Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:28 (32624): wrapper (7.7.26015): starting
09:04:28 (32624): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 09:04:28] Arguments: --nthreads 8
[2026-03-01 09:04:28] Threads: 8
[2026-03-01 09:04:28] Checking for CVMFS
[2026-03-01 09:04:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 09:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 09:04:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 09:04:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 09:04:32] 2.11.2.0 15174 108573 130764 156762 0 56 16644484 25165825 899 130560 153 34952876 99.831 23850637 905 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-01 09:04:32] CVMFS is ok
[2026-03-01 09:04:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 09:04:32] Checking for apptainer binary...
[2026-03-01 09:04:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 09:04:32] Running /usr/bin/apptainer --version
[2026-03-01 09:04:32] apptainer version 1.3.2-1.el7
[2026-03-01 09:04:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 09:05:00] cg-vwn376.simple-grid.lan
[2026-03-01 09:05:00] apptainer works
[2026-03-01 09:05:00] Set ATHENA_PROC_NUMBER=8
[2026-03-01 09:05:00] Set ATHENA_CORE_NUMBER=8
[2026-03-01 09:05:00] Starting ATLAS job with PandaID=7032958780
[2026-03-01 09:05:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 22:08:48]  *** The last 200 lines of the pilot log: ***
[2026-03-01 22:08:48] 2026-03-01 21:08:09,927 | INFO     | extracted standard info from prmon json
[2026-03-01 22:08:48] 2026-03-01 21:08:09,927 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 22:08:48] 2026-03-01 21:08:09,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 22:08:48] 2026-03-01 21:08:09,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 22:08:48] 2026-03-01 21:08:09,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 22:08:48] 2026-03-01 21:08:09,946 | INFO     | fitting pss+swap vs Time
[2026-03-01 22:08:48] 2026-03-01 21:08:09,948 | INFO     | sum of square deviations: 136118905670.0
[2026-03-01 22:08:48] 2026-03-01 21:08:09,977 | INFO     | time since job start (46616s) is within the limit (349056.0s)
[2026-03-01 22:08:48] 2026-03-01 21:08:09,978 | INFO     | sum of deviations: 294659485783.50006
[2026-03-01 22:08:48] 2026-03-01 21:08:09,978 | INFO     | mean x: 1772376091.5
[2026-03-01 22:08:48] 2026-03-01 21:08:09,979 | INFO     | mean y: 2534788.067105263
[2026-03-01 22:08:48] 2026-03-01 21:08:09,979 | INFO     | intersect: -3834165376.144255
[2026-03-01 22:08:48] 2026-03-01 21:08:09,980 | INFO     | chi2: 9.328489831171844
[2026-03-01 22:08:48] 2026-03-01 21:08:09,981 | INFO     | sum of square deviations: 133449981210.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,005 | INFO     | sum of deviations: 401809748050.00006
[2026-03-01 22:08:48] 2026-03-01 21:08:10,005 | INFO     | mean x: 1772375939.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,005 | INFO     | mean y: 2540885.7841059603
[2026-03-01 22:08:48] 2026-03-01 21:08:10,006 | INFO     | intersect: -5333974886.209927
[2026-03-01 22:08:48] 2026-03-01 21:08:10,007 | INFO     | chi2: 7.659482630259954
[2026-03-01 22:08:48] 2026-03-01 21:08:10,007 | INFO     | current chi2=7.659482630259954 (change=17.89150474640362 %)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,007 | INFO     | right removable region: 754
[2026-03-01 22:08:48] 2026-03-01 21:08:10,008 | INFO     | sum of square deviations: 133449981210.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,025 | INFO     | sum of deviations: 18251548248.999947
