Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:05:10 (12219): wrapper (7.7.26015): starting
11:05:10 (12219): wrapper: running run_atlas (--nthreads 12)
[2026-02-28 11:05:10] Arguments: --nthreads 12
[2026-02-28 11:05:10] Threads: 12
[2026-02-28 11:05:10] Checking for CVMFS
[2026-02-28 11:05:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 11:05:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 11:05:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 11:05:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 11:05:10] 2.11.2.0 2991 423212 101016 156737 0 52 15785162 20275201 1 130560 1 180908893 99.949 25266996 17406 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-28 11:05:10] CVMFS is ok
[2026-02-28 11:05:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 11:05:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 11:05:10] Further information can be found at the LHC@home message board.
[2026-02-28 11:05:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 11:05:10] Checking for apptainer binary...
[2026-02-28 11:05:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 11:05:10] Running /usr/bin/apptainer --version
[2026-02-28 11:05:10] apptainer version 1.3.2-1.el7
[2026-02-28 11:05:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 11:05:12] c-205-32.aglt2.org
[2026-02-28 11:05:12] apptainer works
[2026-02-28 11:05:12] Set ATHENA_PROC_NUMBER=12
[2026-02-28 11:05:12] Set ATHENA_CORE_NUMBER=12
[2026-02-28 11:05:12] Starting ATLAS job with PandaID=7032912758
[2026-02-28 11:05:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 12:13:54]  *** The last 200 lines of the pilot log: ***
[2026-02-28 12:13:54]  filetype=log
[2026-02-28 12:13:54]  guid=8d80b211-d82b-4c05-b852-8b457b5add4c
[2026-02-28 12:13:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-28 12:13:54]  is_altstaged=None
[2026-02-28 12:13:54]  is_tar=False
[2026-02-28 12:13:54]  lfn=log.48843629._000017.job.log.tgz.1
[2026-02-28 12:13:54]  mtime=0
[2026-02-28 12:13:54]  protocol_id=None
[2026-02-28 12:13:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-28 12:13:54]  replicas=None
[2026-02-28 12:13:54]  scope=mc23_13p6TeV
[2026-02-28 12:13:54]  status=None
[2026-02-28 12:13:54]  status_code=0
[2026-02-28 12:13:54]  storage_token=
[2026-02-28 12:13:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7032912758/log.48843629._000017.job.log.tgz.1
[2026-02-28 12:13:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/01/log.48843629._000017.job.log.tgz.1
[2026-02-28 12:13:54]  workdir=None
[2026-02-28 12:13:54] ]
[2026-02-28 12:13:54] 2026-02-28 17:13:20,032 | INFO     | transferring file log.48843629._000017.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7032912758/log.48843629._000017.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-28 12:13:54] 2026-02-28 17:13:20,033 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7032912758/log.48843629._000017.job.log.tgz.1 /tmp/boinchome/slots/0/log.48843629._000017.job
[2026-02-28 12:13:54] 2026-02-28 17:13:20,052 | INFO     | adding to output.list: log.48843629._000017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/01/log.48843629._000017.job.log.tg
[2026-02-28 12:13:54] 2026-02-28 17:13:20,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-28 12:13:54] 2026-02-28 17:13:20,053 | INFO     | summary of transferred files:
[2026-02-28 12:13:54] 2026-02-28 17:13:20,053 | INFO     |  -- lfn=log.48843629._000017.job.log.tgz.1, status_code=0, status=transferred
[2026-02-28 12:13:54] 2026-02-28 17:13:20,053 | INFO     | stage-out finished correctly
[2026-02-28 12:13:54] 2026-02-28 17:13:20,836 | INFO     | time since job start (4069s) is within the limit (349056.0s)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 12:13:54] 2026-02-28 17:13:22,720 | INFO     | job 7032912758 has state=finished
[2026-02-28 12:13:54] 2026-02-28 17:13:22,720 | INFO     | preparing for final server update for job 7032912758 in state='finished'
[2026-02-28 12:13:54] 2026-02-28 17:13:22,720 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7032912758/jobReport.json
[2026-02-28 12:13:54] 2026-02-28 17:13:22,722 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-28 12:13:54] 2026-02-28 17:13:22,722 | INFO     | this job has now completed (state=finished)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,722 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,723 | INFO     | log transfer has been attempted: DONE
