Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:12:20 (724701): wrapper (7.7.26015): starting
21:12:20 (724701): wrapper: running run_atlas (--nthreads 12)
[2026-02-28 21:12:20] Arguments: --nthreads 12
[2026-02-28 21:12:20] Threads: 12
[2026-02-28 21:12:20] Checking for CVMFS
[2026-02-28 21:12:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 21:12:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 21:12:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 21:12:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 21:12:22] 2.13.3.0 2238 1133 50032 156758 0 49 1948651 4096001 918 130560 0 2182331 99.700 685978 1113 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-28 21:12:22] CVMFS is ok
[2026-02-28 21:12:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 21:12:22] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-28 21:12:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-28 21:12:22] Further information can be found at the LHC@home message board.
[2026-02-28 21:12:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 21:12:22] Checking for apptainer binary...
[2026-02-28 21:12:22] apptainer is not installed, using version from CVMFS
[2026-02-28 21:12:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 21:12:22] boinc
[2026-02-28 21:12:22] apptainer works
[2026-02-28 21:12:22] Set ATHENA_PROC_NUMBER=12
[2026-02-28 21:12:22] Set ATHENA_CORE_NUMBER=12
[2026-02-28 21:12:22] Starting ATLAS job with PandaID=7033009780
[2026-02-28 21:12:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 22:30:03]  *** The last 200 lines of the pilot log: ***
[2026-02-28 22:30:03]  is_tar=False
[2026-02-28 22:30:03]  lfn=log.48843745._000044.job.log.tgz.1
[2026-02-28 22:30:03]  mtime=0
[2026-02-28 22:30:03]  protocol_id=None
[2026-02-28 22:30:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-28 22:30:03]  replicas=None
[2026-02-28 22:30:03]  scope=mc23_13p6TeV
[2026-02-28 22:30:03]  status=None
[2026-02-28 22:30:03]  status_code=0
[2026-02-28 22:30:03]  storage_token=
[2026-02-28 22:30:03]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7033009780/log.48843745._000044.job.log.tgz.1
[2026-02-28 22:30:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/cd/log.48843745._000044.job.log.tgz.1
[2026-02-28 22:30:03]  workdir=None
[2026-02-28 22:30:03] ]
[2026-02-28 22:30:03] 2026-03-01 06:29:28,214 | INFO     | transferring file log.48843745._000044.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7033009780/log.48843745._000044.job.log.tgz.1 to /var/lib/boinc
[2026-02-28 22:30:03] 2026-03-01 06:29:28,214 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7033009780/log.48843745._000044.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.488437
[2026-02-28 22:30:03] 2026-03-01 06:29:28,219 | INFO     | monitor loop #355: job 0:7033009780 is in state 'stageout'
[2026-02-28 22:30:03] 2026-03-01 06:29:28,220 | WARNING  | aborting job monitor tasks since payload process 733390 is not running
[2026-02-28 22:30:03] 2026-03-01 06:29:28,227 | INFO     | adding to output.list: log.48843745._000044.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/cd/log.48843745._000044.job.log.tg
[2026-02-28 22:30:03] 2026-03-01 06:29:28,227 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-28 22:30:03] 2026-03-01 06:29:28,227 | INFO     | summary of transferred files:
[2026-02-28 22:30:03] 2026-03-01 06:29:28,227 | INFO     |  -- lfn=log.48843745._000044.job.log.tgz.1, status_code=0, status=transferred
[2026-02-28 22:30:03] 2026-03-01 06:29:28,227 | INFO     | stage-out finished correctly
[2026-02-28 22:30:03] 2026-03-01 06:29:28,276 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 22:30:03] 2026-03-01 06:29:30,074 | INFO     | time since job start (4612s) is within the limit (349056.0s)
[2026-02-28 22:30:03] 2026-03-01 06:29:30,723 | INFO     | monitor loop #356: job 0:7033009780 is in state 'finished'
[2026-02-28 22:30:03] 2026-03-01 06:29:30,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,074 | INFO     | job 7033009780 has state=finished
[2026-02-28 22:30:03] 2026-03-01 06:29:31,074 | INFO     | preparing for final server update for job 7033009780 in state='finished'
[2026-02-28 22:30:03] 2026-03-01 06:29:31,074 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7033009780/jobReport.json
[2026-02-28 22:30:03] 2026-03-01 06:29:31,076 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-28 22:30:03] 2026-03-01 06:29:31,076 | INFO     | this job has now completed (state=finished)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,076 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,076 | INFO     | log transfer has been attempted: DONE
[2026-02-28 22:30:03] 2026-03-01 06:29:31,076 | INFO     | job 7033009780 has finished - writing final server update
[2026-02-28 22:30:03] 2026-03-01 06:29:31,076 | INFO     | total number of processed events: 400 (read)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,079 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7033009780/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,079 | INFO     | extracted standard info from prmon json
[2026-02-28 22:30:03] 2026-03-01 06:29:31,079 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 22:30:03] 2026-03-01 06:29:31,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 22:30:03] 2026-03-01 06:29:31,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 22:30:03] 2026-03-01 06:29:31,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 22:30:03] 2026-03-01 06:29:31,080 | INFO     | fitting pss+swap vs Time
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | sum of square deviations: 101843770.0
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | sum of deviations: -336491738.00000006
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | mean x: 1772344355.0
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | mean y: 2689096.6811594204
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | intersect: 5858513486.8077135
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | chi2: 0.009808740581922281
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | current memory leak: -3.30 B/s (using 69 data points, chi2=0.01)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | could have reported an average CPU frequency of 2893 MHz (6 samples)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | ..............................
