Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
14:40:23 (27432): wrapper (7.7.26015): starting
14:40:23 (27432): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 14:40:23] Arguments: --nthreads 4
[2026-02-28 14:40:23] Threads: 4
[2026-02-28 14:40:23] Checking for CVMFS
[2026-02-28 14:40:23] No cvmfs_config command found, will try listing directly
[2026-02-28 14:40:23] CVMFS is ok
[2026-02-28 14:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 14:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 14:40:23] Further information can be found at the LHC@home message board.
[2026-02-28 14:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 14:40:23] Checking for apptainer binary...
[2026-02-28 14:40:23] which: no apptainer in ((null))
[2026-02-28 14:40:23] apptainer is not installed, using version from CVMFS
[2026-02-28 14:40:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 14:40:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-02-28 14:40:24] apptainer works
[2026-02-28 14:40:24] Set ATHENA_PROC_NUMBER=4
[2026-02-28 14:40:24] Set ATHENA_CORE_NUMBER=4
[2026-02-28 14:40:24] Starting ATLAS job with PandaID=7032912691
[2026-02-28 14:40:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:23:08 (3232780): wrapper (7.7.26015): starting
04:23:08 (3232780): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 04:23:08] Arguments: --nthreads 4
[2026-03-07 04:23:08] Threads: 4
[2026-03-07 04:23:08] This job has been restarted, cleaning up previous attempt
[2026-03-07 04:23:08] Checking for CVMFS
[2026-03-07 04:23:08] No cvmfs_config command found, will try listing directly
[2026-03-07 04:23:08] CVMFS is ok
[2026-03-07 04:23:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 04:23:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 04:23:08] Further information can be found at the LHC@home message board.
[2026-03-07 04:23:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 04:23:08] Checking for apptainer binary...
[2026-03-07 04:23:08] which: no apptainer in ((null))
[2026-03-07 04:23:08] apptainer is not installed, using version from CVMFS
[2026-03-07 04:23:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 04:23:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-07 04:23:09] apptainer works
[2026-03-07 04:23:09] Set ATHENA_PROC_NUMBER=4
[2026-03-07 04:23:09] Set ATHENA_CORE_NUMBER=4
[2026-03-07 04:23:09] Starting ATLAS job with PandaID=7032912691
[2026-03-07 04:23:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 04:26:15] Job failed
[2026-03-07 04:26:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-07 04:26:15] ++ pwd
[2026-03-07 04:26:15] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 04:26:15] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 04:26:15] + mv ATLAS.root_0 EVNT.48447555._000002.pool.root.1
[2026-03-07 04:26:15] mv: 'ATLAS.root_0' and 'EVNT.48447555._000002.pool.root.1' are the same file
[2026-03-07 04:26:15] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-07 04:26:15] + umask 077
[2026-03-07 04:26:15] ++ date +%s
[2026-03-07 04:26:15] + ACCOUNTING_STARTTIME=1772853789
[2026-03-07 04:26:15] + echo 'Detecting resource accounting method available for the job.'
[2026-03-07 04:26:15] Detecting resource accounting method available for the job.
[2026-03-07 04:26:15] + JOB_ACCOUNTING=
[2026-03-07 04:26:15] + command -v arc-job-cgroup
[2026-03-07 04:26:15] + '[' -z '' ']'
[2026-03-07 04:26:15] + GNU_TIME=/usr/bin/time
[2026-03-07 04:26:15] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-07 04:26:15] Looking for /usr/bin/time tool for accounting measurements
[2026-03-07 04:26:15] + '[' '!' -z /usr/bin/time ']'
[2026-03-07 04:26:15] + /usr/bin/time --version
[2026-03-07 04:26:15] + echo 'GNU time found and will be used for job accounting.'
[2026-03-07 04:26:15] GNU time found and will be used for job accounting.
