvmfs.json
[2026-03-01 10:57:01] drwx------. 5 boinc boinc      4096 Mar  1 04:48 pilot3
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc 206222601 Mar  1 10:54 HITS.48844195._000022.pool.root.1
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc       530 Mar  1 10:54 boinc_task_state.xml
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc      1011 Mar  1 10:55 memory_monitor_summary.json
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc        95 Mar  1 10:56 pilot_heartbeat.json
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc   1513015 Mar  1 10:56 agis_ddmendpoints.agis.ALL.json
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc    581978 Mar  1 10:56 log.48844195._000022.job.log.tgz.1
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc      6302 Mar  1 10:56 heartbeat.json
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc      8192 Mar  1 10:56 boinc_mmap_file
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc        28 Mar  1 10:56 wrapper_checkpoint.txt
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc      4881 Mar  1 10:56 pilotlog.txt
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc   3091071 Mar  1 10:57 log.48844195._000022.job.log.1
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc       357 Mar  1 10:57 output.list
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc       620 Mar  1 10:57 runtime_log
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc   3686400 Mar  1 10:57 result.tar.gz
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc      8832 Mar  1 10:57 runtime_log.err
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc       656 Mar  1 10:57 c4IKDmRrYG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtW5KDmx0ecrn.diag
[2026-03-01 10:57:01] -rw-r--r--. 1 boinc boinc     20770 Mar  1 10:57 stderr.txt
[2026-03-01 10:57:01] HITS file was successfully produced:
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc 206222601 Mar  1 10:54 shared/HITS.pool.root.1
[2026-03-01 10:57:01]  *** Contents of shared directory: ***
[2026-03-01 10:57:01] total 451064
[2026-03-01 10:57:01] -rw-r--r--. 2 boinc boinc 251359931 Mar  1 04:41 ATLAS.root_0
[2026-03-01 10:57:01] -rw-r--r--. 2 boinc boinc     15845 Mar  1 04:41 start_atlas.sh
[2026-03-01 10:57:01] -rw-r--r--. 2 boinc boinc    597974 Mar  1 04:41 input.tar.gz
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc 206222601 Mar  1 10:54 HITS.pool.root.1
[2026-03-01 10:57:01] -rw-------. 1 boinc boinc   3686400 Mar  1 10:57 result.tar.gz
10:57:03 (28314): run_atlas exited; CPU time 83867.222388
10:57:03 (28314): called boinc_finish(0)

</stderr_txt>
]]>

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