Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:59 (1661578): wrapper (7.7.26015): starting
09:35:59 (1661578): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 09:35:59] Arguments: --nthreads 8
[2026-02-28 09:35:59] Threads: 8
[2026-02-28 09:35:59] Checking for CVMFS
[2026-02-28 09:35:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 09:35:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 09:35:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 09:36:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 09:36:00] 2.13.3.0 7268 95011 291164 156735 0 298 40341896 40960000 45060 16776704 0 544346858 99.677 468033368 34676 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-28 09:36:00] CVMFS is ok
[2026-02-28 09:36:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 09:36:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 09:36:00] Further information can be found at the LHC@home message board.
[2026-02-28 09:36:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 09:36:00] Checking for apptainer binary...
[2026-02-28 09:36:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 09:36:00] Running /usr/bin/apptainer --version
[2026-02-28 09:36:00] apptainer version 1.4.5-2.el9
[2026-02-28 09:36:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 09:36:00] c-212-18.aglt2.org
[2026-02-28 09:36:00] apptainer works
[2026-02-28 09:36:00] Set ATHENA_PROC_NUMBER=8
[2026-02-28 09:36:00] Set ATHENA_CORE_NUMBER=8
[2026-02-28 09:36:00] Starting ATLAS job with PandaID=7032912746
[2026-02-28 09:36:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:40:05 (1661578): BOINC client no longer exists - exiting
10:40:05 (1661578): timer handler: client dead, exiting
10:49:59 (2428352): wrapper (7.7.26015): starting
10:49:59 (2428352): wrapper: running run_atlas (--nthreads 9)
[2026-02-28 10:49:59] Arguments: --nthreads 9
[2026-02-28 10:49:59] Threads: 9
[2026-02-28 10:49:59] This job has been restarted, cleaning up previous attempt
[2026-02-28 10:49:59] Checking for CVMFS
[2026-02-28 10:49:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 10:49:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 10:49:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 10:50:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 10:50:00] 2.13.3.0 7268 95085 293488 156737 2 294 20813619 40960001 43290 16776704 0 545002515 99.677 468243006 34675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-28 10:50:00] CVMFS is ok
[2026-02-28 10:50:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 10:50:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 10:50:00] Further information can be found at the LHC@home message board.
[2026-02-28 10:50:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 10:50:00] Checking for apptainer binary...
[2026-02-28 10:50:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 10:50:00] Running /usr/bin/apptainer --version
[2026-02-28 10:50:00] apptainer version 1.4.5-2.el9
[2026-02-28 10:50:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 10:50:00] c-212-18.aglt2.org
[2026-02-28 10:50:00] apptainer works
[2026-02-28 10:50:00] Set ATHENA_PROC_NUMBER=9
[2026-02-28 10:50:00] Set ATHENA_CORE_NUMBER=9
[2026-02-28 10:50:00] Starting ATLAS job with PandaID=7032912746
[2026-02-28 10:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 13:21:59]  *** The last 200 lines of the pilot log: ***
[2026-02-28 13:21:59] 2026-02-28 18:21:22,176 | INFO     | job 7032912746 has finished - writing final server update
[2026-02-28 13:21:59] 2026-02-28 18:21:22,176 | INFO     | total number of processed events: 400 (read)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,194 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7032912746/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,194 | INFO     | extracted standard info from prmon json
[2026-02-28 13:21:59] 2026-02-28 18:21:22,194 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 13:21:59] 2026-02-28 18:21:22,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 13:21:59] 2026-02-28 18:21:22,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 13:21:59] 2026-02-28 18:21:22,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 13:21:59] 2026-02-28 18:21:22,201 | INFO     | fitting pss+swap vs Time
[2026-02-28 13:21:59] 2026-02-28 18:21:22,201 | INFO     | sum of square deviations: 1005264473.2432436
[2026-02-28 13:21:59] 2026-02-28 18:21:22,202 | INFO     | sum of deviations: 26438257083.97299
[2026-02-28 13:21:59] 2026-02-28 18:21:22,202 | INFO     | mean x: 1772298335.7567568
[2026-02-28 13:21:59] 2026-02-28 18:21:22,202 | INFO     | mean y: 2488664.277027027
[2026-02-28 13:21:59] 2026-02-28 18:21:22,202 | INFO     | intersect: -46608607497.37631
[2026-02-28 13:21:59] 2026-02-28 18:21:22,202 | INFO     | chi2: 1.788885294167747
[2026-02-28 13:21:59] 2026-02-28 18:21:22,203 | INFO     | sum of square deviations: 906799797.9020964
[2026-02-28 13:21:59] 2026-02-28 18:21:22,203 | INFO     | sum of deviations: 25486749697.405586
[2026-02-28 13:21:59] 2026-02-28 18:21:22,203 | INFO     | mean x: 1772298183.2657342
[2026-02-28 13:21:59] 2026-02-28 18:21:22,203 | INFO     | mean y: 2487191.041958042
[2026-02-28 13:21:59] 2026-02-28 18:21:22,203 | INFO     | intersect: -49810184018.8134
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | chi2: 1.7908608763949438
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | current chi2=1.7908608763949438 (change=-0.11043649548898818 %)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | right removable region: 142
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | sum of square deviations: 906776617.9020964
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | sum of deviations: -929830703.5734271
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | mean x: 1772298488.2657342
[2026-02-28 13:21:59] 2026-02-28 18:21:22,204 | INFO     | mean y: 2530531.6993006994
[2026-02-28 13:21:59] 2026-02-28 18:21:22,205 | INFO     | intersect: 1819888321.6463885
[2026-02-28 13:21:59] 2026-02-28 18:21:22,207 | INFO     | chi2: 0.022182586659649527
[2026-02-28 13:21:59] 2026-02-28 18:21:22,207 | INFO     | current chi2=0.022182586659649527 (change=98.75997713593092 %)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,207 | INFO     | sum of square deviations: 814940050.0362331
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | sum of deviations: -2120523451.5724635
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | mean x: 1772298640.7753623
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | mean y: 2532439.9492753623
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | intersect: 4614161026.355187
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | chi2: 0.0065139302079970565
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | current chi2=0.0065139302079970565 (change=70.63493853110468 %)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,208 | INFO     | sum of square deviations: 729522207.1428593
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | sum of deviations: -1286161807.2857144
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | mean x: 1772298793.2857144
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | mean y: 2530945.060150376
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | intersect: 3127128108.3871703
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | chi2: 0.005729045302657164
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | current chi2=0.005729045302657164 (change=12.049329364571644 %)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | left removable region: 30
[2026-02-28 13:21:59] 2026-02-28 18:21:22,209 | INFO     | sum of square deviations: 435655070.42857164
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | sum of deviations: 905496310.0
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | mean x: 1772299067.8214285
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | mean y: 2526100.0
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | intersect: -3681145628.0715365
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | chi2: 0.0002002817497535472
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | current memory leak: 2.08 B/s (using 112 data points, chi2=0.00)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,210 | INFO     | could have reported an average CPU frequency of 3430 MHz (9 samples)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | ..............................
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . Timing measurements:
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . get job = 0 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . initial setup = 1 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . payload setup = 12 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . stage-in = 0 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . payload execution = 9034 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . stage-out = 2 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | . log creation = 0 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,211 | INFO     | ..............................
