Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:19:51 (727407): wrapper (7.7.26015): starting
12:19:51 (727407): wrapper: running run_atlas (--nthreads 3)
[2026-03-01 12:19:51] Arguments: --nthreads 3
[2026-03-01 12:19:51] Threads: 3
[2026-03-01 12:19:51] Checking for CVMFS
[2026-03-01 12:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 12:19:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 12:19:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 12:19:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 12:19:51] 2.9.2.0 43448 5488 82180 156768 1 49 32760722 36864000 0 130560 0 1902597 99.978 218254 11522 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-01 12:19:51] CVMFS is ok
[2026-03-01 12:19:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 12:19:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 12:19:51] Further information can be found at the LHC@home message board.
[2026-03-01 12:19:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 12:19:51] Checking for apptainer binary...
[2026-03-01 12:19:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 12:19:51] Running /usr/bin/apptainer --version
[2026-03-01 12:19:51] apptainer version 1.4.1-1.1
[2026-03-01 12:19:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 12:19:51] cosA127b
[2026-03-01 12:19:51] apptainer works
[2026-03-01 12:19:51] Set ATHENA_PROC_NUMBER=3
[2026-03-01 12:19:51] Set ATHENA_CORE_NUMBER=3
[2026-03-01 12:19:51] Starting ATLAS job with PandaID=7032959104
[2026-03-01 12:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 15:42:21]  *** The last 200 lines of the pilot log: ***
[2026-03-01 15:42:21] 2026-03-01 14:41:40,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 15:42:21] 2026-03-01 14:41:40,863 | INFO     | all data control threads have been joined
[2026-03-01 15:42:21] 2026-03-01 14:41:41,059 | WARNING  | process 735880 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 15:42:21] 2026-03-01 14:41:41,086 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 15:42:21] 2026-03-01 14:41:41,090 | INFO     | all job control threads have been joined
[2026-03-01 15:42:21] 2026-03-01 14:41:41,122 | INFO     | number of running child processes to parent process 735880: 1
[2026-03-01 15:42:21] 2026-03-01 14:41:41,122 | INFO     | maximum number of monitored processes: 6
[2026-03-01 15:42:21] 2026-03-01 14:41:41,122 | INFO     | aborting job monitoring since job object (job id=7032959104) has expired
[2026-03-01 15:42:21] 2026-03-01 14:41:41,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 15:42:21] 2026-03-01 14:41:41,122 | INFO     | will abort loop
[2026-03-01 15:42:21] 2026-03-01 14:41:41,301 | INFO     | all payload control threads have been joined
[2026-03-01 15:42:21] 2026-03-01 14:41:41,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 15:42:21] 2026-03-01 14:41:41,616 | INFO     | [job] queue monitor thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:41,616 | INFO     | [job] retrieve thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:41,826 | INFO     | [payload] failed_post thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:41,869 | INFO     | [data] control thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,026 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,061 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,096 | INFO     | [job] control thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,127 | INFO     | [job] job monitor thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,307 | INFO     | [payload] control thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,456 | INFO     | [payload] validate_post thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,573 | INFO     | [job] validate thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,608 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,622 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:42,862 | INFO     | [data] copytool_in thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:43,352 | INFO     | [data] copytool_out thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:41:44,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 15:42:21] 2026-03-01 14:41:48,020 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 15:42:21] 2026-03-01 14:42:11,195 | INFO     | PID=731445 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 15:42:21] 2026-03-01 14:42:11,196 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 15:42:21] 2026-03-01 14:42:11,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 15:42:21] 2026-03-01 14:42:11,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 15:42:21] 2026-03-01 14:42:14,761 | INFO     | [monitor] cgroup control has ended
[2026-03-01 15:42:21] 2026-03-01 14:42:16,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736756324160)>', '<ExcThread(monitor, started 139735745947392)>']
[2026-03-01 15:42:21] 2026-03-01 14:42:17,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 15:42:21] 2026-03-01 14:42:17,223 | INFO     | [monitor] control thread has ended
[2026-03-01 15:42:21] 2026-03-01 14:42:21,495 | INFO     | all workflow threads have been joined
[2026-03-01 15:42:21] 2026-03-01 14:42:21,496 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 15:42:21] 2026-03-01 14:42:21,496 | INFO     | traces error code: 0
[2026-03-01 15:42:21] 2026-03-01 14:42:21,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 15:42:21] 2026-03-01 14:42:21,545 [wrapper] ==== pilot stdout END ====
[2026-03-01 15:42:21] 2026-03-01 14:42:21,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 15:42:21] 2026-03-01 14:42:21,550 [wrapper] pilotpid: 731445
[2026-03-01 15:42:21] 2026-03-01 14:42:21,552 [wrapper] Pilot exit status: 0
[2026-03-01 15:42:21] 2026-03-01 14:42:21,559 [wrapper] pandaids: 7032959104
[2026-03-01 15:42:21] 2026-03-01 14:42:21,575 [wrapper] cleanup supervisor_pilot  743195 731446
[2026-03-01 15:42:21] 2026-03-01 14:42:21,577 [wrapper] Test setup, not cleaning
[2026-03-01 15:42:21] 2026-03-01 14:42:21,580 [wrapper] apfmon messages muted
[2026-03-01 15:42:21] 2026-03-01 14:42:21,582 [wrapper] ==== wrapper stdout END ====
[2026-03-01 15:42:21] 2026-03-01 14:42:21,584 [wrapper] ==== wrapper stderr END ====
[2026-03-01 15:42:21]  *** Error codes and diagnostics ***
[2026-03-01 15:42:21]     "exeErrorCode": 0,
[2026-03-01 15:42:21]     "exeErrorDiag": "",
[2026-03-01 15:42:21]     "pilotErrorCode": 0,
[2026-03-01 15:42:21]     "pilotErrorDiag": "",
[2026-03-01 15:42:21]  *** Listing of results directory ***
[2026-03-01 15:42:21] total 599224
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc    584627 Feb 28 11:26 pilot3.tar.gz
[2026-03-01 15:42:21] -rwx------ 1 boinc boinc     36322 Feb 28 11:30 runpilot2-wrapper.sh
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc      5111 Feb 28 11:31 queuedata.json
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc       100 Mar  1 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 15:42:21] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 12:19 run_atlas
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc       105 Mar  1 12:19 job.xml
[2026-03-01 15:42:21] -rw-r--r-- 2 boinc boinc 294945786 Mar  1 12:19 EVNT.48448685._000001.pool.root.1
[2026-03-01 15:42:21] -rw-r--r-- 2 boinc boinc    597962 Mar  1 12:19 input.tar.gz
[2026-03-01 15:42:21] -rw-r--r-- 2 boinc boinc     15845 Mar  1 12:19 start_atlas.sh
[2026-03-01 15:42:21] drwxrwx--x 2 boinc boinc      4096 Mar  1 12:19 shared
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc         0 Mar  1 12:19 boinc_setup_complete
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc      6442 Mar  1 12:19 init_data.xml
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc         0 Mar  1 12:19 boinc_lockfile
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc      2608 Mar  1 12:19 pandaJob.out
[2026-03-01 15:42:21] -rw------- 1 boinc boinc    998184 Mar  1 12:19 agis_schedconf.cvmfs.json
[2026-03-01 15:42:21] -rw------- 1 boinc boinc       429 Mar  1 12:20 workernode_map.json
[2026-03-01 15:42:21] drwx------ 5 boinc boinc      4096 Mar  1 12:20 pilot3
[2026-03-01 15:42:21] -rw------- 1 boinc boinc 310620973 Mar  1 15:41 HITS.48842579._000014.pool.root.1
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc       530 Mar  1 15:41 boinc_task_state.xml
[2026-03-01 15:42:21] -rw------- 1 boinc boinc      1021 Mar  1 15:41 memory_monitor_summary.json
[2026-03-01 15:42:21] -rw------- 1 boinc boinc   1513015 Mar  1 15:41 agis_ddmendpoints.agis.ALL.json
[2026-03-01 15:42:21] -rw------- 1 boinc boinc    355546 Mar  1 15:41 log.48842579._000014.job.log.tgz.1
[2026-03-01 15:42:21] -rw------- 1 boinc boinc      6313 Mar  1 15:41 heartbeat.json
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc      8192 Mar  1 15:42 boinc_mmap_file
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc        28 Mar  1 15:42 wrapper_checkpoint.txt
[2026-03-01 15:42:21] -rw------- 1 boinc boinc        95 Mar  1 15:42 pilot_heartbeat.json
[2026-03-01 15:42:21] -rw------- 1 boinc boinc      5269 Mar  1 15:42 pilotlog.txt
[2026-03-01 15:42:21] -rw------- 1 boinc boinc   1707190 Mar  1 15:42 log.48842579._000014.job.log.1
[2026-03-01 15:42:21] -rw------- 1 boinc boinc       357 Mar  1 15:42 output.list
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc       620 Mar  1 15:42 runtime_log
[2026-03-01 15:42:21] -rw------- 1 boinc boinc   2078720 Mar  1 15:42 result.tar.gz
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc      8907 Mar  1 15:42 runtime_log.err
[2026-03-01 15:42:21] -rw------- 1 boinc boinc       662 Mar  1 15:42 nqVKDmQlWG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZF5KDmlvngem.diag
[2026-03-01 15:42:21] -rw-r--r-- 1 boinc boinc      7824 Mar  1 15:42 stderr.txt
[2026-03-01 15:42:21] HITS file was successfully produced:
[2026-03-01 15:42:21] -rw------- 1 boinc boinc 310620973 Mar  1 15:41 shared/HITS.pool.root.1
[2026-03-01 15:42:21]  *** Contents of shared directory: ***
[2026-03-01 15:42:21] total 594020
[2026-03-01 15:42:21] -rw-r--r-- 2 boinc boinc 294945786 Mar  1 12:19 ATLAS.root_0
[2026-03-01 15:42:21] -rw-r--r-- 2 boinc boinc    597962 Mar  1 12:19 input.tar.gz
[2026-03-01 15:42:21] -rw-r--r-- 2 boinc boinc     15845 Mar  1 12:19 start_atlas.sh
[2026-03-01 15:42:21] -rw------- 1 boinc boinc 310620973 Mar  1 15:41 HITS.pool.root.1
[2026-03-01 15:42:21] -rw------- 1 boinc boinc   2078720 Mar  1 15:42 result.tar.gz
15:42:22 (727407): run_atlas exited; CPU time 35415.228337
15:42:22 (727407): called boinc_finish(0)

</stderr_txt>
]]>

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