Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:52:59 (3809153): wrapper (7.7.26015): starting
13:52:59 (3809153): wrapper: running run_atlas (--nthreads 12)
[2026-02-28 13:52:59] Arguments: --nthreads 12
[2026-02-28 13:52:59] Threads: 12
[2026-02-28 13:52:59] Checking for CVMFS
[2026-02-28 13:53:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 13:53:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 13:53:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 13:53:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 13:53:01] 2.11.5.0 285088 164026 236464 156745 2 554 30753095 45568001 28813 130560 0 1396865596 99.787 885732988 22659 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-28 13:53:01] CVMFS is ok
[2026-02-28 13:53:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 13:53:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 13:53:01] Further information can be found at the LHC@home message board.
[2026-02-28 13:53:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 13:53:01] Checking for apptainer binary...
[2026-02-28 13:53:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 13:53:01] Running /usr/bin/apptainer --version
[2026-02-28 13:53:01] apptainer version 1.4.1-1.el9
[2026-02-28 13:53:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 13:53:02] wns0079.triumf.lcg
[2026-02-28 13:53:02] apptainer works
[2026-02-28 13:53:02] Set ATHENA_PROC_NUMBER=12
[2026-02-28 13:53:02] Set ATHENA_CORE_NUMBER=12
[2026-02-28 13:53:02] Starting ATLAS job with PandaID=7033533033
[2026-02-28 13:53:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 13:58:02]  *** The last 200 lines of the pilot log: ***
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | INFO     | will not add max space = 0 B to job metrics
[2026-02-28 13:58:02] 2026-02-28 21:57:08,786 | WARNING  | wrong length of table data, x=[1772315679.0], y=[906.0] (must be same and length>=4)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,786 | INFO     | could have reported an average CPU frequency of 2786 MHz (4 samples)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | ..............................
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . Timing measurements:
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . get job = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . initial setup = 25 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . payload setup = 16 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . stage-in = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . payload execution = 39 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . stage-out = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . log creation = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | ..............................
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033533033/pilotlog.txt
[2026-02-28 13:58:02] 2026-02-28 21:57:08,871 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-28 13:58:02] - Log from pilotlog.txt -
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | found no stored workdir sizes
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | INFO     | will not add max space = 0 B to job metrics
[2026-02-28 13:58:02] 2026-02-28 21:57:08,786 | WARNING  | wrong length of table data, x=[1772315679.0], y=[906.0] (must be same and length>=4)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,786 | INFO     | could have reported an average CPU frequency of 2786 MHz (4 samples)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | ..............................
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . Timing measurements:
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . get job = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . initial setup = 25 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . payload setup = 16 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . stage-in = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . payload execution = 39 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . stage-out = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . log creation = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | ..............................
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033533033/pilotlog.txt
[2026-02-28 13:58:02] 2026-02-28 21:57:08,872 | WARNING  | 
[2026-02-28 13:58:02] [begin log extracts]
[2026-02-28 13:58:02] - Log from pilotlog.txt -
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | WARNING  | found no stored workdir sizes
[2026-02-28 13:58:02] 2026-02-28 21:57:08,772 | INFO     | will not add max space = 0 B to job metrics
[2026-02-28 13:58:02] 2026-02-28 21:57:08,786 | WARNING  | wrong length of table data, x=[1772315679.0], y=[906.0] (must be same and length>=4)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,786 | INFO     | could have reported an average CPU frequency of 2786 MHz (4 samples)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | ..............................
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . Timing measurements:
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . get job = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . initial setup = 25 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . payload setup = 16 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . stage-in = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . payload execution = 39 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . stage-out = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | . log creation = 0 s
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | ..............................