[2026-02-28 13:21:59] 2026-02-28 18:21:22,345 | INFO     | 
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | job summary report
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | --------------------------------------------------
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | PanDA job id: 7032912746
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | task id: 48843629
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | errors: (none)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | pilot state: finished 
[2026-02-28 13:21:59] 2026-02-28 18:21:22,350 | INFO     | transexitcode: 0
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | exeerrorcode: 0
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | exeerrordiag: 
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | exitcode: 0
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | exitmsg: OK
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | cpuconsumptiontime: 27358 s
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | nevents: 400
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | neventsw: 0
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | pid: 2459711
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | pgrp: 2459711
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | corecount: 9
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | event service: False
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | sizes: {0: 2281894, 1: 2282355, 9050: 2310566, 9051: 2310565, 9053: 2319675, 9056: 2319877}
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | --------------------------------------------------
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | 
[2026-02-28 13:21:59] 2026-02-28 18:21:22,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-28 13:21:59] 2026-02-28 18:21:22,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | job 7032912746 has completed (purged errors)
[2026-02-28 13:21:59] 2026-02-28 18:21:22,538 | INFO     | overall cleanup function is called
[2026-02-28 13:21:59] 2026-02-28 18:21:23,561 | INFO     | --- collectZombieJob: --- 10, [2459711]
[2026-02-28 13:21:59] 2026-02-28 18:21:23,561 | INFO     | zombie collector waiting for pid 2459711
[2026-02-28 13:21:59] 2026-02-28 18:21:23,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 13:21:59] 2026-02-28 18:21:23,561 | INFO     | collected zombie processes
[2026-02-28 13:21:59] 2026-02-28 18:21:23,561 | INFO     | will attempt to kill all subprocesses of pid=2459711
[2026-02-28 13:21:59] 2026-02-28 18:21:24,876 | INFO     | PID=2452555 has CPU usage=18.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-28 13:21:59] 2026-02-28 18:21:24,877 | INFO     | .. there are 63 such processes running
[2026-02-28 13:21:59] 2026-02-28 18:21:25,740 | INFO     | process IDs to be killed: [2459711] (in reverse order)
[2026-02-28 13:21:59] 2026-02-28 18:21:25,964 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 13:21:59] 2026-02-28 18:21:25,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 13:21:59] 2026-02-28 18:21:25,996 | INFO     | did not find any defunct processes belonging to 2459711
[2026-02-28 13:21:59] 2026-02-28 18:21:26,030 | INFO     | did not find any defunct processes belonging to 2459711
[2026-02-28 13:21:59] 2026-02-28 18:21:26,030 | INFO     | ready for new job
[2026-02-28 13:21:59] 2026-02-28 18:21:26,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 13:21:59] 2026-02-28 18:21:26,033 | INFO     | **************************************
[2026-02-28 13:21:59] 2026-02-28 18:21:26,034 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 13:21:59] 2026-02-28 18:21:26,034 | INFO     | **************************************
[2026-02-28 13:21:59] 2026-02-28 18:21:26,034 | INFO     | 
[2026-02-28 13:21:59] 2026-02-28 18:21:26,046 | INFO     | architecture information:
[2026-02-28 13:21:59] 2026-02-28 18:21:26,059 | INFO     | executing command: cat /etc/os-release
[2026-02-28 13:21:59] 2026-02-28 18:21:26,074 | INFO     | cat /etc/os-release:
[2026-02-28 13:21:59] NAME="CentOS Linux"
[2026-02-28 13:21:59] VERSION="7 (Core)"
[2026-02-28 13:21:59] ID="centos"
[2026-02-28 13:21:59] ID_LIKE="rhel fedora"
[2026-02-28 13:21:59] VERSION_ID="7"
[2026-02-28 13:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 13:21:59] ANSI_COLOR="0;31"
[2026-02-28 13:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 13:21:59] HOME_URL="https://www.centos.org/"
[2026-02-28 13:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 13:21:59] 
[2026-02-28 13:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 13:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 13:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 13:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 13:21:59] 
[2026-02-28 13:21:59] 2026-02-28 18:21:26,074 | INFO     | **************************************
[2026-02-28 13:21:59] 2026-02-28 18:21:26,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-28 13:21:59] 2026-02-28 18:21:26,618 | INFO     | sufficient remaining disk space (127373672448 B)
[2026-02-28 13:21:59] 2026-02-28 18:21:26,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 13:21:59] 2026-02-28 18:21:26,619 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 13:21:59] 2026-02-28 18:21:26,619 | INFO     | update_server=False
[2026-02-28 13:21:59] 2026-02-28 18:21:26,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 13:21:59] 2026-02-28 18:21:26,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:21:59] 2026-02-28 18:21:26,755 | INFO     | aborting loop
[2026-02-28 13:21:59] 2026-02-28 18:21:26,821 | INFO     | all data control threads have been joined
[2026-02-28 13:21:59] 2026-02-28 18:21:27,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:21:59] 2026-02-28 18:21:27,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 13:21:59] 2026-02-28 18:21:27,572 | INFO     | all payload control threads have been joined
[2026-02-28 13:21:59] 2026-02-28 18:21:27,626 | INFO     | [job] retrieve thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:27,761 | INFO     | [job] job monitor thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:27,829 | INFO     | [data] control thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:27,889 | INFO     | [data] copytool_in thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,024 | INFO     | [payload] validate_post thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,066 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,124 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,275 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,286 | INFO     | all job control threads have been joined
[2026-02-28 13:21:59] 2026-02-28 18:21:28,400 | INFO     | [job] queue monitor thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,578 | INFO     | [payload] control thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,602 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,609 | INFO     | [payload] failed_post thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:28,988 | INFO     | [job] validate thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:29,292 | INFO     | [job] control thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:29,565 | INFO     | [data] copytool_out thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:30,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 13:21:59] 2026-02-28 18:21:34,145 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 13:21:59] 2026-02-28 18:21:40,426 | INFO     | [monitor] cgroup control has ended
[2026-02-28 13:21:59] 2026-02-28 18:21:41,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431629641536)>', '<ExcThread(monitor, started 140431270606592)>']
[2026-02-28 13:21:59] 2026-02-28 18:21:46,172 | INFO     | all workflow threads have been joined
[2026-02-28 13:21:59] 2026-02-28 18:21:46,172 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 13:21:59] 2026-02-28 18:21:46,172 | INFO     | traces error code: 0
[2026-02-28 13:21:59] 2026-02-28 18:21:46,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 13:21:59] 2026-02-28 18:21:57,797 | INFO     | PID=2452555 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 13:21:59] 2026-02-28 18:21:57,800 | INFO     | .. there are 63 such processes running
[2026-02-28 13:21:59] 2026-02-28 18:21:57,801 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 13:21:59] 2026-02-28 18:21:57,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 13:21:59] 2026-02-28 18:21:57,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 13:21:59] 2026-02-28 18:21:57,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 13:21:59] 2026-02-28 18:21:57,801 | INFO     | [monitor] control thread has ended
[2026-02-28 13:21:59] 2026-02-28 18:21:57,971 [wrapper] ==== pilot stdout END ====
[2026-02-28 13:21:59] 2026-02-28 18:21:57,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 13:21:59] 2026-02-28 18:21:57,982 [wrapper] pilotpid: 2452555
[2026-02-28 13:21:59] 2026-02-28 18:21:58,001 [wrapper] Pilot exit status: 0
[2026-02-28 13:21:59] 2026-02-28 18:21:58,132 [wrapper] pandaids: 7032912746 7032912746
[2026-02-28 13:21:59] 2026-02-28 18:21:58,323 [wrapper] cleanup supervisor_pilot 3671937 2452557
[2026-02-28 13:21:59] 2026-02-28 18:21:58,334 [wrapper] Test setup, not cleaning
[2026-02-28 13:21:59] 2026-02-28 18:21:58,351 [wrapper] apfmon messages muted
[2026-02-28 13:21:59] 2026-02-28 18:21:58,356 [wrapper] ==== wrapper stdout END ====
[2026-02-28 13:21:59] 2026-02-28 18:21:58,359 [wrapper] ==== wrapper stderr END ====
[2026-02-28 13:21:59]  *** Error codes and diagnostics ***
[2026-02-28 13:21:59]     "exeErrorCode": 0,
[2026-02-28 13:21:59]     "exeErrorDiag": "",
[2026-02-28 13:21:59]     "pilotErrorCode": 0,
[2026-02-28 13:21:59]     "pilotErrorDiag": "",
[2026-02-28 13:21:59]  *** Listing of results directory ***
[2026-02-28 13:21:59] total 517628
[2026-02-28 13:21:59] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 03:11 pilot3.tar.gz
[2026-02-28 13:21:59] -rwx------. 1 boincer umatlas     36322 Feb 28 03:14 runpilot2-wrapper.sh
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 03:16 queuedata.json
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas       100 Feb 28 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 13:21:59] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 28 09:35 run_atlas
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas       105 Feb 28 09:35 job.xml
[2026-02-28 13:21:59] -rw-r--r--. 3 boincer umatlas 190802843 Feb 28 09:35 EVNT.48447869._000001.pool.root.1
[2026-02-28 13:21:59] -rw-r--r--. 3 boincer umatlas 190802843 Feb 28 09:35 ATLAS.root_0
[2026-02-28 13:21:59] -rw-r--r--. 2 boincer umatlas     15845 Feb 28 09:35 start_atlas.sh
[2026-02-28 13:21:59] drwxrwx--x. 2 boincer umatlas      4096 Feb 28 09:35 shared
[2026-02-28 13:21:59] -rw-r--r--. 2 boincer umatlas    597961 Feb 28 09:35 input.tar.gz
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas         0 Feb 28 09:35 boinc_lockfile
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas      2604 Feb 28 10:50 pandaJob.out
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas        57 Feb 28 10:50 setup.sh.local
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas    998790 Feb 28 10:50 agis_schedconf.cvmfs.json
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas       429 Feb 28 10:50 workernode_map.json
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas      6959 Feb 28 13:13 init_data.xml
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas 141381710 Feb 28 13:20 HITS.48843629._000005.pool.root.1
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas       530 Feb 28 13:20 boinc_task_state.xml
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas      1041 Feb 28 13:21 memory_monitor_summary.json
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas   1513015 Feb 28 13:21 agis_ddmendpoints.agis.ALL.json
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas    388958 Feb 28 13:21 log.48843629._000005.job.log.tgz.1
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas      6332 Feb 28 13:21 heartbeat.json
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas      8192 Feb 28 13:21 boinc_mmap_file
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas        28 Feb 28 13:21 wrapper_checkpoint.txt
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas        96 Feb 28 13:21 pilot_heartbeat.json
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas       823 Feb 28 13:21 pilotlog.txt
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas   1182587 Feb 28 13:21 log.48843629._000005.job.log.1
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas       357 Feb 28 13:21 output.list
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas       620 Feb 28 13:21 runtime_log
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas   1587200 Feb 28 13:21 result.tar.gz
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas      9426 Feb 28 13:21 runtime_log.err
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas       782 Feb 28 13:21 24SLDmVeUG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnm6KDmy3xrnn.diag
[2026-02-28 13:21:59] -rw-r--r--. 1 boincer umatlas     18440 Feb 28 13:21 stderr.txt
[2026-02-28 13:21:59] HITS file was successfully produced:
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas 141381710 Feb 28 13:20 shared/HITS.pool.root.1
[2026-02-28 13:21:59]  *** Contents of shared directory: ***
[2026-02-28 13:21:59] total 326560
[2026-02-28 13:21:59] -rw-r--r--. 3 boincer umatlas 190802843 Feb 28 09:35 ATLAS.root_0
[2026-02-28 13:21:59] -rw-r--r--. 2 boincer umatlas     15845 Feb 28 09:35 start_atlas.sh
[2026-02-28 13:21:59] -rw-r--r--. 2 boincer umatlas    597961 Feb 28 09:35 input.tar.gz
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas 141381710 Feb 28 13:20 HITS.pool.root.1
[2026-02-28 13:21:59] -rw-------. 1 boincer umatlas   1587200 Feb 28 13:21 result.tar.gz
13:22:00 (2428352): run_atlas exited; CPU time 27836.380154
13:22:00 (2428352): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN