Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:21 (67785): wrapper (7.7.26015): starting
14:40:21 (67785): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 14:40:21] Arguments: --nthreads 4
[2026-02-28 14:40:21] Threads: 4
[2026-02-28 14:40:21] Checking for CVMFS
[2026-02-28 14:40:21] No cvmfs_config command found, will try listing directly
[2026-02-28 14:40:21] CVMFS is ok
[2026-02-28 14:40:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 14:40:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 14:40:21] Further information can be found at the LHC@home message board.
[2026-02-28 14:40:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 14:40:21] Checking for apptainer binary...
[2026-02-28 14:40:21] which: no apptainer in ((null))
[2026-02-28 14:40:21] apptainer is not installed, using version from CVMFS
[2026-02-28 14:40:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 14:40:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-02-28 14:40:22] apptainer works
[2026-02-28 14:40:22] Set ATHENA_PROC_NUMBER=4
[2026-02-28 14:40:22] Set ATHENA_CORE_NUMBER=4
[2026-02-28 14:40:22] Starting ATLAS job with PandaID=7032738323
[2026-02-28 14:40:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 16:51:02]  *** The last 200 lines of the pilot log: ***
[2026-02-28 16:51:02] 2026-02-28 15:49:56,346 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_17624/.job.ad'
[2026-02-28 16:51:02] 2026-02-28 15:49:56,346 | INFO     | total number of processed events: 400 (read)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,371 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7032738323/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,372 | INFO     | extracted standard info from prmon json
[2026-02-28 16:51:02] 2026-02-28 15:49:56,372 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 16:51:02] 2026-02-28 15:49:56,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 16:51:02] 2026-02-28 15:49:56,372 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 16:51:02] 2026-02-28 15:49:56,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 16:51:02] 2026-02-28 15:49:56,380 | INFO     | fitting pss+swap vs Time
[2026-02-28 16:51:02] 2026-02-28 15:49:56,380 | INFO     | sum of square deviations: 635130048.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | sum of deviations: 5107205174.999997
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | mean x: 1772289927.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | mean y: 2314105.5118110236
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | intersect: -14249016492.493164
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | chi2: 1.8901035846420537
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | sum of square deviations: 563026370.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,381 | INFO     | sum of deviations: 12772589950.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | mean x: 1772289774.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | mean y: 2329770.2377049183
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | intersect: -40203123738.18302
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | chi2: 1.0631589896394706
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | current chi2=1.0631589896394706 (change=43.75128441223443 %)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | sum of square deviations: 496597218.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | sum of deviations: 12161048023.000002
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | mean x: 1772289622.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | mean y: 2328365.547008547
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | intersect: -43398839467.428085
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | chi2: 1.0643670007438042
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | current chi2=1.0643670007438042 (change=-0.11362468982585576 %)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,382 | INFO     | right removable region: 116
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | sum of square deviations: 563026370.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | sum of deviations: -5996848817.000002
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | mean x: 1772290079.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | mean y: 2336966.393442623
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | intersect: 18879171557.98104
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | chi2: 0.8551038089864754
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | current chi2=0.8551038089864754 (change=54.75889173828459 %)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,383 | INFO     | sum of square deviations: 496597218.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | sum of deviations: -6324501777.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | mean x: 1772290232.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | mean y: 2337712.752136752
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | intersect: 22573653691.497196
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | chi2: 0.8552822066747906
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | current chi2=0.8552822066747906 (change=-0.020862693680037278 %)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | left removable region: 20
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | sum of square deviations: 274312120.0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | sum of deviations: 253612227.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | mean x: 1772290201.5
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | mean y: 2357963.34375
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | intersect: -1636193281.7811058
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | chi2: 0.0002969174569872457
[2026-02-28 16:51:02] 2026-02-28 15:49:56,384 | INFO     | current memory leak: 0.92 B/s (using 96 data points, chi2=0.00)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | could have reported an average CPU frequency of 4415 MHz (8 samples)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | ..............................
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . Timing measurements:
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . get job = 0 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . initial setup = 6 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . payload setup = 16 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . stage-in = 0 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . payload execution = 7716 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . stage-out = 0 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | . log creation = 0 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,385 | INFO     | ..............................
[2026-02-28 16:51:02] 2026-02-28 15:49:56,445 | INFO     | 
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | job summary report
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | --------------------------------------------------
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | PanDA job id: 7032738323
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | task id: 48843073
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | errors: (none)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | pilot state: finished 
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | transexitcode: 0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | exeerrorcode: 0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | exeerrordiag: 
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | exitcode: 0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | exitmsg: OK
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | cpuconsumptiontime: 29823 s
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | nevents: 400
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | neventsw: 0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | pid: 879114
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | pgrp: 879114
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | corecount: 4
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | event service: False
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | sizes: {0: 2282359, 10: 2282359, 7736: 2310070, 7738: 2319090, 7741: 2319146, 7742: 2319340}
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | --------------------------------------------------
[2026-02-28 16:51:02] 2026-02-28 15:49:56,446 | INFO     | 
[2026-02-28 16:51:02] 2026-02-28 15:49:56,447 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-02-28 16:51:02] 2026-02-28 15:49:56,471 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,471 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,471 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | job 7032738323 has completed (purged errors)
[2026-02-28 16:51:02] 2026-02-28 15:49:56,472 | INFO     | overall cleanup function is called
[2026-02-28 16:51:02] 2026-02-28 15:49:56,957 | INFO     | PID=384872 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 16:51:02] 2026-02-28 15:49:56,957 | INFO     | .. there are 58 such processes running
[2026-02-28 16:51:02] 2026-02-28 15:49:57,479 | INFO     | --- collectZombieJob: --- 10, [879114]
[2026-02-28 16:51:02] 2026-02-28 15:49:57,479 | INFO     | zombie collector waiting for pid 879114
[2026-02-28 16:51:02] 2026-02-28 15:49:57,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 16:51:02] 2026-02-28 15:49:57,479 | INFO     | collected zombie processes
[2026-02-28 16:51:02] 2026-02-28 15:49:57,479 | INFO     | will attempt to kill all subprocesses of pid=879114
[2026-02-28 16:51:02] 2026-02-28 15:49:57,910 | INFO     | process IDs to be killed: [879114] (in reverse order)
[2026-02-28 16:51:02] 2026-02-28 15:49:58,141 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 16:51:02] 2026-02-28 15:49:58,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 16:51:02] 2026-02-28 15:49:58,167 | INFO     | did not find any defunct processes belonging to 879114
[2026-02-28 16:51:02] 2026-02-28 15:49:58,205 | INFO     | did not find any defunct processes belonging to 879114
[2026-02-28 16:51:02] 2026-02-28 15:49:58,205 | INFO     | ready for new job
[2026-02-28 16:51:02] 2026-02-28 15:49:58,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 16:51:02] 2026-02-28 15:49:58,206 | INFO     | **************************************
[2026-02-28 16:51:02] 2026-02-28 15:49:58,206 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 16:51:02] 2026-02-28 15:49:58,207 | INFO     | **************************************
[2026-02-28 16:51:02] 2026-02-28 15:49:58,207 | INFO     | 
[2026-02-28 16:51:02] 2026-02-28 15:49:58,213 | INFO     | architecture information:
[2026-02-28 16:51:02] 2026-02-28 15:49:58,213 | INFO     | executing command: cat /etc/os-release
[2026-02-28 16:51:02] 2026-02-28 15:49:58,225 | INFO     | cat /etc/os-release:
[2026-02-28 16:51:02] NAME="CentOS Linux"
[2026-02-28 16:51:02] VERSION="7 (Core)"
[2026-02-28 16:51:02] ID="centos"
[2026-02-28 16:51:02] ID_LIKE="rhel fedora"
[2026-02-28 16:51:02] VERSION_ID="7"
[2026-02-28 16:51:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 16:51:02] ANSI_COLOR="0;31"
[2026-02-28 16:51:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 16:51:02] HOME_URL="https://www.centos.org/"
[2026-02-28 16:51:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 16:51:02] 
[2026-02-28 16:51:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 16:51:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 16:51:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 16:51:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 16:51:02] 
[2026-02-28 16:51:02] 2026-02-28 15:49:58,225 | INFO     | **************************************
[2026-02-28 16:51:02] 2026-02-28 15:49:58,730 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-02-28 16:51:02] 2026-02-28 15:49:58,750 | INFO     | sufficient remaining disk space (252981542912 B)
[2026-02-28 16:51:02] 2026-02-28 15:49:58,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 16:51:02] 2026-02-28 15:49:58,750 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 16:51:02] 2026-02-28 15:49:58,751 | INFO     | update_server=False
[2026-02-28 16:51:02] 2026-02-28 15:49:58,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 16:51:02] 2026-02-28 15:49:58,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 16:51:02] 2026-02-28 15:49:59,280 | INFO     | all job control threads have been joined
[2026-02-28 16:51:02] 2026-02-28 15:49:59,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 16:51:02] 2026-02-28 15:49:59,488 | INFO     | aborting loop
[2026-02-28 16:51:02] 2026-02-28 15:49:59,546 | INFO     | all data control threads have been joined
[2026-02-28 16:51:02] 2026-02-28 15:49:59,750 | INFO     | all payload control threads have been joined
[2026-02-28 16:51:02] 2026-02-28 15:49:59,756 | INFO     | [job] retrieve thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:49:59,899 | INFO     | [data] copytool_in thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:49:59,941 | INFO     | [payload] failed_post thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,222 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,286 | INFO     | [job] control thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,493 | INFO     | [job] job monitor thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,552 | INFO     | [data] control thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,590 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,756 | INFO     | [payload] control thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,758 | INFO     | [data] copytool_out thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:00,972 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:01,101 | INFO     | [job] validate thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:01,271 | INFO     | [payload] validate_post thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:01,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 16:51:02] 2026-02-28 15:50:01,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 16:51:02] 2026-02-28 15:50:02,460 | INFO     | [job] queue monitor thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:05,383 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 16:51:02] 2026-02-28 15:50:29,548 | INFO     | PID=384872 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 16:51:02] 2026-02-28 15:50:29,548 | INFO     | .. there are 58 such processes running
[2026-02-28 16:51:02] 2026-02-28 15:50:29,549 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 16:51:02] 2026-02-28 15:50:29,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 16:51:02] 2026-02-28 15:50:29,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 16:51:02] 2026-02-28 15:50:56,301 | INFO     | [monitor] cgroup control has ended
[2026-02-28 16:51:02] 2026-02-28 15:50:57,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23044495566656)>', '<ExcThread(monitor, started 23044258281216)>']
[2026-02-28 16:51:02] 2026-02-28 15:50:57,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 16:51:02] 2026-02-28 15:50:57,689 | INFO     | [monitor] control thread has ended
[2026-02-28 16:51:02] 2026-02-28 15:51:02,331 | INFO     | all workflow threads have been joined
[2026-02-28 16:51:02] 2026-02-28 15:51:02,332 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 16:51:02] 2026-02-28 15:51:02,332 | INFO     | traces error code: 0
[2026-02-28 16:51:02] 2026-02-28 15:51:02,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 16:51:02] 2026-02-28 15:51:02,445 [wrapper] ==== pilot stdout END ====
[2026-02-28 16:51:02] 2026-02-28 15:51:02,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 16:51:02] 2026-02-28 15:51:02,454 [wrapper] pilotpid: 384872
[2026-02-28 16:51:02] 2026-02-28 15:51:02,483 [wrapper] Pilot exit status: 0
[2026-02-28 16:51:02] 2026-02-28 15:51:02,531 [wrapper] pandaids: 7032738323
[2026-02-28 16:51:02] 2026-02-28 15:51:02,659 [wrapper] cleanup supervisor_pilot 2149345 384877
[2026-02-28 16:51:02] 2026-02-28 15:51:02,662 [wrapper] Test setup, not cleaning
[2026-02-28 16:51:02] 2026-02-28 15:51:02,664 [wrapper] apfmon messages muted
[2026-02-28 16:51:02] 2026-02-28 15:51:02,690 [wrapper] ==== wrapper stdout END ====
[2026-02-28 16:51:02] 2026-02-28 15:51:02,692 [wrapper] ==== wrapper stderr END ====
[2026-02-28 16:51:02]  *** Error codes and diagnostics ***
[2026-02-28 16:51:02]     "exeErrorCode": 0,
[2026-02-28 16:51:02]     "exeErrorDiag": "",
[2026-02-28 16:51:02]     "pilotErrorCode": 0,
[2026-02-28 16:51:02]     "pilotErrorDiag": "",
[2026-02-28 16:51:02]  *** Listing of results directory ***
[2026-02-28 16:51:02] total 528524
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc    584627 Feb 28 06:38 pilot3.tar.gz
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc      5111 Feb 28 06:40 queuedata.json
[2026-02-28 16:51:02] -rwx------. 1 boinc boinc     36322 Feb 28 06:40 runpilot2-wrapper.sh
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc       100 Feb 28 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 16:51:02] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 14:39 run_atlas
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc       105 Feb 28 14:39 job.xml
[2026-02-28 16:51:02] -rw-r--r--. 2 boinc boinc 288668504 Feb 28 14:40 EVNT.48450091._000006.pool.root.1
[2026-02-28 16:51:02] -rw-r--r--. 2 boinc boinc     15845 Feb 28 14:40 start_atlas.sh
[2026-02-28 16:51:02] drwxrwx--x. 2 boinc boinc      4096 Feb 28 14:40 shared
[2026-02-28 16:51:02] -rw-r--r--. 2 boinc boinc    597972 Feb 28 14:40 input.tar.gz
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc      6698 Feb 28 14:40 init_data.xml
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc         0 Feb 28 14:40 boinc_lockfile
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc      2623 Feb 28 14:40 pandaJob.out
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc    998790 Feb 28 14:40 agis_schedconf.cvmfs.json
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc   1513015 Feb 28 14:40 agis_ddmendpoints.agis.ALL.json
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc       443 Feb 28 14:40 workernode_map.json
[2026-02-28 16:51:02] drwx------. 5 boinc boinc      4096 Feb 28 14:40 pilot3
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc       529 Feb 28 16:49 boinc_task_state.xml
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc 245800601 Feb 28 16:49 HITS.48843073._000052.pool.root.1
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc      1030 Feb 28 16:49 memory_monitor_summary.json
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc    296861 Feb 28 16:49 log.48843073._000052.job.log.tgz.1
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc      6339 Feb 28 16:49 heartbeat.json
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc        95 Feb 28 16:50 pilot_heartbeat.json
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc      8192 Feb 28 16:50 boinc_mmap_file
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc        27 Feb 28 16:50 wrapper_checkpoint.txt
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc      4829 Feb 28 16:51 pilotlog.txt
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc   1107901 Feb 28 16:51 log.48843073._000052.job.log.1
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc       357 Feb 28 16:51 output.list
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc       620 Feb 28 16:51 runtime_log
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc   1423360 Feb 28 16:51 result.tar.gz
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc      9204 Feb 28 16:51 runtime_log.err
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc       663 Feb 28 16:51 jbKKDmpESG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMh4KDmFPBhsm.diag
[2026-02-28 16:51:02] -rw-r--r--. 1 boinc boinc     20962 Feb 28 16:51 stderr.txt
[2026-02-28 16:51:02] HITS file was successfully produced:
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc 245800601 Feb 28 16:49 shared/HITS.pool.root.1
[2026-02-28 16:51:02]  *** Contents of shared directory: ***
[2026-02-28 16:51:02] total 523944
[2026-02-28 16:51:02] -rw-r--r--. 2 boinc boinc 288668504 Feb 28 14:40 ATLAS.root_0
[2026-02-28 16:51:02] -rw-r--r--. 2 boinc boinc     15845 Feb 28 14:40 start_atlas.sh
[2026-02-28 16:51:02] -rw-r--r--. 2 boinc boinc    597972 Feb 28 14:40 input.tar.gz
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc 245800601 Feb 28 16:49 HITS.pool.root.1
[2026-02-28 16:51:02] -rw-------. 1 boinc boinc   1423360 Feb 28 16:51 result.tar.gz
16:51:04 (67785): run_atlas exited; CPU time 30095.305851
16:51:04 (67785): called boinc_finish(0)

</stderr_txt>
]]>

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