[2026-02-28 12:13:54] 2026-02-28 17:13:22,723 | INFO     | job 7032912758 has finished - writing final server update
[2026-02-28 12:13:54] 2026-02-28 17:13:22,723 | INFO     | total number of processed events: 400 (read)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,724 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7032912758/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,725 | INFO     | extracted standard info from prmon json
[2026-02-28 12:13:54] 2026-02-28 17:13:22,725 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 12:13:54] 2026-02-28 17:13:22,725 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 12:13:54] 2026-02-28 17:13:22,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 12:13:54] 2026-02-28 17:13:22,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 12:13:54] 2026-02-28 17:13:22,727 | INFO     | fitting pss+swap vs Time
[2026-02-28 12:13:54] 2026-02-28 17:13:22,727 | INFO     | sum of square deviations: 66959395.0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,727 | INFO     | sum of deviations: -1331840877.0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,727 | INFO     | mean x: 1772296858.5
[2026-02-28 12:13:54] 2026-02-28 17:13:22,727 | INFO     | mean y: 2670969.3666666667
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | intersect: 35254145423.832466
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | chi2: 0.05188201734320084
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | current memory leak: -19.89 B/s (using 60 data points, chi2=0.05)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | could have reported an average CPU frequency of 1751 MHz (6 samples)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | ..............................
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | . Timing measurements:
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | . get job = 0 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,728 | INFO     | . initial setup = 7 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,729 | INFO     | . payload setup = 6 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,729 | INFO     | . stage-in = 0 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,729 | INFO     | . payload execution = 4045 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,729 | INFO     | . stage-out = 0 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,729 | INFO     | . log creation = 0 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,729 | INFO     | ..............................
[2026-02-28 12:13:54] 2026-02-28 17:13:22,803 | INFO     | 
[2026-02-28 12:13:54] 2026-02-28 17:13:22,803 | INFO     | job summary report
[2026-02-28 12:13:54] 2026-02-28 17:13:22,803 | INFO     | --------------------------------------------------
[2026-02-28 12:13:54] 2026-02-28 17:13:22,803 | INFO     | PanDA job id: 7032912758
[2026-02-28 12:13:54] 2026-02-28 17:13:22,804 | INFO     | task id: 48843629
[2026-02-28 12:13:54] 2026-02-28 17:13:22,804 | INFO     | errors: (none)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 12:13:54] 2026-02-28 17:13:22,804 | INFO     | pilot state: finished 
[2026-02-28 12:13:54] 2026-02-28 17:13:22,804 | INFO     | transexitcode: 0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,804 | INFO     | exeerrorcode: 0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,805 | INFO     | exeerrordiag: 
[2026-02-28 12:13:54] 2026-02-28 17:13:22,805 | INFO     | exitcode: 0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,805 | INFO     | exitmsg: OK
[2026-02-28 12:13:54] 2026-02-28 17:13:22,805 | INFO     | cpuconsumptiontime: 38956 s
[2026-02-28 12:13:54] 2026-02-28 17:13:22,805 | INFO     | nevents: 400
[2026-02-28 12:13:54] 2026-02-28 17:13:22,805 | INFO     | neventsw: 0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | pid: 20459
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | pgrp: 20459
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | corecount: 12
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | event service: False