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 13:58:02] 2026-02-28 21:57:08,787 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033533033/pilotlog.txt
[2026-02-28 13:58:02] [end log extracts]
[2026-02-28 13:58:02] 2026-02-28 21:57:08,872 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-28 13:58:02] 2026-02-28 21:57:08,873 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | 
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | job summary report
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | --------------------------------------------------
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | PanDA job id: 7033533033
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | task id: 48838462
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-28 13:55:01,672 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | pilot state: failed 
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | transexitcode: 65
[2026-02-28 13:58:02] 2026-02-28 21:57:09,033 | INFO     | exeerrorcode: 65
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | exitcode: 65
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | cpuconsumptiontime: 13 s
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | nevents: 0
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | neventsw: 0
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | pid: 3827893
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | pgrp: 3827893
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | corecount: 12
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | event service: False
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | sizes: {0: 2281782, 1: 2281866, 2: 2282327, 13: 2282327, 59: 2305530, 61: 2309978, 179: 2310116}
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | --------------------------------------------------
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | 
[2026-02-28 13:58:02] 2026-02-28 21:57:09,034 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-28 13:58:02] 2026-02-28 21:57:09,052 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,052 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,052 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,052 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 13:58:02] 2026-02-28 21:57:09,053 | INFO     | job 7033533033 has completed (purged errors)
[2026-02-28 13:58:02] 2026-02-28 21:57:09,054 | INFO     | overall cleanup function is called
[2026-02-28 13:58:02] 2026-02-28 21:57:10,063 | INFO     | --- collectZombieJob: --- 10, [3827893]
[2026-02-28 13:58:02] 2026-02-28 21:57:10,063 | INFO     | zombie collector waiting for pid 3827893
[2026-02-28 13:58:02] 2026-02-28 21:57:10,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 13:58:02] 2026-02-28 21:57:10,064 | INFO     | collected zombie processes
[2026-02-28 13:58:02] 2026-02-28 21:57:10,064 | INFO     | will attempt to kill all subprocesses of pid=3827893
[2026-02-28 13:58:02] 2026-02-28 21:57:10,813 | INFO     | process IDs to be killed: [3827893] (in reverse order)
[2026-02-28 13:58:02] 2026-02-28 21:57:10,932 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 13:58:02] 2026-02-28 21:57:10,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 13:58:02] 2026-02-28 21:57:10,942 | INFO     | did not find any defunct processes belonging to 3827893
[2026-02-28 13:58:02] 2026-02-28 21:57:10,951 | INFO     | did not find any defunct processes belonging to 3827893
[2026-02-28 13:58:02] 2026-02-28 21:57:10,951 | INFO     | ready for new job
[2026-02-28 13:58:02] 2026-02-28 21:57:10,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 13:58:02] 2026-02-28 21:57:10,953 | INFO     | **************************************
[2026-02-28 13:58:02] 2026-02-28 21:57:10,953 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 13:58:02] 2026-02-28 21:57:10,953 | INFO     | **************************************
[2026-02-28 13:58:02] 2026-02-28 21:57:10,953 | INFO     | 
[2026-02-28 13:58:02] 2026-02-28 21:57:10,955 | INFO     | architecture information:
[2026-02-28 13:58:02] 2026-02-28 21:57:10,955 | INFO     | executing command: cat /etc/os-release
[2026-02-28 13:58:02] 2026-02-28 21:57:10,966 | INFO     | cat /etc/os-release:
[2026-02-28 13:58:02] NAME="CentOS Linux"
[2026-02-28 13:58:02] VERSION="7 (Core)"
[2026-02-28 13:58:02] ID="centos"
[2026-02-28 13:58:02] ID_LIKE="rhel fedora"
[2026-02-28 13:58:02] VERSION_ID="7"
[2026-02-28 13:58:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 13:58:02] ANSI_COLOR="0;31"
[2026-02-28 13:58:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 13:58:02] HOME_URL="https://www.centos.org/"