[2026-03-07 04:26:15] + JOB_ACCOUNTING=gnutime
[2026-03-07 04:26:15] + '[' -z gnutime ']'
[2026-03-07 04:26:15] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-07 04:26:15] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-07 04:26:15] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-07 04:26:15] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-07 04:26:15] + export PILOT_NOKILL=YES
[2026-03-07 04:26:15] + PILOT_NOKILL=YES
[2026-03-07 04:26:15] + export GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 04:26:15] + GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 04:26:15] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 04:26:15] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 04:26:15] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-07 04:26:15] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-07 04:26:15] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-07 04:26:15] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-07 04:26:15] ++ pwd
[2026-03-07 04:26:15] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot12/slots/0
[2026-03-07 04:26:15] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-07 04:26:15] ++ pwd
[2026-03-07 04:26:15] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-07 04:26:15] ++ pwd
[2026-03-07 04:26:15] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-07 04:26:15] ++ pwd
[2026-03-07 04:26:15] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0.diag
[2026-03-07 04:26:15] + '[' '!' -z '' ']'
[2026-03-07 04:26:15] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-07 04:26:15] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-07 04:26:15] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-07 04:26:15] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-07 04:26:15] + '[' '!' -z '' ']'
[2026-03-07 04:26:15] + '[' -z yes ']'
[2026-03-07 04:26:15] ++ pwd
[2026-03-07 04:26:15] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-07 04:26:15] + runtimeenvironments=
[2026-03-07 04:26:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-07 04:26:15] + RTE_function_0 1
[2026-03-07 04:26:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 04:26:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 04:26:15] + export BOINC_APP=ATLAS
[2026-03-07 04:26:15] + BOINC_APP=ATLAS
[2026-03-07 04:26:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 04:26:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 04:26:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 04:26:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 04:26:15] + '[' -z 1 ']'
[2026-03-07 04:26:15] + '[' 1 == 1 ']'
[2026-03-07 04:26:15] + shift
[2026-03-07 04:26:15] + export SITE_NAME=BOINC
[2026-03-07 04:26:15] + SITE_NAME=BOINC
[2026-03-07 04:26:15] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 04:26:15] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 04:26:15] + '[' -e /var/lib/boinc/var/slot12/slots/0/init_data.xml ']'
[2026-03-07 04:26:15] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot12/slots/0/init_data.xml
[2026-03-07 04:26:15] + '[' 0 -ne 0 ']'
[2026-03-07 04:26:15] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-07 04:26:15] + '[' -f /etc/os-release ']'
[2026-03-07 04:26:15] +++ cat /etc/os-release
[2026-03-07 04:26:15] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-07 04:26:15] +++ NAME='CentOS Linux'
[2026-03-07 04:26:15] +++ VERSION='7 (Core)'
[2026-03-07 04:26:15] +++ ID=centos
[2026-03-07 04:26:15] +++ ID_LIKE='rhel fedora'
[2026-03-07 04:26:15] +++ VERSION_ID=7
[2026-03-07 04:26:15] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-07 04:26:15] +++ ANSI_COLOR='0;31'
[2026-03-07 04:26:15] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-07 04:26:15] +++ HOME_URL=https://www.centos.org/
[2026-03-07 04:26:15] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-07 04:26:15] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-07 04:26:15] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-07 04:26:15] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-07 04:26:15] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-07 04:26:15] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-07 04:26:15] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-07 04:26:15] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-07 04:26:15] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-07 04:26:15] + HOME=/var/lib/boinc/var/slot12/slots/0
[2026-03-07 04:26:15] + export HOME
[2026-03-07 04:26:15] + cd /var/lib/boinc/var/slot12/slots/0
[2026-03-07 04:26:15] + '[' '!' -z '' ']'
[2026-03-07 04:26:15] + '[' -z '' ']'
[2026-03-07 04:26:15] ++ /bin/hostname -f
[2026-03-07 04:26:15] + nodename=skurut22.grid.cesnet.cz
[2026-03-07 04:26:15] + echo nodename=skurut22.grid.cesnet.cz
[2026-03-07 04:26:15] + echo Processors=2
[2026-03-07 04:26:15] + echo Nodecount=1
[2026-03-07 04:26:15] + echo Benchmark=HEPSPEC:1.0
[2026-03-07 04:26:15] + executable=./runpilot2-wrapper.sh
[2026-03-07 04:26:15] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-07 04:26:15] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-07 04:26:15] ++ head -n 1
[2026-03-07 04:26:15] ++ tr -d '\0'
[2026-03-07 04:26:15] + line1='#!/bin/bash'
[2026-03-07 04:26:15] ++ echo '#!/bin/bash'
[2026-03-07 04:26:15] ++ sed -n 's/^#! *//p'
[2026-03-07 04:26:15] + shebang=/bin/bash
[2026-03-07 04:26:15] ++ echo /bin/bash
[2026-03-07 04:26:15] ++ awk '{print $1}'
[2026-03-07 04:26:15] + interpreter=/bin/bash
[2026-03-07 04:26:15] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-07 04:26:15] + '[' x/bin/bash = x ']'
[2026-03-07 04:26:15] + type /bin/bash
[2026-03-07 04:26:15] + '[' xgnutime = xgnutime ']'
[2026-03-07 04:26:15] + /usr/bin/time -o /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-07 04:26:15] + RESULT=2
[2026-03-07 04:26:15] + sed -i -e /nodename=/d /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-07 04:26:15] ++ grep domain_name init_data.xml
[2026-03-07 04:26:15] ++ awk -F '>' '{print $2}'
[2026-03-07 04:26:15] ++ awk -F '<' '{print $1}'
[2026-03-07 04:26:15] ++ sed -e 's# #_#g'
[2026-03-07 04:26:15] + hostname=skurut22.grid.cesnet.cz
[2026-03-07 04:26:15] ++ grep user_name init_data.xml
