Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:54:37 (3556889): wrapper (7.7.26015): starting
06:54:37 (3556889): wrapper: running run_atlas (--nthreads 3)
[2026-03-01 06:54:37] Arguments: --nthreads 3
[2026-03-01 06:54:37] Threads: 3
[2026-03-01 06:54:37] Checking for CVMFS
[2026-03-01 06:54:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 06:54:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 06:54:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 06:54:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 06:54:37] 2.9.2.0 2854294 5141 81672 156759 3 49 27031522 36864000 0 130560 0 1974072 99.980 209678 17418 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-01 06:54:37] CVMFS is ok
[2026-03-01 06:54:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 06:54:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 06:54:37] Further information can be found at the LHC@home message board.
[2026-03-01 06:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 06:54:37] Checking for apptainer binary...
[2026-03-01 06:54:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 06:54:37] Running /usr/bin/apptainer --version
[2026-03-01 06:54:37] apptainer version 1.4.1-1.1
[2026-03-01 06:54:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 06:54:37] atlasA223b
[2026-03-01 06:54:37] apptainer works
[2026-03-01 06:54:37] Set ATHENA_PROC_NUMBER=3
[2026-03-01 06:54:37] Set ATHENA_CORE_NUMBER=3
[2026-03-01 06:54:37] Starting ATLAS job with PandaID=7033007413
[2026-03-01 06:54:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 08:29:14]  *** The last 200 lines of the pilot log: ***
[2026-03-01 08:29:14] 2026-03-01 07:28:42,918 | INFO     | did not find any defunct processes belonging to 3565358
[2026-03-01 08:29:14] 2026-03-01 07:28:42,918 | INFO     | ready for new job
[2026-03-01 08:29:14] 2026-03-01 07:28:42,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 08:29:14] 2026-03-01 07:28:42,919 | INFO     | **************************************
[2026-03-01 08:29:14] 2026-03-01 07:28:42,919 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 08:29:14] 2026-03-01 07:28:42,919 | INFO     | **************************************
[2026-03-01 08:29:14] 2026-03-01 07:28:42,919 | INFO     | 
[2026-03-01 08:29:14] 2026-03-01 07:28:42,919 | INFO     | architecture information:
[2026-03-01 08:29:14] 2026-03-01 07:28:42,920 | INFO     | executing command: cat /etc/os-release
[2026-03-01 08:29:14] 2026-03-01 07:28:42,929 | INFO     | cat /etc/os-release:
[2026-03-01 08:29:14] NAME="CentOS Linux"
[2026-03-01 08:29:14] VERSION="7 (Core)"
[2026-03-01 08:29:14] ID="centos"
[2026-03-01 08:29:14] ID_LIKE="rhel fedora"
[2026-03-01 08:29:14] VERSION_ID="7"
[2026-03-01 08:29:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 08:29:14] ANSI_COLOR="0;31"
[2026-03-01 08:29:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 08:29:14] HOME_URL="https://www.centos.org/"
[2026-03-01 08:29:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 08:29:14] 
[2026-03-01 08:29:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 08:29:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 08:29:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 08:29:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 08:29:14] 
[2026-03-01 08:29:14] 2026-03-01 07:28:42,929 | INFO     | **************************************
[2026-03-01 08:29:14] 2026-03-01 07:28:43,432 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-01 08:29:14] 2026-03-01 07:28:43,445 | INFO     | sufficient remaining disk space (377364676608 B)
[2026-03-01 08:29:14] 2026-03-01 07:28:43,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 08:29:14] 2026-03-01 07:28:43,445 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 08:29:14] 2026-03-01 07:28:43,445 | INFO     | update_server=False
[2026-03-01 08:29:14] 2026-03-01 07:28:43,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 08:29:14] 2026-03-01 07:28:43,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 08:29:14] 2026-03-01 07:28:43,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 08:29:14] 2026-03-01 07:28:43,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 08:29:14] 2026-03-01 07:28:43,829 | INFO     | aborting loop
[2026-03-01 08:29:14] 2026-03-01 07:28:43,923 | INFO     | all data control threads have been joined
[2026-03-01 08:29:14] 2026-03-01 07:28:44,095 | INFO     | all payload control threads have been joined
[2026-03-01 08:29:14] 2026-03-01 07:28:44,124 | INFO     | all job control threads have been joined
[2026-03-01 08:29:14] 2026-03-01 07:28:44,451 | INFO     | [job] queue monitor thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:44,451 | INFO     | [job] retrieve thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:44,476 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:44,567 | INFO     | [payload] validate_post thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:44,835 | INFO     | [job] job monitor thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:44,929 | INFO     | [data] control thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 08:29:14] 2026-03-01 07:28:45,101 | INFO     | [payload] control thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,130 | INFO     | [job] control thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,405 | INFO     | [payload] failed_post thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,642 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,668 | INFO     | [job] validate thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,730 | INFO     | [data] copytool_out thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,735 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,744 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:45,917 | INFO     | [data] copytool_in thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:49,010 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 08:29:14] 2026-03-01 07:28:55,219 | INFO     | [monitor] cgroup control has ended
[2026-03-01 08:29:14] 2026-03-01 07:28:56,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365042939712)>', '<ExcThread(monitor, started 140364413392640)>']
[2026-03-01 08:29:14] 2026-03-01 07:29:01,250 | INFO     | all workflow threads have been joined
[2026-03-01 08:29:14] 2026-03-01 07:29:01,250 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 08:29:14] 2026-03-01 07:29:01,250 | INFO     | traces error code: 0
[2026-03-01 08:29:14] 2026-03-01 07:29:01,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 08:29:14] 2026-03-01 07:29:14,162 | INFO     | PID=3560932 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 08:29:14] 2026-03-01 07:29:14,162 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 08:29:14] 2026-03-01 07:29:14,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 08:29:14] 2026-03-01 07:29:14,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 08:29:14] 2026-03-01 07:29:14,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 08:29:14] 2026-03-01 07:29:14,163 | INFO     | [monitor] control thread has ended
[2026-03-01 08:29:14] 2026-03-01 07:29:14,210 [wrapper] ==== pilot stdout END ====
[2026-03-01 08:29:14] 2026-03-01 07:29:14,213 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 08:29:14] 2026-03-01 07:29:14,215 [wrapper] pilotpid: 3560932
[2026-03-01 08:29:14] 2026-03-01 07:29:14,218 [wrapper] Pilot exit status: 0
[2026-03-01 08:29:14] 2026-03-01 07:29:14,226 [wrapper] pandaids: 7033007413
[2026-03-01 08:29:14] 2026-03-01 07:29:14,242 [wrapper] cleanup supervisor_pilot 3570751 3560933
[2026-03-01 08:29:14] 2026-03-01 07:29:14,245 [wrapper] Test setup, not cleaning
[2026-03-01 08:29:14] 2026-03-01 07:29:14,248 [wrapper] apfmon messages muted
[2026-03-01 08:29:14] 2026-03-01 07:29:14,250 [wrapper] ==== wrapper stdout END ====
[2026-03-01 08:29:14] 2026-03-01 07:29:14,252 [wrapper] ==== wrapper stderr END ====
[2026-03-01 08:29:14]  *** Error codes and diagnostics ***
[2026-03-01 08:29:14]     "exeErrorCode": 0,
[2026-03-01 08:29:14]     "exeErrorDiag": "",
[2026-03-01 08:29:14]     "pilotErrorCode": 0,
[2026-03-01 08:29:14]     "pilotErrorDiag": "",
[2026-03-01 08:29:14]  *** Listing of results directory ***