[2026-02-28 13:58:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 13:58:02] 
[2026-02-28 13:58:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 13:58:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 13:58:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 13:58:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 13:58:02] 
[2026-02-28 13:58:02] 2026-02-28 21:57:10,966 | INFO     | **************************************
[2026-02-28 13:58:02] 2026-02-28 21:57:11,470 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-28 13:58:02] 2026-02-28 21:57:11,544 | INFO     | sufficient remaining disk space (2154105405440 B)
[2026-02-28 13:58:02] 2026-02-28 21:57:11,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 13:58:02] 2026-02-28 21:57:11,545 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 13:58:02] 2026-02-28 21:57:11,545 | INFO     | update_server=False
[2026-02-28 13:58:02] 2026-02-28 21:57:11,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 13:58:02] 2026-02-28 21:57:11,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 13:58:02] 2026-02-28 21:57:11,699 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 13:58:02] 2026-02-28 21:57:11,699 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 13:58:02] 2026-02-28 21:57:11,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:58:02] 2026-02-28 21:57:11,699 | INFO     | will abort loop
[2026-02-28 13:58:02] 2026-02-28 21:57:12,141 | INFO     | all payload control threads have been joined
[2026-02-28 13:58:02] 2026-02-28 21:57:12,189 | INFO     | all data control threads have been joined
[2026-02-28 13:58:02] 2026-02-28 21:57:12,551 | INFO     | [job] retrieve thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:12,563 | INFO     | [data] copytool_in thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:12,705 | INFO     | [job] job monitor thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:12,868 | INFO     | [payload] failed_post thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,103 | INFO     | all job control threads have been joined
[2026-02-28 13:58:02] 2026-02-28 21:57:13,147 | INFO     | [payload] control thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,195 | INFO     | [data] control thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,199 | INFO     | [job] validate thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,533 | INFO     | [payload] validate_post thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,705 | INFO     | [data] copytool_out thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,911 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:13,913 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:14,022 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:14,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:58:02] 2026-02-28 21:57:14,109 | INFO     | [job] control thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:14,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 13:58:02] 2026-02-28 21:57:15,052 | INFO     | [job] queue monitor thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:18,393 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 13:58:02] 2026-02-28 21:57:42,305 | INFO     | PID=3821184 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 13:58:02] 2026-02-28 21:57:42,306 | INFO     | .. there are 49 such processes running
[2026-02-28 13:58:02] 2026-02-28 21:57:42,306 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 13:58:02] 2026-02-28 21:57:42,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 13:58:02] 2026-02-28 21:57:42,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 13:58:02] 2026-02-28 21:57:56,230 | INFO     | [monitor] cgroup control has ended
[2026-02-28 13:58:02] 2026-02-28 21:57:56,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755152779072)>', '<ExcThread(monitor, started 139754832107264)>']
[2026-02-28 13:58:02] 2026-02-28 21:57:57,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 13:58:02] 2026-02-28 21:57:57,396 | INFO     | [monitor] control thread has ended
[2026-02-28 13:58:02] 2026-02-28 21:58:01,537 | INFO     | all workflow threads have been joined
[2026-02-28 13:58:02] 2026-02-28 21:58:01,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 13:58:02] 2026-02-28 21:58:01,539 | INFO     | traces error code: 0
[2026-02-28 13:58:02] 2026-02-28 21:58:01,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 13:58:02] 2026-02-28 21:58:02,041 [wrapper] ==== pilot stdout END ====
[2026-02-28 13:58:02] 2026-02-28 21:58:02,087 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 13:58:02] 2026-02-28 21:58:02,111 [wrapper] pilotpid: 3821184
[2026-02-28 13:58:02] 2026-02-28 21:58:02,121 [wrapper] Pilot exit status: 0
[2026-02-28 13:58:02] 2026-02-28 21:58:02,209 [wrapper] pandaids: 7033533033
[2026-02-28 13:58:02] 2026-02-28 21:58:02,441 [wrapper] cleanup supervisor_pilot 3821197 3821185
[2026-02-28 13:58:02] 2026-02-28 21:58:02,443 [wrapper] Test setup, not cleaning
[2026-02-28 13:58:02] 2026-02-28 21:58:02,448 [wrapper] apfmon messages muted
[2026-02-28 13:58:02] 2026-02-28 21:58:02,458 [wrapper] ==== wrapper stdout END ====
[2026-02-28 13:58:02] 2026-02-28 21:58:02,460 [wrapper] ==== wrapper stderr END ====
[2026-02-28 13:58:03]  *** Error codes and diagnostics ***
[2026-02-28 13:58:03]     "exeErrorCode": 65,
[2026-02-28 13:58:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-28 13:58:03]     "pilotErrorCode": 1305,
[2026-02-28 13:58:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-28 13:58:03]  *** Listing of results directory ***
[2026-02-28 13:58:03] total 275724
[2026-02-28 13:58:03] -rwx------. 1 boinc boinc     36322 Feb 28 08:02 runpilot2-wrapper.sh
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc      5111 Feb 28 08:04 queuedata.json
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc    584627 Feb 28 08:04 pilot3.tar.gz
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc       100 Feb 28 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 13:58:03] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 13:52 run_atlas
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc       105 Feb 28 13:52 job.xml
[2026-02-28 13:58:03] -rw-r--r--. 2 boinc boinc 278205450 Feb 28 13:52 EVNT.48220133._000110.pool.root.1
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc      6593 Feb 28 13:52 init_data.xml
[2026-02-28 13:58:03] -rw-r--r--. 2 boinc boinc    597973 Feb 28 13:52 input.tar.gz
[2026-02-28 13:58:03] -rw-r--r--. 2 boinc boinc     15845 Feb 28 13:52 start_atlas.sh
[2026-02-28 13:58:03] drwxrwx--x. 2 boinc boinc      4096 Feb 28 13:52 shared
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc         0 Feb 28 13:52 boinc_lockfile
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc      2562 Feb 28 13:53 pandaJob.out
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc    998790 Feb 28 13:53 agis_schedconf.cvmfs.json
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc   1513015 Feb 28 13:53 agis_ddmendpoints.agis.ALL.json
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc       445 Feb 28 13:53 workernode_map.json
[2026-02-28 13:58:03] drwx------. 5 boinc boinc      4096 Feb 28 13:53 pilot3
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc       965 Feb 28 13:55 memory_monitor_summary.json
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc     21554 Feb 28 13:55 log.48838462._002806.job.log.tgz.1
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc      7006 Feb 28 13:57 heartbeat.json
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc        95 Feb 28 13:57 pilot_heartbeat.json
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc       524 Feb 28 13:57 boinc_task_state.xml
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc        22 Feb 28 13:58 wrapper_checkpoint.txt
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc      5005 Feb 28 13:58 pilotlog.txt
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc      8192 Feb 28 13:58 boinc_mmap_file
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc     83907 Feb 28 13:58 log.48838462._002806.job.log.1
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc       188 Feb 28 13:58 output.list
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc       620 Feb 28 13:58 runtime_log
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc    122880 Feb 28 13:58 result.tar.gz
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc      8635 Feb 28 13:58 runtime_log.err
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc       643 Feb 28 13:58 GrINDmjwbG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSx5KDmpg1Fmn.diag
[2026-02-28 13:58:03] -rw-r--r--. 1 boinc boinc     21676 Feb 28 13:58 stderr.txt
[2026-02-28 13:58:03] No HITS result produced
[2026-02-28 13:58:03]  *** Contents of shared directory: ***
[2026-02-28 13:58:03] total 272412
[2026-02-28 13:58:03] -rw-r--r--. 2 boinc boinc 278205450 Feb 28 13:52 ATLAS.root_0
[2026-02-28 13:58:03] -rw-r--r--. 2 boinc boinc    597973 Feb 28 13:52 input.tar.gz
[2026-02-28 13:58:03] -rw-r--r--. 2 boinc boinc     15845 Feb 28 13:52 start_atlas.sh
[2026-02-28 13:58:03] -rw-------. 1 boinc boinc    122880 Feb 28 13:58 result.tar.gz
13:58:04 (3809153): run_atlas exited; CPU time 20.486511
13:58:04 (3809153): called boinc_finish(0)

</stderr_txt>
]]>

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