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | sizes: {0: 2281842, 1: 2282359, 12: 2282359, 4055: 2308235, 4057: 2317233, 4060: 2317611}
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | --------------------------------------------------
[2026-02-28 12:13:54] 2026-02-28 17:13:22,806 | INFO     | 
[2026-02-28 12:13:54] 2026-02-28 17:13:22,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-28 12:13:54] 2026-02-28 17:13:22,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 12:13:54] 2026-02-28 17:13:22,841 | INFO     | job 7032912758 has completed (purged errors)
[2026-02-28 12:13:54] 2026-02-28 17:13:22,841 | INFO     | overall cleanup function is called
[2026-02-28 12:13:54] 2026-02-28 17:13:23,845 | INFO     | --- collectZombieJob: --- 10, [20459]
[2026-02-28 12:13:54] 2026-02-28 17:13:23,845 | INFO     | zombie collector waiting for pid 20459
[2026-02-28 12:13:54] 2026-02-28 17:13:23,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 12:13:54] 2026-02-28 17:13:23,854 | INFO     | collected zombie processes
[2026-02-28 12:13:54] 2026-02-28 17:13:23,854 | INFO     | will attempt to kill all subprocesses of pid=20459
[2026-02-28 12:13:54] 2026-02-28 17:13:23,974 | WARNING  | process 20459 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 12:13:54] 2026-02-28 17:13:24,030 | INFO     | process IDs to be killed: [20459] (in reverse order)
[2026-02-28 12:13:54] 2026-02-28 17:13:24,074 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 12:13:54] 2026-02-28 17:13:24,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 12:13:54] 2026-02-28 17:13:24,083 | INFO     | did not find any defunct processes belonging to 20459
[2026-02-28 12:13:54] 2026-02-28 17:13:24,093 | INFO     | did not find any defunct processes belonging to 20459
[2026-02-28 12:13:54] 2026-02-28 17:13:24,093 | INFO     | ready for new job
[2026-02-28 12:13:54] 2026-02-28 17:13:24,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 12:13:54] 2026-02-28 17:13:24,094 | INFO     | **************************************
[2026-02-28 12:13:54] 2026-02-28 17:13:24,094 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 12:13:54] 2026-02-28 17:13:24,095 | INFO     | **************************************
[2026-02-28 12:13:54] 2026-02-28 17:13:24,095 | INFO     | 
[2026-02-28 12:13:54] 2026-02-28 17:13:24,096 | INFO     | architecture information:
[2026-02-28 12:13:54] 2026-02-28 17:13:24,096 | INFO     | executing command: cat /etc/os-release
[2026-02-28 12:13:54] 2026-02-28 17:13:24,105 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 12:13:54] 2026-02-28 17:13:24,111 | INFO     | cat /etc/os-release:
[2026-02-28 12:13:54] NAME="CentOS Linux"
[2026-02-28 12:13:54] VERSION="7 (Core)"
[2026-02-28 12:13:54] ID="centos"
[2026-02-28 12:13:54] ID_LIKE="rhel fedora"
[2026-02-28 12:13:54] VERSION_ID="7"
[2026-02-28 12:13:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 12:13:54] ANSI_COLOR="0;31"
[2026-02-28 12:13:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 12:13:54] HOME_URL="https://www.centos.org/"
[2026-02-28 12:13:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 12:13:54] 
[2026-02-28 12:13:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 12:13:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 12:13:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 12:13:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 12:13:54] 
[2026-02-28 12:13:54] 2026-02-28 17:13:24,111 | INFO     | **************************************
[2026-02-28 12:13:54] 2026-02-28 17:13:24,195 | INFO     | number of running child processes to parent process 20459: 1
[2026-02-28 12:13:54] 2026-02-28 17:13:24,195 | INFO     | maximum number of monitored processes: 6
[2026-02-28 12:13:54] 2026-02-28 17:13:24,195 | INFO     | aborting job monitoring since job object (job id=7032912758) has expired
[2026-02-28 12:13:54] 2026-02-28 17:13:24,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-28 12:13:54] 2026-02-28 17:13:24,630 | INFO     | sufficient remaining disk space (29448208384 B)
[2026-02-28 12:13:54] 2026-02-28 17:13:24,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 12:13:54] 2026-02-28 17:13:24,631 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 12:13:54] 2026-02-28 17:13:24,631 | INFO     | update_server=False