[2026-03-01 22:08:48] 2026-03-01 21:08:10,026 | INFO     | mean x: 1772376244.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,026 | INFO     | mean y: 2550578.332450331
[2026-03-01 22:08:48] 2026-03-01 21:08:10,026 | INFO     | intersect: -239851932.62663907
[2026-03-01 22:08:48] 2026-03-01 21:08:10,027 | INFO     | chi2: 4.676187227537236
[2026-03-01 22:08:48] 2026-03-01 21:08:10,027 | INFO     | current chi2=4.676187227537236 (change=49.87198022222839 %)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,028 | INFO     | sum of square deviations: 130816173687.5
[2026-03-01 22:08:48] 2026-03-01 21:08:10,047 | INFO     | sum of deviations: -186053804996.99997
[2026-03-01 22:08:48] 2026-03-01 21:08:10,047 | INFO     | mean x: 1772376396.5
[2026-03-01 22:08:48] 2026-03-01 21:08:10,047 | INFO     | mean y: 2562401.9706666665
[2026-03-01 22:08:48] 2026-03-01 21:08:10,047 | INFO     | intersect: 2523331532.884378
[2026-03-01 22:08:48] 2026-03-01 21:08:10,048 | INFO     | chi2: 2.1679764052092607
[2026-03-01 22:08:48] 2026-03-01 21:08:10,049 | INFO     | current chi2=2.1679764052092607 (change=53.637946905922995 %)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,050 | INFO     | sum of square deviations: 128217250540.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,069 | INFO     | sum of deviations: -221926019182.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,069 | INFO     | mean x: 1772376549.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,069 | INFO     | mean y: 2564502.722147651
[2026-03-01 22:08:48] 2026-03-01 21:08:10,070 | INFO     | intersect: 3070298917.198549
[2026-03-01 22:08:48] 2026-03-01 21:08:10,071 | INFO     | chi2: 2.0592900559692437
[2026-03-01 22:08:48] 2026-03-01 21:08:10,071 | INFO     | current chi2=2.0592900559692437 (change=5.01326255114507 %)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,071 | INFO     | left removable region: 30
[2026-03-01 22:08:48] 2026-03-01 21:08:10,072 | INFO     | sum of square deviations: 117677462225.0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,088 | INFO     | sum of deviations: -92025123257.99998
[2026-03-01 22:08:48] 2026-03-01 21:08:10,088 | INFO     | mean x: 1772376823.5
[2026-03-01 22:08:48] 2026-03-01 21:08:10,088 | INFO     | mean y: 2569589.400552486
[2026-03-01 22:08:48] 2026-03-01 21:08:10,088 | INFO     | intersect: 1388588564.9827733
[2026-03-01 22:08:48] 2026-03-01 21:08:10,089 | INFO     | chi2: 0.27002171946749565
[2026-03-01 22:08:48] 2026-03-01 21:08:10,090 | INFO     | current memory leak: -0.78 B/s (using 724 data points, chi2=0.27)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,091 | INFO     | could have reported an average CPU frequency of 1999 MHz (29 samples)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,091 | INFO     | ..............................
[2026-03-01 22:08:48] 2026-03-01 21:08:10,091 | INFO     | . Timing measurements:
[2026-03-01 22:08:48] 2026-03-01 21:08:10,091 | INFO     | . get job = 0 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,091 | INFO     | . initial setup = 122 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,091 | INFO     | . payload setup = 135 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,092 | INFO     | . stage-in = 0 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,092 | INFO     | . payload execution = 46465 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,092 | INFO     | . stage-out = 4 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,092 | INFO     | . log creation = 2 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,092 | INFO     | ..............................
[2026-03-01 22:08:48] 2026-03-01 21:08:10,224 | INFO     | 
[2026-03-01 22:08:48] 2026-03-01 21:08:10,224 | INFO     | job summary report
[2026-03-01 22:08:48] 2026-03-01 21:08:10,224 | INFO     | --------------------------------------------------
[2026-03-01 22:08:48] 2026-03-01 21:08:10,224 | INFO     | PanDA job id: 7032958780
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | task id: 48842551
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | errors: (none)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | pilot state: finished 
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | transexitcode: 0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | exeerrorcode: 0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | exeerrordiag: 
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | exitcode: 0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | exitmsg: OK
[2026-03-01 22:08:48] 2026-03-01 21:08:10,225 | INFO     | cpuconsumptiontime: 193743 s
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | nevents: 400
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | neventsw: 0
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | pid: 8641
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | pgrp: 8641
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | corecount: 8
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | event service: False
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | sizes: {0: 2281251, 1: 2281937, 2: 2282398, 46605: 2327799, 46606: 2327798, 46612: 2337038, 46615: 2337176}
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | --------------------------------------------------
[2026-03-01 22:08:48] 2026-03-01 21:08:10,226 | INFO     | 
[2026-03-01 22:08:48] 2026-03-01 21:08:10,227 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-03-01 22:08:48] 2026-03-01 21:08:10,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,885 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,885 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 22:08:48] 2026-03-01 21:08:10,885 | INFO     | job 7032958780 has completed (purged errors)
[2026-03-01 22:08:48] 2026-03-01 21:08:10,885 | INFO     | overall cleanup function is called
[2026-03-01 22:08:48] 2026-03-01 21:08:11,895 | INFO     | --- collectZombieJob: --- 10, [8641]
[2026-03-01 22:08:48] 2026-03-01 21:08:11,895 | INFO     | zombie collector waiting for pid 8641
[2026-03-01 22:08:48] 2026-03-01 21:08:11,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 22:08:48] 2026-03-01 21:08:11,895 | INFO     | collected zombie processes
[2026-03-01 22:08:48] 2026-03-01 21:08:11,896 | INFO     | will attempt to kill all subprocesses of pid=8641
[2026-03-01 22:08:48] 2026-03-01 21:08:11,995 | INFO     | process IDs to be killed: [8641] (in reverse order)
[2026-03-01 22:08:48] 2026-03-01 21:08:12,845 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 22:08:48] 2026-03-01 21:08:12,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 22:08:48] 2026-03-01 21:08:12,848 | INFO     | did not find any defunct processes belonging to 8641
[2026-03-01 22:08:48] 2026-03-01 21:08:12,850 | INFO     | did not find any defunct processes belonging to 8641
[2026-03-01 22:08:48] 2026-03-01 21:08:12,850 | INFO     | ready for new job
[2026-03-01 22:08:48] 2026-03-01 21:08:12,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 22:08:48] 2026-03-01 21:08:12,854 | INFO     | **************************************
[2026-03-01 22:08:48] 2026-03-01 21:08:12,855 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 22:08:48] 2026-03-01 21:08:12,855 | INFO     | **************************************
[2026-03-01 22:08:48] 2026-03-01 21:08:12,855 | INFO     | 
[2026-03-01 22:08:48] 2026-03-01 21:08:12,856 | INFO     | pilot is running in a VM
[2026-03-01 22:08:48] 2026-03-01 21:08:12,856 | INFO     | architecture information:
[2026-03-01 22:08:48] 2026-03-01 21:08:12,868 | INFO     | executing command: cat /etc/os-release
[2026-03-01 22:08:48] 2026-03-01 21:08:13,117 | INFO     | cat /etc/os-release:
[2026-03-01 22:08:48] NAME="CentOS Linux"
[2026-03-01 22:08:48] VERSION="7 (Core)"
[2026-03-01 22:08:48] ID="centos"
[2026-03-01 22:08:48] ID_LIKE="rhel fedora"
[2026-03-01 22:08:48] VERSION_ID="7"
[2026-03-01 22:08:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 22:08:48] ANSI_COLOR="0;31"
[2026-03-01 22:08:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 22:08:48] HOME_URL="https://www.centos.org/"
[2026-03-01 22:08:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 22:08:48] 
[2026-03-01 22:08:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 22:08:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 22:08:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 22:08:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 22:08:48] 
[2026-03-01 22:08:48] 2026-03-01 21:08:13,118 | INFO     | **************************************
[2026-03-01 22:08:48] 2026-03-01 21:08:13,621 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-03-01 22:08:48] 2026-03-01 21:08:13,911 | INFO     | sufficient remaining disk space (496908632064 B)
[2026-03-01 22:08:48] 2026-03-01 21:08:13,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 22:08:48] 2026-03-01 21:08:13,911 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 22:08:48] 2026-03-01 21:08:13,911 | INFO     | update_server=False
[2026-03-01 22:08:48] 2026-03-01 21:08:13,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 22:08:48] 2026-03-01 21:08:13,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 22:08:48] 2026-03-01 21:08:14,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 22:08:48] 2026-03-01 21:08:14,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 22:08:48] 2026-03-01 21:08:14,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 22:08:48] 2026-03-01 21:08:14,077 | INFO     | will abort loop
[2026-03-01 22:08:48] 2026-03-01 21:08:14,092 | INFO     | all payload control threads have been joined
[2026-03-01 22:08:48] 2026-03-01 21:08:14,474 | INFO     | all data control threads have been joined
[2026-03-01 22:08:48] 2026-03-01 21:08:14,872 | INFO     | all job control threads have been joined
[2026-03-01 22:08:48] 2026-03-01 21:08:14,917 | INFO     | [job] retrieve thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,083 | INFO     | [job] job monitor thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,098 | INFO     | [payload] control thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 22:08:48] 2026-03-01 21:08:15,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 22:08:48] 2026-03-01 21:08:15,287 | INFO     | [payload] failed_post thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,480 | INFO     | [data] control thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,523 | INFO     | [payload] validate_post thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,559 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,608 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,719 | INFO     | [data] copytool_in thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:15,878 | INFO     | [job] control thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:16,083 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:16,244 | INFO     | [job] validate thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:16,245 | INFO     | [job] queue monitor thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:17,288 | INFO     | [data] copytool_out thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:17,926 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 22:08:48] 2026-03-01 21:08:33,728 | INFO     | [monitor] cgroup control has ended
[2026-03-01 22:08:48] 2026-03-01 21:08:33,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140030120273728)>', '<ExcThread(monitor, started 140029556946688)>']
[2026-03-01 22:08:48] 2026-03-01 21:08:38,939 | INFO     | all workflow threads have been joined
[2026-03-01 22:08:48] 2026-03-01 21:08:38,939 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 22:08:48] 2026-03-01 21:08:38,940 | INFO     | traces error code: 0
[2026-03-01 22:08:48] 2026-03-01 21:08:38,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 22:08:48] 2026-03-01 21:08:43,176 | INFO     | PID=4183 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-01 22:08:48] 2026-03-01 21:08:43,177 | INFO     | .. there are 2 such processes running
[2026-03-01 22:08:48] 2026-03-01 21:08:43,183 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 22:08:48] 2026-03-01 21:08:43,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 22:08:48] 2026-03-01 21:08:43,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 22:08:48] 2026-03-01 21:08:43,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 22:08:48] 2026-03-01 21:08:43,184 | CRITICAL | thread 'MainThread' is not alive
[2026-03-01 22:08:48] 2026-03-01 21:08:43,184 | INFO     | [monitor] control thread has ended
[2026-03-01 22:08:48] 2026-03-01 21:08:43,623 [wrapper] ==== pilot stdout END ====
[2026-03-01 22:08:48] 2026-03-01 21:08:43,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 22:08:48] 2026-03-01 21:08:43,782 [wrapper] pilotpid: 4183
[2026-03-01 22:08:48] 2026-03-01 21:08:43,871 [wrapper] Pilot exit status: 0
[2026-03-01 22:08:48] 2026-03-01 21:08:44,260 [wrapper] pandaids: 7032958780
[2026-03-01 22:08:48] 2026-03-01 21:08:45,397 [wrapper] cleanup supervisor_pilot  4862 4184
[2026-03-01 22:08:48] 2026-03-01 21:08:45,497 [wrapper] Test setup, not cleaning
[2026-03-01 22:08:48] 2026-03-01 21:08:45,592 [wrapper] apfmon messages muted
[2026-03-01 22:08:48] 2026-03-01 21:08:45,676 [wrapper] ==== wrapper stdout END ====
[2026-03-01 22:08:48] 2026-03-01 21:08:45,757 [wrapper] ==== wrapper stderr END ====
[2026-03-01 22:08:48]  *** Error codes and diagnostics ***
[2026-03-01 22:08:48]     "exeErrorCode": 0,
[2026-03-01 22:08:48]     "exeErrorDiag": "",
[2026-03-01 22:08:48]     "pilotErrorCode": 0,
[2026-03-01 22:08:48]     "pilotErrorDiag": "",
[2026-03-01 22:08:48]  *** Listing of results directory ***
[2026-03-01 22:08:48] total 662504
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc    584627 Feb 28 11:26 pilot3.tar.gz
[2026-03-01 22:08:48] -rwx------. 1 boinc boinc     36322 Feb 28 11:29 runpilot2-wrapper.sh
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc      5111 Feb 28 11:31 queuedata.json
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc       100 Mar  1 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 22:08:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 09:04 run_atlas
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc       105 Mar  1 09:04 job.xml
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc      6392 Mar  1 09:04 init_data.xml
[2026-03-01 22:08:48] -rw-r--r--. 2 boinc boinc 305708011 Mar  1 09:04 EVNT.48448573._000002.pool.root.1
[2026-03-01 22:08:48] -rw-r--r--. 2 boinc boinc     15845 Mar  1 09:04 start_atlas.sh
[2026-03-01 22:08:48] drwxrwx--x. 2 boinc boinc        68 Mar  1 09:04 shared
[2026-03-01 22:08:48] -rw-r--r--. 2 boinc boinc    597972 Mar  1 09:04 input.tar.gz
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc         0 Mar  1 09:04 boinc_lockfile
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc      2616 Mar  1 09:05 pandaJob.out
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc       415 Mar  1 09:11 workernode_map.json
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc    998782 Mar  1 09:11 agis_schedconf.cvmfs.json
[2026-03-01 22:08:48] drwx------. 5 boinc boinc      4096 Mar  1 09:11 pilot3
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc 354082063 Mar  1 22:06 HITS.48842551._000028.pool.root.1
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc       532 Mar  1 22:06 boinc_task_state.xml
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc      1019 Mar  1 22:07 memory_monitor_summary.json
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc   1513015 Mar  1 22:08 agis_ddmendpoints.agis.ALL.json
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc    896287 Mar  1 22:08 log.48842551._000028.job.log.tgz.1
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc      6320 Mar  1 22:08 heartbeat.json
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc        29 Mar  1 22:08 wrapper_checkpoint.txt
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc      8192 Mar  1 22:08 boinc_mmap_file
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc        95 Mar  1 22:08 pilot_heartbeat.json
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc       889 Mar  1 22:08 pilotlog.txt
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc   6453816 Mar  1 22:08 log.48842551._000028.job.log.1
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc       357 Mar  1 22:08 output.list
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc       620 Mar  1 22:08 runtime_log
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc   7372800 Mar  1 22:08 result.tar.gz
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc      8832 Mar  1 22:08 runtime_log.err
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc       658 Mar  1 22:08 cBWKDmIlWG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7E5KDmIHm4So.diag
[2026-03-01 22:08:48] -rw-r--r--. 1 boinc boinc     20668 Mar  1 22:08 stderr.txt
[2026-03-01 22:08:48] HITS file was successfully produced:
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc 354082063 Mar  1 22:06 shared/HITS.pool.root.1
[2026-03-01 22:08:48]  *** Contents of shared directory: ***
[2026-03-01 22:08:48] total 652128
[2026-03-01 22:08:48] -rw-r--r--. 2 boinc boinc 305708011 Mar  1 09:04 ATLAS.root_0
[2026-03-01 22:08:48] -rw-r--r--. 2 boinc boinc     15845 Mar  1 09:04 start_atlas.sh
[2026-03-01 22:08:48] -rw-r--r--. 2 boinc boinc    597972 Mar  1 09:04 input.tar.gz
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc 354082063 Mar  1 22:06 HITS.pool.root.1
[2026-03-01 22:08:48] -rw-------. 1 boinc boinc   7372800 Mar  1 22:08 result.tar.gz
22:08:50 (32624): run_atlas exited; CPU time 194282.032784
22:08:50 (32624): called boinc_finish(0)

</stderr_txt>
]]>

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