[2026-03-01 08:29:14] total 468572
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc    584627 Feb 28 13:40 pilot3.tar.gz
[2026-03-01 08:29:14] -rwx------ 1 boinc boinc     36322 Feb 28 13:44 runpilot2-wrapper.sh
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc      5111 Feb 28 13:47 queuedata.json
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc       100 Mar  1 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 08:29:14] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 06:54 run_atlas
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc       105 Mar  1 06:54 job.xml
[2026-03-01 08:29:14] -rw-r--r-- 2 boinc boinc 269535229 Mar  1 06:54 EVNT.48343723._000051.pool.root.1
[2026-03-01 08:29:14] -rw-r--r-- 2 boinc boinc    597962 Mar  1 06:54 input.tar.gz
[2026-03-01 08:29:14] -rw-r--r-- 2 boinc boinc     15845 Mar  1 06:54 start_atlas.sh
[2026-03-01 08:29:14] drwxrwx--x 2 boinc boinc      4096 Mar  1 06:54 shared
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc         0 Mar  1 06:54 boinc_setup_complete
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc      6449 Mar  1 06:54 init_data.xml
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc         0 Mar  1 06:54 boinc_lockfile
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc      2552 Mar  1 06:54 pandaJob.out
[2026-03-01 08:29:14] -rw------- 1 boinc boinc    998782 Mar  1 06:54 agis_schedconf.cvmfs.json
[2026-03-01 08:29:14] -rw------- 1 boinc boinc   1513015 Mar  1 06:54 agis_ddmendpoints.agis.ALL.json
[2026-03-01 08:29:14] -rw------- 1 boinc boinc       419 Mar  1 06:54 workernode_map.json
[2026-03-01 08:29:14] drwx------ 5 boinc boinc      4096 Mar  1 06:54 pilot3
[2026-03-01 08:29:14] -rw------- 1 boinc boinc 204192769 Mar  1 08:28 HITS.48838551._001290.pool.root.1
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc       529 Mar  1 08:28 boinc_task_state.xml
[2026-03-01 08:29:14] -rw------- 1 boinc boinc      1014 Mar  1 08:28 memory_monitor_summary.json
[2026-03-01 08:29:14] -rw------- 1 boinc boinc    267411 Mar  1 08:28 log.48838551._001290.job.log.tgz.1
[2026-03-01 08:29:14] -rw------- 1 boinc boinc      6293 Mar  1 08:28 heartbeat.json
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc      8192 Mar  1 08:29 boinc_mmap_file
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc        27 Mar  1 08:29 wrapper_checkpoint.txt
[2026-03-01 08:29:14] -rw------- 1 boinc boinc       747 Mar  1 08:29 pilotlog.txt
[2026-03-01 08:29:14] -rw------- 1 boinc boinc        95 Mar  1 08:29 pilot_heartbeat.json
[2026-03-01 08:29:14] -rw------- 1 boinc boinc    819788 Mar  1 08:29 log.48838551._001290.job.log.1
[2026-03-01 08:29:14] -rw------- 1 boinc boinc       357 Mar  1 08:29 output.list
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc       620 Mar  1 08:29 runtime_log
[2026-03-01 08:29:14] -rw------- 1 boinc boinc   1105920 Mar  1 08:29 result.tar.gz
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc      8916 Mar  1 08:29 runtime_log.err
[2026-03-01 08:29:14] -rw------- 1 boinc boinc       661 Mar  1 08:29 2i1MDmHrYG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiA7KDmN60sEo.diag
[2026-03-01 08:29:14] -rw-r--r-- 1 boinc boinc      9642 Mar  1 08:29 stderr.txt
[2026-03-01 08:29:14] HITS file was successfully produced:
[2026-03-01 08:29:14] -rw------- 1 boinc boinc 204192769 Mar  1 08:28 shared/HITS.pool.root.1
[2026-03-01 08:29:14]  *** Contents of shared directory: ***
[2026-03-01 08:29:14] total 464316
[2026-03-01 08:29:14] -rw-r--r-- 2 boinc boinc 269535229 Mar  1 06:54 ATLAS.root_0
[2026-03-01 08:29:14] -rw-r--r-- 2 boinc boinc    597962 Mar  1 06:54 input.tar.gz
[2026-03-01 08:29:14] -rw-r--r-- 2 boinc boinc     15845 Mar  1 06:54 start_atlas.sh
[2026-03-01 08:29:14] -rw------- 1 boinc boinc 204192769 Mar  1 08:28 HITS.pool.root.1
[2026-03-01 08:29:14] -rw------- 1 boinc boinc   1105920 Mar  1 08:29 result.tar.gz
08:29:15 (3556889): run_atlas exited; CPU time 16175.745024
08:29:15 (3556889): called boinc_finish(0)

</stderr_txt>
]]>

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