[2026-02-28 12:13:54] 2026-02-28 17:13:24,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 12:13:54] 2026-02-28 17:13:24,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 12:13:54] 2026-02-28 17:13:24,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 12:13:54] 2026-02-28 17:13:24,632 | INFO     | will abort loop
[2026-02-28 12:13:54] 2026-02-28 17:13:24,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 12:13:54] 2026-02-28 17:13:24,714 | INFO     | all job control threads have been joined
[2026-02-28 12:13:54] 2026-02-28 17:13:24,969 | INFO     | all data control threads have been joined
[2026-02-28 12:13:54] 2026-02-28 17:13:25,637 | INFO     | [job] retrieve thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,637 | INFO     | [job] queue monitor thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,638 | INFO     | [job] job monitor thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 12:13:54] 2026-02-28 17:13:25,646 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,689 | INFO     | [payload] validate_post thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,697 | INFO     | [data] copytool_in thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,718 | INFO     | [job] control thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,933 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:25,958 | INFO     | all payload control threads have been joined
[2026-02-28 12:13:54] 2026-02-28 17:13:25,974 | INFO     | [data] control thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:26,243 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:26,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:26,732 | INFO     | [payload] failed_post thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:26,963 | INFO     | [payload] control thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:27,114 | INFO     | [job] validate thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:27,648 | INFO     | [data] copytool_out thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:28,638 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 12:13:54] 2026-02-28 17:13:37,037 | INFO     | [monitor] cgroup control has ended
[2026-02-28 12:13:54] 2026-02-28 17:13:38,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548310173504)>', '<ExcThread(monitor, started 140547352155904)>']
[2026-02-28 12:13:54] 2026-02-28 17:13:43,028 | INFO     | all workflow threads have been joined
[2026-02-28 12:13:54] 2026-02-28 17:13:43,028 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 12:13:54] 2026-02-28 17:13:43,028 | INFO     | traces error code: 0
[2026-02-28 12:13:54] 2026-02-28 17:13:43,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 12:13:54] 2026-02-28 17:13:54,064 | INFO     | PID=16071 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-28 12:13:54] 2026-02-28 17:13:54,065 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 12:13:54] 2026-02-28 17:13:54,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 12:13:54] 2026-02-28 17:13:54,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 12:13:54] 2026-02-28 17:13:54,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 12:13:54] 2026-02-28 17:13:54,065 | INFO     | [monitor] control thread has ended
[2026-02-28 12:13:54] 2026-02-28 17:13:54,179 [wrapper] ==== pilot stdout END ====
[2026-02-28 12:13:54] 2026-02-28 17:13:54,182 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 12:13:54] 2026-02-28 17:13:54,185 [wrapper] pilotpid: 16071
[2026-02-28 12:13:54] 2026-02-28 17:13:54,188 [wrapper] Pilot exit status: 0
[2026-02-28 12:13:54] 2026-02-28 17:13:54,200 [wrapper] pandaids: 7032912758
[2026-02-28 12:13:54] 2026-02-28 17:13:54,245 [wrapper] cleanup supervisor_pilot 15115 16072
[2026-02-28 12:13:54] 2026-02-28 17:13:54,248 [wrapper] Test setup, not cleaning
[2026-02-28 12:13:54] 2026-02-28 17:13:54,251 [wrapper] apfmon messages muted
[2026-02-28 12:13:54] 2026-02-28 17:13:54,255 [wrapper] ==== wrapper stdout END ====
[2026-02-28 12:13:54] 2026-02-28 17:13:54,258 [wrapper] ==== wrapper stderr END ====
[2026-02-28 12:13:54]  *** Error codes and diagnostics ***
[2026-02-28 12:13:54]     "exeErrorCode": 0,
[2026-02-28 12:13:54]     "exeErrorDiag": "",
[2026-02-28 12:13:54]     "pilotErrorCode": 0,
[2026-02-28 12:13:54]     "pilotErrorDiag": "",
[2026-02-28 12:13:54]  *** Listing of results directory ***