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | . Timing measurements:
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | . get job = 0 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,081 | INFO     | . initial setup = 5 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,082 | INFO     | . payload setup = 3 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,082 | INFO     | . stage-in = 0 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,082 | INFO     | . payload execution = 4591 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,082 | INFO     | . stage-out = 0 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,082 | INFO     | . log creation = 0 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,082 | INFO     | ..............................
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | 
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | job summary report
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | --------------------------------------------------
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | PanDA job id: 7033009780
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | task id: 48843745
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | errors: (none)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | pilot state: finished 
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | transexitcode: 0
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | exeerrorcode: 0
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | exeerrordiag: 
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | exitcode: 0
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | exitmsg: OK
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | cpuconsumptiontime: 50531 s
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | nevents: 400
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | neventsw: 0
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | pid: 733390
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | pgrp: 733390
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | corecount: 12
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | event service: False
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | sizes: {0: 2281917, 1: 2282378, 11: 2282378, 4598: 2308646, 4599: 2317714, 4602: 2317852}
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | --------------------------------------------------
[2026-02-28 22:30:03] 2026-03-01 06:29:31,123 | INFO     | 
[2026-02-28 22:30:03] 2026-03-01 06:29:31,124 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-28 22:30:03] 2026-03-01 06:29:31,139 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | job 7033009780 has completed (purged errors)
[2026-02-28 22:30:03] 2026-03-01 06:29:31,140 | INFO     | overall cleanup function is called
[2026-02-28 22:30:03] 2026-03-01 06:29:32,147 | INFO     | --- collectZombieJob: --- 10, [733390]
[2026-02-28 22:30:03] 2026-03-01 06:29:32,148 | INFO     | zombie collector waiting for pid 733390
[2026-02-28 22:30:03] 2026-03-01 06:29:32,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 22:30:03] 2026-03-01 06:29:32,148 | INFO     | collected zombie processes
[2026-02-28 22:30:03] 2026-03-01 06:29:32,149 | INFO     | will attempt to kill all subprocesses of pid=733390
[2026-02-28 22:30:03] 2026-03-01 06:29:32,219 | INFO     | process IDs to be killed: [733390] (in reverse order)
[2026-02-28 22:30:03] 2026-03-01 06:29:32,249 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 22:30:03] 2026-03-01 06:29:32,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 22:30:03] 2026-03-01 06:29:32,251 | INFO     | did not find any defunct processes belonging to 733390
[2026-02-28 22:30:03] 2026-03-01 06:29:32,252 | INFO     | did not find any defunct processes belonging to 733390
[2026-02-28 22:30:03] 2026-03-01 06:29:32,252 | INFO     | ready for new job
[2026-02-28 22:30:03] 2026-03-01 06:29:32,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 22:30:03] 2026-03-01 06:29:32,253 | INFO     | **************************************
[2026-02-28 22:30:03] 2026-03-01 06:29:32,254 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 22:30:03] 2026-03-01 06:29:32,254 | INFO     | **************************************
[2026-02-28 22:30:03] 2026-03-01 06:29:32,254 | INFO     | 
[2026-02-28 22:30:03] 2026-03-01 06:29:32,254 | INFO     | pilot is running in a VM
[2026-02-28 22:30:03] 2026-03-01 06:29:32,254 | INFO     | architecture information:
[2026-02-28 22:30:03] 2026-03-01 06:29:32,255 | INFO     | executing command: cat /etc/os-release
[2026-02-28 22:30:03] 2026-03-01 06:29:32,264 | INFO     | cat /etc/os-release:
[2026-02-28 22:30:03] NAME="CentOS Linux"
[2026-02-28 22:30:03] VERSION="7 (Core)"
[2026-02-28 22:30:03] ID="centos"
[2026-02-28 22:30:03] ID_LIKE="rhel fedora"
[2026-02-28 22:30:03] VERSION_ID="7"
[2026-02-28 22:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 22:30:03] ANSI_COLOR="0;31"
[2026-02-28 22:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 22:30:03] HOME_URL="https://www.centos.org/"
[2026-02-28 22:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 22:30:03] 
[2026-02-28 22:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 22:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 22:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 22:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 22:30:03] 
[2026-02-28 22:30:03] 2026-03-01 06:29:32,264 | INFO     | **************************************
[2026-02-28 22:30:03] 2026-03-01 06:29:32,767 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-28 22:30:03] 2026-03-01 06:29:32,777 | INFO     | sufficient remaining disk space (2025829957632 B)
[2026-02-28 22:30:03] 2026-03-01 06:29:32,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 22:30:03] 2026-03-01 06:29:32,777 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 22:30:03] 2026-03-01 06:29:32,777 | INFO     | update_server=False
[2026-02-28 22:30:03] 2026-03-01 06:29:32,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 22:30:03] 2026-03-01 06:29:32,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 22:30:03] 2026-03-01 06:29:32,840 | INFO     | all data control threads have been joined
[2026-02-28 22:30:03] 2026-03-01 06:29:33,227 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 22:30:03] 2026-03-01 06:29:33,227 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 22:30:03] 2026-03-01 06:29:33,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 22:30:03] 2026-03-01 06:29:33,227 | INFO     | will abort loop
[2026-02-28 22:30:03] 2026-03-01 06:29:33,493 | INFO     | all payload control threads have been joined
[2026-02-28 22:30:03] 2026-03-01 06:29:33,783 | INFO     | [job] retrieve thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:33,783 | INFO     | [job] queue monitor thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:33,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 22:30:03] 2026-03-01 06:29:33,845 | INFO     | [data] control thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,233 | INFO     | [job] job monitor thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 22:30:03] 2026-03-01 06:29:34,441 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,448 | INFO     | all job control threads have been joined
[2026-02-28 22:30:03] 2026-03-01 06:29:34,498 | INFO     | [payload] control thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,601 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,632 | INFO     | [payload] failed_post thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,668 | INFO     | [job] validate thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,702 | INFO     | [data] copytool_in thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,925 | INFO     | [payload] validate_post thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:34,960 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:35,454 | INFO     | [job] control thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:35,790 | INFO     | [data] copytool_out thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:38,328 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:43,710 | INFO     | job.realtimelogging is not enabled
[2026-02-28 22:30:03] 2026-03-01 06:29:44,401 | INFO     | [monitor] cgroup control has ended
[2026-02-28 22:30:03] 2026-03-01 06:29:44,716 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 22:30:03] 2026-03-01 06:29:46,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134570941384512)>', '<ExcThread(monitor, started 134570041140992)>']
[2026-02-28 22:30:03] 2026-03-01 06:29:51,773 | INFO     | all workflow threads have been joined
[2026-02-28 22:30:03] 2026-03-01 06:29:51,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 22:30:03] 2026-03-01 06:29:51,774 | INFO     | traces error code: 0
[2026-02-28 22:30:03] 2026-03-01 06:29:51,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | INFO     | PID=728857 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | INFO     | .. there are 2 such processes running
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 22:30:03] 2026-03-01 06:30:03,268 | INFO     | [monitor] control thread has ended
[2026-02-28 22:30:03] 2026-03-01 06:30:03,358 [wrapper] ==== pilot stdout END ====
[2026-02-28 22:30:03] 2026-03-01 06:30:03,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 22:30:03] 2026-03-01 06:30:03,362 [wrapper] pilotpid: 728857
[2026-02-28 22:30:03] 2026-03-01 06:30:03,363 [wrapper] Pilot exit status: 0
[2026-02-28 22:30:03] 2026-03-01 06:30:03,370 [wrapper] pandaids: 7033009780
[2026-02-28 22:30:03] 2026-03-01 06:30:03,388 [wrapper] cleanup supervisor_pilot  765863 728858
[2026-02-28 22:30:03] 2026-03-01 06:30:03,391 [wrapper] Test setup, not cleaning
[2026-02-28 22:30:03] 2026-03-01 06:30:03,393 [wrapper] apfmon messages muted
[2026-02-28 22:30:03] 2026-03-01 06:30:03,394 [wrapper] ==== wrapper stdout END ====
[2026-02-28 22:30:03] 2026-03-01 06:30:03,396 [wrapper] ==== wrapper stderr END ====
[2026-02-28 22:30:03]  *** Error codes and diagnostics ***
[2026-02-28 22:30:03]     "exeErrorCode": 0,
[2026-02-28 22:30:03]     "exeErrorDiag": "",
[2026-02-28 22:30:03]     "pilotErrorCode": 0,
[2026-02-28 22:30:03]     "pilotErrorDiag": "",
[2026-02-28 22:30:03]  *** Listing of results directory ***
[2026-02-28 22:30:03] total 429436
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc    584627 Feb 28 04:40 pilot3.tar.gz
[2026-02-28 22:30:03] -rwx------ 1 boinc boinc     36322 Feb 28 04:42 runpilot2-wrapper.sh
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc      5111 Feb 28 04:43 queuedata.json
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc       100 Feb 28 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 22:30:03] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 21:12 run_atlas
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc       105 Feb 28 21:12 job.xml
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc      6532 Feb 28 21:12 init_data.xml
[2026-02-28 22:30:03] -rw-r--r-- 2 boinc boinc 221665294 Feb 28 21:12 EVNT.48451691._000002.pool.root.1
[2026-02-28 22:30:03] -rw-r--r-- 2 boinc boinc     15845 Feb 28 21:12 start_atlas.sh
[2026-02-28 22:30:03] drwxrwx--x 2 boinc boinc      4096 Feb 28 21:12 shared
[2026-02-28 22:30:03] -rw-r--r-- 2 boinc boinc    597972 Feb 28 21:12 input.tar.gz
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc         0 Feb 28 21:12 boinc_lockfile
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc      2617 Feb 28 21:12 pandaJob.out
[2026-02-28 22:30:03] -rw------- 1 boinc boinc    998782 Feb 28 21:12 agis_schedconf.cvmfs.json
[2026-02-28 22:30:03] -rw------- 1 boinc boinc   1513015 Feb 28 21:12 agis_ddmendpoints.agis.ALL.json
[2026-02-28 22:30:03] -rw------- 1 boinc boinc       431 Feb 28 21:12 workernode_map.json
[2026-02-28 22:30:03] drwx------ 5 boinc boinc      4096 Feb 28 21:12 pilot3
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc       529 Feb 28 22:28 boinc_task_state.xml
[2026-02-28 22:30:03] -rw------- 1 boinc boinc 211979485 Feb 28 22:29 HITS.48843745._000044.pool.root.1
[2026-02-28 22:30:03] -rw------- 1 boinc boinc        95 Feb 28 22:29 pilot_heartbeat.json
[2026-02-28 22:30:03] -rw------- 1 boinc boinc      1032 Feb 28 22:29 memory_monitor_summary.json
[2026-02-28 22:30:03] -rw------- 1 boinc boinc    392570 Feb 28 22:29 log.48843745._000044.job.log.tgz.1
[2026-02-28 22:30:03] -rw------- 1 boinc boinc      6327 Feb 28 22:29 heartbeat.json
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc      8192 Feb 28 22:30 boinc_mmap_file
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc        27 Feb 28 22:30 wrapper_checkpoint.txt
[2026-02-28 22:30:03] -rw------- 1 boinc boinc       821 Feb 28 22:30 pilotlog.txt
[2026-02-28 22:30:03] -rw------- 1 boinc boinc    698516 Feb 28 22:30 log.48843745._000044.job.log.1
[2026-02-28 22:30:03] -rw------- 1 boinc boinc       357 Feb 28 22:30 output.list
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc       620 Feb 28 22:30 runtime_log
[2026-02-28 22:30:03] -rw------- 1 boinc boinc   1105920 Feb 28 22:30 result.tar.gz
[2026-02-28 22:30:03] -rw------- 1 boinc boinc       635 Feb 28 22:30 tqiMDmspYG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDms66KDmBryIBn.diag
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc      8862 Feb 28 22:30 runtime_log.err
[2026-02-28 22:30:03] -rw-r--r-- 1 boinc boinc     21605 Feb 28 22:30 stderr.txt
[2026-02-28 22:30:03] HITS file was successfully produced:
[2026-02-28 22:30:03] -rw------- 1 boinc boinc 211979485 Feb 28 22:29 shared/HITS.pool.root.1
[2026-02-28 22:30:03]  *** Contents of shared directory: ***
[2026-02-28 22:30:03] total 425168
[2026-02-28 22:30:03] -rw-r--r-- 2 boinc boinc 221665294 Feb 28 21:12 ATLAS.root_0
[2026-02-28 22:30:03] -rw-r--r-- 2 boinc boinc     15845 Feb 28 21:12 start_atlas.sh
[2026-02-28 22:30:03] -rw-r--r-- 2 boinc boinc    597972 Feb 28 21:12 input.tar.gz
[2026-02-28 22:30:03] -rw------- 1 boinc boinc 211979485 Feb 28 22:29 HITS.pool.root.1
[2026-02-28 22:30:03] -rw------- 1 boinc boinc   1105920 Feb 28 22:30 result.tar.gz
22:30:04 (724701): run_atlas exited; CPU time 50567.548312
22:30:04 (724701): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN