Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:55:54 (3529336): wrapper (7.7.26015): starting
11:55:54 (3529336): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 11:55:54] Arguments: --nthreads 8
[2026-02-28 11:55:54] Threads: 8
[2026-02-28 11:55:54] Checking for CVMFS
[2026-02-28 11:55:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 11:55:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 11:55:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 11:55:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 11:55:55] 2.11.3.0 3498606 129116 239420 156743 0 406 44577161 45568001 11675 130560 0 729207623 99.797 444643345 18892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-28 11:55:55] CVMFS is ok
[2026-02-28 11:55:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 11:55:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 11:55:55] Further information can be found at the LHC@home message board.
[2026-02-28 11:55:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 11:55:55] Checking for apptainer binary...
[2026-02-28 11:55:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 11:55:55] Running /usr/bin/apptainer --version
[2026-02-28 11:55:55] apptainer version 1.4.1-1.el9
[2026-02-28 11:55:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 11:55:55] wns0011.triumf.lcg
[2026-02-28 11:55:55] apptainer works
[2026-02-28 11:55:55] Set ATHENA_PROC_NUMBER=8
[2026-02-28 11:55:55] Set ATHENA_CORE_NUMBER=8
[2026-02-28 11:55:55] Starting ATLAS job with PandaID=7033408314
[2026-02-28 11:55:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 12:06:22]  *** The last 200 lines of the pilot log: ***
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | WARNING  | wrong length of table data, x=[1772308857.0, 1772308918.0, 1772308979.0], y=[765.0, 53637.0, 464848.0] (must be same and length>=4)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | ..............................
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . Timing measurements:
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . get job = 0 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . initial setup = 44 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . payload setup = 78 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . stage-in = 1 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . payload execution = 195 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . stage-out = 2 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . log creation = 0 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | ..............................
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033408314/pilotlog.txt
[2026-02-28 12:06:22] 2026-02-28 20:05:13,764 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-28 12:06:22] - Log from pilotlog.txt -
[2026-02-28 12:06:22] 2026-02-28 20:05:13,460 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7033408314/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | INFO     | extracted standard info from prmon json
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | WARNING  | wrong length of table data, x=[1772308857.0, 1772308918.0, 1772308979.0], y=[765.0, 53637.0, 464848.0] (must be same and length>=4)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | ..............................
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . Timing measurements:
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . get job = 0 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . initial setup = 44 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . payload setup = 78 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . stage-in = 1 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . payload execution = 195 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . stage-out = 2 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . log creation = 0 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | ..............................
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033408314/pilotlog.txt
[2026-02-28 12:06:22] 2026-02-28 20:05:13,765 | WARNING  | 
[2026-02-28 12:06:22] [begin log extracts]
[2026-02-28 12:06:22] - Log from pilotlog.txt -
[2026-02-28 12:06:22] 2026-02-28 20:05:13,460 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7033408314/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | INFO     | extracted standard info from prmon json
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 12:06:22] 2026-02-28 20:05:13,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | WARNING  | wrong length of table data, x=[1772308857.0, 1772308918.0, 1772308979.0], y=[765.0, 53637.0, 464848.0] (must be same and length>=4)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | ..............................
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . Timing measurements:
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . get job = 0 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . initial setup = 44 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . payload setup = 78 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . stage-in = 1 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . payload execution = 195 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . stage-out = 2 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,462 | INFO     | . log creation = 0 s
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | ..............................
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-28 12:06:22] 2026-02-28 20:05:13,463 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7033408314/pilotlog.txt
[2026-02-28 12:06:22] [end log extracts]
[2026-02-28 12:06:22] 2026-02-28 20:05:13,765 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-28 12:06:22] 2026-02-28 20:05:13,766 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-28 12:06:22] 2026-02-28 20:05:13,881 | INFO     | time since job start (418s) is within the limit (349056.0s)
[2026-02-28 12:06:22] 2026-02-28 20:05:14,300 | INFO     | 
[2026-02-28 12:06:22] 2026-02-28 20:05:14,300 | INFO     | job summary report
[2026-02-28 12:06:22] 2026-02-28 20:05:14,300 | INFO     | --------------------------------------------------
[2026-02-28 12:06:22] 2026-02-28 20:05:14,300 | INFO     | PanDA job id: 7033408314
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | task id: 48700922
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-28 12:02:51,352 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | pilot state: failed 
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | transexitcode: 65
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | exeerrorcode: 65
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | exitcode: 65
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | cpuconsumptiontime: 16 s
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | nevents: 0
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | neventsw: 0
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | pid: 3537908
[2026-02-28 12:06:22] 2026-02-28 20:05:14,301 | INFO     | pgrp: 3537908
[2026-02-28 12:06:22] 2026-02-28 20:05:14,302 | INFO     | corecount: 8
[2026-02-28 12:06:22] 2026-02-28 20:05:14,302 | INFO     | event service: False
[2026-02-28 12:06:22] 2026-02-28 20:05:14,302 | INFO     | sizes: {0: 2281121, 1: 2281719, 2: 2281803, 3: 2281831, 4: 2281944, 6: 2282448, 7: 2282448, 18: 2282504, 279: 2305942, 282: 2310234, 285: 2310290, 401: 2310764}
[2026-02-28 12:06:22] 2026-02-28 20:05:14,302 | INFO     | --------------------------------------------------
[2026-02-28 12:06:22] 2026-02-28 20:05:14,302 | INFO     | 
[2026-02-28 12:06:22] 2026-02-28 20:05:14,302 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-28 12:06:22] 2026-02-28 20:05:14,823 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | job 7033408314 has completed (purged errors)
[2026-02-28 12:06:22] 2026-02-28 20:05:14,825 | INFO     | overall cleanup function is called
[2026-02-28 12:06:22] 2026-02-28 20:05:15,833 | INFO     | --- collectZombieJob: --- 10, [3537908]
[2026-02-28 12:06:22] 2026-02-28 20:05:15,834 | INFO     | zombie collector waiting for pid 3537908
[2026-02-28 12:06:22] 2026-02-28 20:05:15,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 12:06:22] 2026-02-28 20:05:15,834 | INFO     | collected zombie processes
[2026-02-28 12:06:22] 2026-02-28 20:05:15,834 | INFO     | will attempt to kill all subprocesses of pid=3537908
[2026-02-28 12:06:22] 2026-02-28 20:05:17,208 | INFO     | process IDs to be killed: [3537908] (in reverse order)
[2026-02-28 12:06:22] 2026-02-28 20:05:17,878 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 12:06:22] 2026-02-28 20:05:17,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 12:06:22] 2026-02-28 20:05:17,916 | INFO     | did not find any defunct processes belonging to 3537908
[2026-02-28 12:06:22] 2026-02-28 20:05:17,974 | INFO     | did not find any defunct processes belonging to 3537908
[2026-02-28 12:06:22] 2026-02-28 20:05:17,974 | INFO     | ready for new job
[2026-02-28 12:06:22] 2026-02-28 20:05:17,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 12:06:22] 2026-02-28 20:05:17,976 | INFO     | **************************************
[2026-02-28 12:06:22] 2026-02-28 20:05:17,976 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 12:06:22] 2026-02-28 20:05:17,976 | INFO     | **************************************
[2026-02-28 12:06:22] 2026-02-28 20:05:17,976 | INFO     | 
[2026-02-28 12:06:22] 2026-02-28 20:05:17,997 | INFO     | architecture information:
[2026-02-28 12:06:22] 2026-02-28 20:05:18,005 | INFO     | executing command: cat /etc/os-release
[2026-02-28 12:06:22] 2026-02-28 20:05:18,160 | INFO     | cat /etc/os-release:
[2026-02-28 12:06:22] NAME="CentOS Linux"
[2026-02-28 12:06:22] VERSION="7 (Core)"
[2026-02-28 12:06:22] ID="centos"
[2026-02-28 12:06:22] ID_LIKE="rhel fedora"
[2026-02-28 12:06:22] VERSION_ID="7"
[2026-02-28 12:06:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 12:06:22] ANSI_COLOR="0;31"
[2026-02-28 12:06:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 12:06:22] HOME_URL="https://www.centos.org/"
[2026-02-28 12:06:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 12:06:22] 
[2026-02-28 12:06:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 12:06:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 12:06:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 12:06:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 12:06:22] 
[2026-02-28 12:06:22] 2026-02-28 20:05:18,160 | INFO     | **************************************
[2026-02-28 12:06:22] 2026-02-28 20:05:18,663 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-28 12:06:22] 2026-02-28 20:05:18,797 | INFO     | sufficient remaining disk space (1449316581376 B)
[2026-02-28 12:06:22] 2026-02-28 20:05:18,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 12:06:22] 2026-02-28 20:05:18,797 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 12:06:22] 2026-02-28 20:05:18,797 | INFO     | update_server=False
[2026-02-28 12:06:22] 2026-02-28 20:05:18,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 12:06:22] 2026-02-28 20:05:18,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 12:06:22] 2026-02-28 20:05:19,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 12:06:22] 2026-02-28 20:05:19,427 | INFO     | all job control threads have been joined
[2026-02-28 12:06:22] 2026-02-28 20:05:19,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 12:06:22] 2026-02-28 20:05:19,449 | INFO     | aborting loop
[2026-02-28 12:06:22] 2026-02-28 20:05:19,645 | INFO     | all payload control threads have been joined
[2026-02-28 12:06:22] 2026-02-28 20:05:19,803 | INFO     | [job] retrieve thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:19,847 | INFO     | all data control threads have been joined
[2026-02-28 12:06:22] 2026-02-28 20:05:20,001 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,164 | INFO     | [job] validate thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,165 | INFO     | [data] copytool_in thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,329 | INFO     | [job] queue monitor thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,385 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,407 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,434 | INFO     | [job] control thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,455 | INFO     | [job] job monitor thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,653 | INFO     | [payload] control thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,806 | INFO     | [data] copytool_out thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,853 | INFO     | [data] control thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,970 | INFO     | [payload] failed_post thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:20,984 | INFO     | [payload] validate_post thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:21,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:21,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 12:06:22] 2026-02-28 20:05:25,503 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 12:06:22] 2026-02-28 20:05:48,259 | INFO     | PID=3533130 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 12:06:22] 2026-02-28 20:05:48,259 | INFO     | .. there are 19 such processes running
[2026-02-28 12:06:22] 2026-02-28 20:05:48,271 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 12:06:22] 2026-02-28 20:05:48,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 12:06:22] 2026-02-28 20:05:48,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 12:06:22] 2026-02-28 20:06:14,917 | INFO     | [monitor] cgroup control has ended
[2026-02-28 12:06:22] 2026-02-28 20:06:15,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300423329600)>', '<ExcThread(monitor, started 140299133253376)>']
[2026-02-28 12:06:22] 2026-02-28 20:06:15,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 12:06:22] 2026-02-28 20:06:15,434 | INFO     | [monitor] control thread has ended
[2026-02-28 12:06:22] 2026-02-28 20:06:20,367 | INFO     | all workflow threads have been joined
[2026-02-28 12:06:22] 2026-02-28 20:06:20,367 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 12:06:22] 2026-02-28 20:06:20,367 | INFO     | traces error code: 0
[2026-02-28 12:06:22] 2026-02-28 20:06:20,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 12:06:22] 2026-02-28 20:06:21,179 [wrapper] ==== pilot stdout END ====
[2026-02-28 12:06:22] 2026-02-28 20:06:21,209 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 12:06:22] 2026-02-28 20:06:21,242 [wrapper] pilotpid: 3533130
[2026-02-28 12:06:22] 2026-02-28 20:06:21,274 [wrapper] Pilot exit status: 0
[2026-02-28 12:06:22] 2026-02-28 20:06:21,385 [wrapper] pandaids: 7033408314
[2026-02-28 12:06:22] 2026-02-28 20:06:21,768 [wrapper] cleanup supervisor_pilot 3533136 3533131
[2026-02-28 12:06:22] 2026-02-28 20:06:21,806 [wrapper] Test setup, not cleaning
[2026-02-28 12:06:22] 2026-02-28 20:06:21,848 [wrapper] apfmon messages muted
[2026-02-28 12:06:22] 2026-02-28 20:06:21,901 [wrapper] ==== wrapper stdout END ====
[2026-02-28 12:06:22] 2026-02-28 20:06:21,942 [wrapper] ==== wrapper stderr END ====
[2026-02-28 12:06:22]  *** Error codes and diagnostics ***
[2026-02-28 12:06:22]     "exeErrorCode": 65,
[2026-02-28 12:06:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-28 12:06:22]     "pilotErrorCode": 1305,
[2026-02-28 12:06:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-28 12:06:22]  *** Listing of results directory ***
[2026-02-28 12:06:22] total 190816
[2026-02-28 12:06:22] -rwx------. 1 boinc boinc     36322 Feb 28 05:55 runpilot2-wrapper.sh
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc    584627 Feb 28 05:58 pilot3.tar.gz
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc      5111 Feb 28 05:58 queuedata.json
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc       100 Feb 28 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 12:06:22] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 11:55 run_atlas
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc       105 Feb 28 11:55 job.xml
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc      6444 Feb 28 11:55 init_data.xml
[2026-02-28 12:06:22] -rw-r--r--. 2 boinc boinc 191209204 Feb 28 11:55 EVNT.48700920._000057.pool.root.1
[2026-02-28 12:06:22] -rw-r--r--. 2 boinc boinc     15845 Feb 28 11:55 start_atlas.sh
[2026-02-28 12:06:22] drwxrwx--x. 2 boinc boinc      4096 Feb 28 11:55 shared
[2026-02-28 12:06:22] -rw-r--r--. 2 boinc boinc    597932 Feb 28 11:55 input.tar.gz
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc         0 Feb 28 11:55 boinc_lockfile
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc      2516 Feb 28 11:55 pandaJob.out
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc    998790 Feb 28 11:57 agis_schedconf.cvmfs.json
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc   1513015 Feb 28 11:57 agis_ddmendpoints.agis.ALL.json
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc       442 Feb 28 11:58 workernode_map.json
[2026-02-28 12:06:22] drwx------. 5 boinc boinc      4096 Feb 28 11:58 pilot3
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc       524 Feb 28 12:02 boinc_task_state.xml
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc       989 Feb 28 12:03 memory_monitor_summary.json
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc     23848 Feb 28 12:03 log.48700922._001413.job.log.tgz.1
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc      7052 Feb 28 12:05 heartbeat.json
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc        95 Feb 28 12:05 pilot_heartbeat.json
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc      4819 Feb 28 12:06 pilotlog.txt
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc      8192 Feb 28 12:06 boinc_mmap_file
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc        23 Feb 28 12:06 wrapper_checkpoint.txt
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc    109516 Feb 28 12:06 log.48700922._001413.job.log.1
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc       188 Feb 28 12:06 output.list
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc       620 Feb 28 12:06 runtime_log
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc    153600 Feb 28 12:06 result.tar.gz
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc       643 Feb 28 12:06 vPMLDmwxZG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlT7KDmzJJfnn.diag
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc      8633 Feb 28 12:06 runtime_log.err
[2026-02-28 12:06:22] -rw-r--r--. 1 boinc boinc     21939 Feb 28 12:06 stderr.txt
[2026-02-28 12:06:22] No HITS result produced
[2026-02-28 12:06:22]  *** Contents of shared directory: ***
[2026-02-28 12:06:22] total 187480
[2026-02-28 12:06:22] -rw-r--r--. 2 boinc boinc 191209204 Feb 28 11:55 ATLAS.root_0
[2026-02-28 12:06:22] -rw-r--r--. 2 boinc boinc     15845 Feb 28 11:55 start_atlas.sh
[2026-02-28 12:06:22] -rw-r--r--. 2 boinc boinc    597932 Feb 28 11:55 input.tar.gz
[2026-02-28 12:06:22] -rw-------. 1 boinc boinc    153600 Feb 28 12:06 result.tar.gz
12:06:24 (3529336): run_atlas exited; CPU time 31.733205
12:06:24 (3529336): called boinc_finish(0)

</stderr_txt>
]]>

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