[2026-02-28 12:13:54] total 331036
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas    584627 Feb 28 03:11 pilot3.tar.gz
[2026-02-28 12:13:54] -rwx------ 1 boincer umatlas     36322 Feb 28 03:14 runpilot2-wrapper.sh
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas      5111 Feb 28 03:16 queuedata.json
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas       100 Feb 28 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 12:13:54] -rwxr-xr-x 1 boincer umatlas      7986 Feb 28 11:05 run_atlas
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas       105 Feb 28 11:05 job.xml
[2026-02-28 12:13:54] -rw-r--r-- 2 boincer umatlas 190802843 Feb 28 11:05 EVNT.48447869._000001.pool.root.1
[2026-02-28 12:13:54] -rw-r--r-- 2 boincer umatlas     15845 Feb 28 11:05 start_atlas.sh
[2026-02-28 12:13:54] drwxrwx--x 2 boincer umatlas      4096 Feb 28 11:05 shared
[2026-02-28 12:13:54] -rw-r--r-- 2 boincer umatlas    597963 Feb 28 11:05 input.tar.gz
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas         0 Feb 28 11:05 boinc_lockfile
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas      2606 Feb 28 11:05 pandaJob.out
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas        57 Feb 28 11:05 setup.sh.local
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas    998790 Feb 28 11:05 agis_schedconf.cvmfs.json
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas   1513015 Feb 28 11:05 agis_ddmendpoints.agis.ALL.json
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas       434 Feb 28 11:05 workernode_map.json
[2026-02-28 12:13:54] drwx------ 5 boincer umatlas      4096 Feb 28 11:05 pilot3
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas 142288199 Feb 28 12:12 HITS.48843629._000017.pool.root.1
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas      5952 Feb 28 12:12 init_data.xml
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas       529 Feb 28 12:12 boinc_task_state.xml
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas      1050 Feb 28 12:13 memory_monitor_summary.json
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas    383545 Feb 28 12:13 log.48843629._000017.job.log.tgz.1
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas      6397 Feb 28 12:13 heartbeat.json
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas        27 Feb 28 12:13 wrapper_checkpoint.txt
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas      8192 Feb 28 12:13 boinc_mmap_file
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas       745 Feb 28 12:13 pilotlog.txt
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas        95 Feb 28 12:13 pilot_heartbeat.json
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas    597876 Feb 28 12:13 log.48843629._000017.job.log.1
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas       357 Feb 28 12:13 output.list
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas       620 Feb 28 12:13 runtime_log
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas   1003520 Feb 28 12:13 result.tar.gz
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas      9343 Feb 28 12:13 runtime_log.err
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas       658 Feb 28 12:13 khgMDmVeUG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmum6KDmV1ALNm.diag
[2026-02-28 12:13:54] -rw-r--r-- 1 boincer umatlas     21297 Feb 28 12:13 stderr.txt
[2026-02-28 12:13:54] HITS file was successfully produced:
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas 142288199 Feb 28 12:12 shared/HITS.pool.root.1
[2026-02-28 12:13:54]  *** Contents of shared directory: ***
[2026-02-28 12:13:54] total 326872
[2026-02-28 12:13:54] -rw-r--r-- 2 boincer umatlas 190802843 Feb 28 11:05 ATLAS.root_0
[2026-02-28 12:13:54] -rw-r--r-- 2 boincer umatlas     15845 Feb 28 11:05 start_atlas.sh
[2026-02-28 12:13:54] -rw-r--r-- 2 boincer umatlas    597963 Feb 28 11:05 input.tar.gz
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas 142288199 Feb 28 12:12 HITS.pool.root.1
[2026-02-28 12:13:54] -rw------- 1 boincer umatlas   1003520 Feb 28 12:13 result.tar.gz
12:13:55 (12219): run_atlas exited; CPU time 38905.135130
12:13:55 (12219): called boinc_finish(0)

</stderr_txt>
]]>

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