[2026-03-07 04:26:15] ++ awk -F '>' '{print $2}'
[2026-03-07 04:26:15] ++ awk -F '<' '{print $1}'
[2026-03-07 04:26:15] ++ sed -e 's# #_#g'
[2026-03-07 04:26:15] + username=praguelcg2
[2026-03-07 04:26:15] + nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-07 04:26:15] + echo nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-07 04:26:15] + '[' -n 4 ']'
[2026-03-07 04:26:15] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-07 04:26:15] + echo exitcode=2
[2026-03-07 04:26:15] + runtimeenvironments=
[2026-03-07 04:26:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-07 04:26:15] + RTE_function_0 2
[2026-03-07 04:26:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 04:26:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 04:26:15] + export BOINC_APP=ATLAS
[2026-03-07 04:26:15] + BOINC_APP=ATLAS
[2026-03-07 04:26:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 04:26:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 04:26:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 04:26:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 04:26:15] + '[' -z 2 ']'
[2026-03-07 04:26:15] + '[' 2 == 1 ']'
[2026-03-07 04:26:15] + '[' 0 -ne 0 ']'
[2026-03-07 04:26:15] + echo 'zip all output files'
[2026-03-07 04:26:15] + flist='*.diag '
[2026-03-07 04:26:15] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 04:26:15] + '[' -e ./heartbeat.json ']'
[2026-03-07 04:26:15] + flist='*.diag  ./heartbeat.json'
[2026-03-07 04:26:15] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 04:26:15] + '[' -e ./output.list ']'
[2026-03-07 04:26:15] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 04:26:15] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-07 04:26:15] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1'
[2026-03-07 04:26:15] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 04:26:15] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-07 04:26:15] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1'
[2026-03-07 04:26:15] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 04:26:15] + '[' -e ./gmlog/ ']'
[2026-03-07 04:26:15] + '[' -f output.list ']'
[2026-03-07 04:26:15] + tar cvf result.tar.gz VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1
[2026-03-07 04:26:15] + '[' xgnutime = xcgroup ']'
[2026-03-07 04:26:15] + '[' -n '' ']'
[2026-03-07 04:26:15] + '[' -n '' ']'
[2026-03-07 04:26:15] ++ date +%s
[2026-03-07 04:26:15] + ACCOUNTING_ENDTIME=1772853975
[2026-03-07 04:26:15] ++ date -d '1970-01-01 UTC 1772853789 seconds' +%Y%m%d%H%M%SZ
[2026-03-07 04:26:15] + echo LRMSStartTime=20260307042309Z
[2026-03-07 04:26:15] ++ date -d '1970-01-01 UTC 1772853975 seconds' +%Y%m%d%H%M%SZ
[2026-03-07 04:26:15] + echo LRMSEndTime=20260307042615Z
[2026-03-07 04:26:15] + echo walltime=186
[2026-03-07 04:26:15] + echo exitcode=2
[2026-03-07 04:26:15] + exit 2
[2026-03-07 04:26:15] ./PanDA_Pilot-7032912691/PoolFileCatalog.xml
[2026-03-07 04:26:15] ./PanDA_Pilot-7032912691/log.EVNTtoHITS
[2026-03-07 04:26:15] ./PanDA_Pilot-7032912691/prmon.log
[2026-03-07 04:26:15] ./PanDA_Pilot-7032912691/pilotlog.txt
[2026-03-07 04:26:15] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-07 04:26:15] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-07 04:26:15] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-07 04:26:15] ./pilot3/pilot/util/realtimelogger.py
[2026-03-07 04:26:15] ./pilot3/pilot/util/loggingsupport.py
[2026-03-07 04:26:15] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-07 04:26:15] ./runtime_log.err
[2026-03-07 04:26:15] ./log.48843205._000027.job.log.1
[2026-03-07 04:26:15] ./pilotlog.txt
[2026-03-07 04:26:15] ./runtime_log
06:45:26 (536304): wrapper (7.7.26015): starting
06:45:26 (536304): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 06:45:26] Arguments: --nthreads 4
[2026-03-07 06:45:26] Threads: 4
[2026-03-07 06:45:26] This job has been restarted, cleaning up previous attempt
[2026-03-07 06:45:26] Checking for CVMFS
[2026-03-07 06:45:26] No cvmfs_config command found, will try listing directly
[2026-03-07 06:45:26] CVMFS is ok
[2026-03-07 06:45:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 06:45:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 06:45:26] Further information can be found at the LHC@home message board.
[2026-03-07 06:45:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 06:45:26] Checking for apptainer binary...
[2026-03-07 06:45:26] which: no apptainer in ((null))
[2026-03-07 06:45:26] apptainer is not installed, using version from CVMFS
[2026-03-07 06:45:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 06:45:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-07 06:45:26] apptainer works
[2026-03-07 06:45:26] Set ATHENA_PROC_NUMBER=4
[2026-03-07 06:45:26] Set ATHENA_CORE_NUMBER=4
[2026-03-07 06:45:26] Starting ATLAS job with PandaID=7032912691
[2026-03-07 06:45:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:48:34] Job failed
[2026-03-07 06:48:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-07 06:48:34] ++ pwd
[2026-03-07 06:48:34] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 06:48:34] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 06:48:34] + mv ATLAS.root_0 EVNT.48447555._000002.pool.root.1
[2026-03-07 06:48:34] mv: 'ATLAS.root_0' and 'EVNT.48447555._000002.pool.root.1' are the same file
[2026-03-07 06:48:34] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-07 06:48:34] + umask 077
[2026-03-07 06:48:34] ++ date +%s
[2026-03-07 06:48:34] + ACCOUNTING_STARTTIME=1772862327
[2026-03-07 06:48:34] + echo 'Detecting resource accounting method available for the job.'
[2026-03-07 06:48:34] Detecting resource accounting method available for the job.
[2026-03-07 06:48:34] + JOB_ACCOUNTING=
[2026-03-07 06:48:34] + command -v arc-job-cgroup
[2026-03-07 06:48:34] + '[' -z '' ']'
[2026-03-07 06:48:34] + GNU_TIME=/usr/bin/time
[2026-03-07 06:48:34] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-07 06:48:34] Looking for /usr/bin/time tool for accounting measurements
[2026-03-07 06:48:34] + '[' '!' -z /usr/bin/time ']'
[2026-03-07 06:48:34] + /usr/bin/time --version
[2026-03-07 06:48:34] + echo 'GNU time found and will be used for job accounting.'
[2026-03-07 06:48:34] GNU time found and will be used for job accounting.
[2026-03-07 06:48:34] + JOB_ACCOUNTING=gnutime
[2026-03-07 06:48:34] + '[' -z gnutime ']'
[2026-03-07 06:48:34] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-07 06:48:34] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-07 06:48:34] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-07 06:48:34] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-07 06:48:34] + export PILOT_NOKILL=YES
[2026-03-07 06:48:34] + PILOT_NOKILL=YES
[2026-03-07 06:48:34] + export GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 06:48:34] + GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 06:48:34] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 06:48:34] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-07 06:48:34] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-07 06:48:34] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-07 06:48:34] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-07 06:48:34] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-07 06:48:34] ++ pwd
[2026-03-07 06:48:34] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot12/slots/0
[2026-03-07 06:48:34] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-07 06:48:34] ++ pwd
[2026-03-07 06:48:34] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-07 06:48:34] ++ pwd
[2026-03-07 06:48:34] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-07 06:48:34] ++ pwd
[2026-03-07 06:48:34] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0.diag
[2026-03-07 06:48:34] + '[' '!' -z '' ']'
[2026-03-07 06:48:34] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-07 06:48:34] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-07 06:48:34] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-07 06:48:34] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-07 06:48:34] + '[' '!' -z '' ']'
[2026-03-07 06:48:34] + '[' -z yes ']'
[2026-03-07 06:48:34] ++ pwd
[2026-03-07 06:48:34] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-07 06:48:34] + runtimeenvironments=
[2026-03-07 06:48:34] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-07 06:48:34] + RTE_function_0 1
[2026-03-07 06:48:34] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 06:48:34] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 06:48:34] + export BOINC_APP=ATLAS
[2026-03-07 06:48:34] + BOINC_APP=ATLAS
[2026-03-07 06:48:34] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 06:48:34] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 06:48:34] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 06:48:34] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 06:48:34] + '[' -z 1 ']'
[2026-03-07 06:48:34] + '[' 1 == 1 ']'
[2026-03-07 06:48:34] + shift
[2026-03-07 06:48:34] + export SITE_NAME=BOINC
[2026-03-07 06:48:34] + SITE_NAME=BOINC
[2026-03-07 06:48:34] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 06:48:34] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-07 06:48:34] + '[' -e /var/lib/boinc/var/slot12/slots/0/init_data.xml ']'
[2026-03-07 06:48:34] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot12/slots/0/init_data.xml
[2026-03-07 06:48:34] + '[' 0 -ne 0 ']'
[2026-03-07 06:48:34] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-07 06:48:34] + '[' -f /etc/os-release ']'
[2026-03-07 06:48:34] +++ cat /etc/os-release
[2026-03-07 06:48:34] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-07 06:48:34] +++ NAME='CentOS Linux'
[2026-03-07 06:48:34] +++ VERSION='7 (Core)'
[2026-03-07 06:48:34] +++ ID=centos
[2026-03-07 06:48:34] +++ ID_LIKE='rhel fedora'
[2026-03-07 06:48:34] +++ VERSION_ID=7
[2026-03-07 06:48:34] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-07 06:48:34] +++ ANSI_COLOR='0;31'
[2026-03-07 06:48:34] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-07 06:48:34] +++ HOME_URL=https://www.centos.org/
[2026-03-07 06:48:34] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-07 06:48:34] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-07 06:48:34] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-07 06:48:34] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-07 06:48:34] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-07 06:48:34] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-07 06:48:34] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-07 06:48:34] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-07 06:48:34] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-07 06:48:34] + HOME=/var/lib/boinc/var/slot12/slots/0
[2026-03-07 06:48:34] + export HOME
[2026-03-07 06:48:34] + cd /var/lib/boinc/var/slot12/slots/0
[2026-03-07 06:48:34] + '[' '!' -z '' ']'
[2026-03-07 06:48:34] + '[' -z '' ']'
[2026-03-07 06:48:34] ++ /bin/hostname -f
[2026-03-07 06:48:34] + nodename=skurut22.grid.cesnet.cz
[2026-03-07 06:48:34] + echo nodename=skurut22.grid.cesnet.cz
[2026-03-07 06:48:34] + echo Processors=2
[2026-03-07 06:48:34] + echo Nodecount=1
[2026-03-07 06:48:34] + echo Benchmark=HEPSPEC:1.0
[2026-03-07 06:48:34] + executable=./runpilot2-wrapper.sh
[2026-03-07 06:48:34] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-07 06:48:34] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-07 06:48:34] ++ head -n 1
[2026-03-07 06:48:34] ++ tr -d '\0'
[2026-03-07 06:48:34] + line1='#!/bin/bash'
[2026-03-07 06:48:34] ++ echo '#!/bin/bash'
[2026-03-07 06:48:34] ++ sed -n 's/^#! *//p'
[2026-03-07 06:48:34] + shebang=/bin/bash
[2026-03-07 06:48:34] ++ echo /bin/bash
[2026-03-07 06:48:34] ++ awk '{print $1}'
[2026-03-07 06:48:34] + interpreter=/bin/bash
[2026-03-07 06:48:34] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-07 06:48:34] + '[' x/bin/bash = x ']'
[2026-03-07 06:48:34] + type /bin/bash
[2026-03-07 06:48:34] + '[' xgnutime = xgnutime ']'
[2026-03-07 06:48:34] + /usr/bin/time -o /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-07 06:48:34] + RESULT=2
[2026-03-07 06:48:34] + sed -i -e /nodename=/d /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-07 06:48:34] ++ grep domain_name init_data.xml
[2026-03-07 06:48:34] ++ awk -F '>' '{print $2}'
[2026-03-07 06:48:34] ++ sed -e 's# #_#g'
[2026-03-07 06:48:34] ++ awk -F '<' '{print $1}'
[2026-03-07 06:48:34] + hostname=skurut22.grid.cesnet.cz
[2026-03-07 06:48:34] ++ grep user_name init_data.xml
[2026-03-07 06:48:34] ++ awk -F '>' '{print $2}'
[2026-03-07 06:48:34] ++ sed -e 's# #_#g'
[2026-03-07 06:48:34] ++ awk -F '<' '{print $1}'
[2026-03-07 06:48:34] + username=praguelcg2
[2026-03-07 06:48:34] + nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-07 06:48:34] + echo nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-07 06:48:34] + '[' -n 4 ']'
[2026-03-07 06:48:34] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-07 06:48:34] + echo exitcode=2
[2026-03-07 06:48:34] + runtimeenvironments=
[2026-03-07 06:48:34] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-07 06:48:34] + RTE_function_0 2
[2026-03-07 06:48:34] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 06:48:34] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-07 06:48:34] + export BOINC_APP=ATLAS
[2026-03-07 06:48:34] + BOINC_APP=ATLAS
[2026-03-07 06:48:34] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 06:48:34] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-07 06:48:34] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 06:48:34] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-07 06:48:34] + '[' -z 2 ']'
[2026-03-07 06:48:34] + '[' 2 == 1 ']'
[2026-03-07 06:48:34] + '[' 0 -ne 0 ']'
[2026-03-07 06:48:34] + echo 'zip all output files'
[2026-03-07 06:48:34] + flist='*.diag '
[2026-03-07 06:48:34] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 06:48:34] + '[' -e ./heartbeat.json ']'
[2026-03-07 06:48:34] + flist='*.diag  ./heartbeat.json'
[2026-03-07 06:48:34] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 06:48:34] + '[' -e ./output.list ']'
[2026-03-07 06:48:34] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 06:48:34] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-07 06:48:34] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1'
[2026-03-07 06:48:34] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 06:48:34] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-07 06:48:34] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1'
[2026-03-07 06:48:34] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-07 06:48:34] + '[' -e ./gmlog/ ']'
[2026-03-07 06:48:34] + '[' -f output.list ']'
[2026-03-07 06:48:34] + tar cvf result.tar.gz VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1
[2026-03-07 06:48:34] + '[' xgnutime = xcgroup ']'
[2026-03-07 06:48:34] + '[' -n '' ']'
[2026-03-07 06:48:34] + '[' -n '' ']'
[2026-03-07 06:48:34] ++ date +%s
[2026-03-07 06:48:34] + ACCOUNTING_ENDTIME=1772862514
[2026-03-07 06:48:34] ++ date -d '1970-01-01 UTC 1772862327 seconds' +%Y%m%d%H%M%SZ
[2026-03-07 06:48:34] + echo LRMSStartTime=20260307064527Z
[2026-03-07 06:48:34] ++ date -d '1970-01-01 UTC 1772862514 seconds' +%Y%m%d%H%M%SZ
[2026-03-07 06:48:34] + echo LRMSEndTime=20260307064834Z
[2026-03-07 06:48:34] + echo walltime=187
[2026-03-07 06:48:34] + echo exitcode=2
[2026-03-07 06:48:34] + exit 2
[2026-03-07 06:48:34] ./PanDA_Pilot-7032912691/PoolFileCatalog.xml
[2026-03-07 06:48:34] ./PanDA_Pilot-7032912691/log.EVNTtoHITS
[2026-03-07 06:48:34] ./PanDA_Pilot-7032912691/prmon.log
[2026-03-07 06:48:34] ./PanDA_Pilot-7032912691/pilotlog.txt
[2026-03-07 06:48:34] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-07 06:48:34] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-07 06:48:34] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-07 06:48:34] ./pilot3/pilot/util/realtimelogger.py
[2026-03-07 06:48:34] ./pilot3/pilot/util/loggingsupport.py
[2026-03-07 06:48:34] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-07 06:48:34] ./runtime_log.err
[2026-03-07 06:48:34] ./log.48843205._000027.job.log.1
[2026-03-07 06:48:34] ./pilotlog.txt
[2026-03-07 06:48:34] ./runtime_log
11:56:01 (196616): wrapper (7.7.26015): starting
11:56:01 (196616): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 11:56:01] Arguments: --nthreads 4
[2026-03-08 11:56:01] Threads: 4
[2026-03-08 11:56:01] This job has been restarted, cleaning up previous attempt
[2026-03-08 11:56:01] Checking for CVMFS
[2026-03-08 11:56:01] No cvmfs_config command found, will try listing directly
[2026-03-08 11:56:01] CVMFS is ok
[2026-03-08 11:56:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 11:56:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 11:56:01] Further information can be found at the LHC@home message board.
[2026-03-08 11:56:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 11:56:01] Checking for apptainer binary...
[2026-03-08 11:56:01] which: no apptainer in ((null))
[2026-03-08 11:56:01] apptainer is not installed, using version from CVMFS
[2026-03-08 11:56:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 11:56:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-08 11:56:01] apptainer works
[2026-03-08 11:56:01] Set ATHENA_PROC_NUMBER=4
[2026-03-08 11:56:01] Set ATHENA_CORE_NUMBER=4
[2026-03-08 11:56:01] Starting ATLAS job with PandaID=7032912691
[2026-03-08 11:56:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 11:59:08] Job failed
[2026-03-08 11:59:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-08 11:59:08] ++ pwd
[2026-03-08 11:59:08] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-08 11:59:08] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-08 11:59:08] + mv ATLAS.root_0 EVNT.48447555._000002.pool.root.1
[2026-03-08 11:59:08] mv: 'ATLAS.root_0' and 'EVNT.48447555._000002.pool.root.1' are the same file
[2026-03-08 11:59:08] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-08 11:59:08] + umask 077
[2026-03-08 11:59:08] ++ date +%s
[2026-03-08 11:59:08] + ACCOUNTING_STARTTIME=1772967361
[2026-03-08 11:59:08] + echo 'Detecting resource accounting method available for the job.'
[2026-03-08 11:59:08] Detecting resource accounting method available for the job.
[2026-03-08 11:59:08] + JOB_ACCOUNTING=
[2026-03-08 11:59:08] + command -v arc-job-cgroup
[2026-03-08 11:59:08] + '[' -z '' ']'
[2026-03-08 11:59:08] + GNU_TIME=/usr/bin/time
[2026-03-08 11:59:08] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-08 11:59:08] Looking for /usr/bin/time tool for accounting measurements
[2026-03-08 11:59:08] + '[' '!' -z /usr/bin/time ']'
[2026-03-08 11:59:08] + /usr/bin/time --version
[2026-03-08 11:59:08] + echo 'GNU time found and will be used for job accounting.'
[2026-03-08 11:59:08] GNU time found and will be used for job accounting.
[2026-03-08 11:59:08] + JOB_ACCOUNTING=gnutime
[2026-03-08 11:59:08] + '[' -z gnutime ']'
[2026-03-08 11:59:08] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-08 11:59:08] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-08 11:59:08] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-08 11:59:08] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-08 11:59:08] + export PILOT_NOKILL=YES
[2026-03-08 11:59:08] + PILOT_NOKILL=YES
[2026-03-08 11:59:08] + export GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-08 11:59:08] + GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-08 11:59:08] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-08 11:59:08] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-08 11:59:08] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-08 11:59:08] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-08 11:59:08] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-08 11:59:08] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-08 11:59:08] ++ pwd
[2026-03-08 11:59:08] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot12/slots/0
[2026-03-08 11:59:08] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-08 11:59:08] ++ pwd
[2026-03-08 11:59:08] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-08 11:59:08] ++ pwd
[2026-03-08 11:59:08] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-08 11:59:08] ++ pwd
[2026-03-08 11:59:08] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0.diag
[2026-03-08 11:59:08] + '[' '!' -z '' ']'
[2026-03-08 11:59:08] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-08 11:59:08] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-08 11:59:08] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-08 11:59:08] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-08 11:59:08] + '[' '!' -z '' ']'
[2026-03-08 11:59:08] + '[' -z yes ']'
[2026-03-08 11:59:08] ++ pwd
[2026-03-08 11:59:08] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-08 11:59:08] + runtimeenvironments=
[2026-03-08 11:59:08] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-08 11:59:08] + RTE_function_0 1
[2026-03-08 11:59:08] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-08 11:59:08] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-08 11:59:08] + export BOINC_APP=ATLAS
[2026-03-08 11:59:08] + BOINC_APP=ATLAS
[2026-03-08 11:59:08] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-08 11:59:08] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-08 11:59:08] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-08 11:59:08] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-08 11:59:08] + '[' -z 1 ']'
[2026-03-08 11:59:08] + '[' 1 == 1 ']'
[2026-03-08 11:59:08] + shift
[2026-03-08 11:59:08] + export SITE_NAME=BOINC
[2026-03-08 11:59:08] + SITE_NAME=BOINC
[2026-03-08 11:59:08] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-08 11:59:08] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-08 11:59:08] + '[' -e /var/lib/boinc/var/slot12/slots/0/init_data.xml ']'
[2026-03-08 11:59:08] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot12/slots/0/init_data.xml
[2026-03-08 11:59:08] + '[' 0 -ne 0 ']'
[2026-03-08 11:59:08] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-08 11:59:08] + '[' -f /etc/os-release ']'
[2026-03-08 11:59:08] +++ cat /etc/os-release
[2026-03-08 11:59:08] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-08 11:59:08] +++ NAME='CentOS Linux'
[2026-03-08 11:59:08] +++ VERSION='7 (Core)'
[2026-03-08 11:59:08] +++ ID=centos
[2026-03-08 11:59:08] +++ ID_LIKE='rhel fedora'
[2026-03-08 11:59:08] +++ VERSION_ID=7
[2026-03-08 11:59:08] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-08 11:59:08] +++ ANSI_COLOR='0;31'
[2026-03-08 11:59:08] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-08 11:59:08] +++ HOME_URL=https://www.centos.org/
[2026-03-08 11:59:08] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-08 11:59:08] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-08 11:59:08] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-08 11:59:08] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-08 11:59:08] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-08 11:59:08] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-08 11:59:08] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-08 11:59:08] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-08 11:59:08] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-08 11:59:08] + HOME=/var/lib/boinc/var/slot12/slots/0
[2026-03-08 11:59:08] + export HOME
[2026-03-08 11:59:08] + cd /var/lib/boinc/var/slot12/slots/0
[2026-03-08 11:59:08] + '[' '!' -z '' ']'
[2026-03-08 11:59:08] + '[' -z '' ']'
[2026-03-08 11:59:08] ++ /bin/hostname -f
[2026-03-08 11:59:08] + nodename=skurut22.grid.cesnet.cz
[2026-03-08 11:59:08] + echo nodename=skurut22.grid.cesnet.cz
[2026-03-08 11:59:08] + echo Processors=2
[2026-03-08 11:59:08] + echo Nodecount=1
[2026-03-08 11:59:08] + echo Benchmark=HEPSPEC:1.0
[2026-03-08 11:59:08] + executable=./runpilot2-wrapper.sh
[2026-03-08 11:59:08] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-08 11:59:08] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-08 11:59:08] ++ head -n 1
[2026-03-08 11:59:08] ++ tr -d '\0'
[2026-03-08 11:59:08] + line1='#!/bin/bash'
[2026-03-08 11:59:08] ++ echo '#!/bin/bash'
[2026-03-08 11:59:08] ++ sed -n 's/^#! *//p'
[2026-03-08 11:59:08] + shebang=/bin/bash
[2026-03-08 11:59:08] ++ echo /bin/bash
[2026-03-08 11:59:08] ++ awk '{print $1}'
[2026-03-08 11:59:08] + interpreter=/bin/bash
[2026-03-08 11:59:08] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-08 11:59:08] + '[' x/bin/bash = x ']'
[2026-03-08 11:59:08] + type /bin/bash
[2026-03-08 11:59:08] + '[' xgnutime = xgnutime ']'
[2026-03-08 11:59:08] + /usr/bin/time -o /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-08 11:59:08] + RESULT=2
[2026-03-08 11:59:08] + sed -i -e /nodename=/d /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-08 11:59:08] ++ grep domain_name init_data.xml
[2026-03-08 11:59:08] ++ awk -F '>' '{print $2}'
[2026-03-08 11:59:08] ++ awk -F '<' '{print $1}'
[2026-03-08 11:59:08] ++ sed -e 's# #_#g'
[2026-03-08 11:59:08] + hostname=skurut22.grid.cesnet.cz
[2026-03-08 11:59:08] ++ grep user_name init_data.xml
[2026-03-08 11:59:08] ++ awk -F '>' '{print $2}'
[2026-03-08 11:59:08] ++ awk -F '<' '{print $1}'
[2026-03-08 11:59:08] ++ sed -e 's# #_#g'
[2026-03-08 11:59:08] + username=praguelcg2
[2026-03-08 11:59:08] + nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-08 11:59:08] + echo nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-08 11:59:08] + '[' -n 4 ']'
[2026-03-08 11:59:08] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-08 11:59:08] + echo exitcode=2
[2026-03-08 11:59:08] + runtimeenvironments=
[2026-03-08 11:59:08] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-08 11:59:08] + RTE_function_0 2
[2026-03-08 11:59:08] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-08 11:59:08] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-08 11:59:08] + export BOINC_APP=ATLAS
[2026-03-08 11:59:08] + BOINC_APP=ATLAS
[2026-03-08 11:59:08] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-08 11:59:08] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-08 11:59:08] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-08 11:59:08] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-08 11:59:08] + '[' -z 2 ']'
[2026-03-08 11:59:08] + '[' 2 == 1 ']'
[2026-03-08 11:59:08] + '[' 0 -ne 0 ']'
[2026-03-08 11:59:08] + echo 'zip all output files'
[2026-03-08 11:59:08] + flist='*.diag '
[2026-03-08 11:59:08] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-08 11:59:08] + '[' -e ./heartbeat.json ']'
[2026-03-08 11:59:08] + flist='*.diag  ./heartbeat.json'
[2026-03-08 11:59:08] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-08 11:59:08] + '[' -e ./output.list ']'
[2026-03-08 11:59:08] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-08 11:59:08] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-08 11:59:08] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1'
[2026-03-08 11:59:08] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-08 11:59:08] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-08 11:59:08] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1'
[2026-03-08 11:59:08] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-08 11:59:08] + '[' -e ./gmlog/ ']'
[2026-03-08 11:59:08] + '[' -f output.list ']'
[2026-03-08 11:59:08] + tar cvf result.tar.gz VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1
[2026-03-08 11:59:08] + '[' xgnutime = xcgroup ']'
[2026-03-08 11:59:08] + '[' -n '' ']'
[2026-03-08 11:59:08] + '[' -n '' ']'
[2026-03-08 11:59:08] ++ date +%s
[2026-03-08 11:59:08] + ACCOUNTING_ENDTIME=1772967548
[2026-03-08 11:59:08] ++ date -d '1970-01-01 UTC 1772967361 seconds' +%Y%m%d%H%M%SZ
[2026-03-08 11:59:08] + echo LRMSStartTime=20260308115601Z
[2026-03-08 11:59:08] ++ date -d '1970-01-01 UTC 1772967548 seconds' +%Y%m%d%H%M%SZ
[2026-03-08 11:59:08] + echo LRMSEndTime=20260308115908Z
[2026-03-08 11:59:08] + echo walltime=187
[2026-03-08 11:59:08] + echo exitcode=2
[2026-03-08 11:59:08] + exit 2
[2026-03-08 11:59:08] ./PanDA_Pilot-7032912691/PoolFileCatalog.xml
[2026-03-08 11:59:08] ./PanDA_Pilot-7032912691/log.EVNTtoHITS
[2026-03-08 11:59:08] ./PanDA_Pilot-7032912691/prmon.log
[2026-03-08 11:59:08] ./PanDA_Pilot-7032912691/pilotlog.txt
[2026-03-08 11:59:08] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-08 11:59:08] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-08 11:59:08] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-08 11:59:08] ./pilot3/pilot/util/realtimelogger.py
[2026-03-08 11:59:08] ./pilot3/pilot/util/loggingsupport.py
[2026-03-08 11:59:08] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-08 11:59:08] ./runtime_log.err
[2026-03-08 11:59:08] ./log.48843205._000027.job.log.1
[2026-03-08 11:59:08] ./pilotlog.txt
[2026-03-08 11:59:08] ./runtime_log
15:03:16 (2763991): wrapper (7.7.26015): starting
15:03:16 (2763991): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 15:03:16] Arguments: --nthreads 4
[2026-03-09 15:03:16] Threads: 4
[2026-03-09 15:03:16] This job has been restarted, cleaning up previous attempt
[2026-03-09 15:03:17] Checking for CVMFS
[2026-03-09 15:03:17] No cvmfs_config command found, will try listing directly
[2026-03-09 15:03:17] CVMFS is ok
[2026-03-09 15:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 15:03:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 15:03:17] Further information can be found at the LHC@home message board.
[2026-03-09 15:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 15:03:17] Checking for apptainer binary...
[2026-03-09 15:03:17] which: no apptainer in ((null))
[2026-03-09 15:03:17] apptainer is not installed, using version from CVMFS
[2026-03-09 15:03:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 15:03:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-09 15:03:17] apptainer works
[2026-03-09 15:03:17] Set ATHENA_PROC_NUMBER=4
[2026-03-09 15:03:17] Set ATHENA_CORE_NUMBER=4
[2026-03-09 15:03:17] Starting ATLAS job with PandaID=7032912691
[2026-03-09 15:03:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 15:06:52] Job failed
[2026-03-09 15:06:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-03-09 15:06:52] ++ pwd
[2026-03-09 15:06:52] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-09 15:06:52] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot12/slots/0/
[2026-03-09 15:06:52] + mv ATLAS.root_0 EVNT.48447555._000002.pool.root.1
[2026-03-09 15:06:52] mv: 'ATLAS.root_0' and 'EVNT.48447555._000002.pool.root.1' are the same file
[2026-03-09 15:06:52] + tar --strip-components=5 -xvf input.tar.gz
[2026-03-09 15:06:52] + umask 077
[2026-03-09 15:06:52] ++ date +%s
[2026-03-09 15:06:52] + ACCOUNTING_STARTTIME=1773064998
[2026-03-09 15:06:52] + echo 'Detecting resource accounting method available for the job.'
[2026-03-09 15:06:52] Detecting resource accounting method available for the job.
[2026-03-09 15:06:52] + JOB_ACCOUNTING=
[2026-03-09 15:06:52] + command -v arc-job-cgroup
[2026-03-09 15:06:52] + '[' -z '' ']'
[2026-03-09 15:06:52] + GNU_TIME=/usr/bin/time
[2026-03-09 15:06:52] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-03-09 15:06:52] Looking for /usr/bin/time tool for accounting measurements
[2026-03-09 15:06:52] + '[' '!' -z /usr/bin/time ']'
[2026-03-09 15:06:52] + /usr/bin/time --version
[2026-03-09 15:06:52] + echo 'GNU time found and will be used for job accounting.'
[2026-03-09 15:06:52] GNU time found and will be used for job accounting.
[2026-03-09 15:06:52] + JOB_ACCOUNTING=gnutime
[2026-03-09 15:06:52] + '[' -z gnutime ']'
[2026-03-09 15:06:52] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-09 15:06:52] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-03-09 15:06:52] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-09 15:06:52] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-02-28/BOINC_MCORE/7032912691.out
[2026-03-09 15:06:52] + export PILOT_NOKILL=YES
[2026-03-09 15:06:52] + PILOT_NOKILL=YES
[2026-03-09 15:06:52] + export GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-09 15:06:52] + GRID_GLOBAL_JOBID=VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-09 15:06:52] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-09 15:06:52] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm
[2026-03-09 15:06:52] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-09 15:06:52] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-03-09 15:06:52] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-09 15:06:52] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2026-03-09 15:06:52] ++ pwd
[2026-03-09 15:06:52] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot12/slots/0
[2026-03-09 15:06:52] + RUNTIME_JOB_STDIN=/dev/null
[2026-03-09 15:06:52] ++ pwd
[2026-03-09 15:06:52] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-09 15:06:52] ++ pwd
[2026-03-09 15:06:52] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot12/slots/0/log.48843205._000027.job.log.1
[2026-03-09 15:06:52] ++ pwd
[2026-03-09 15:06:52] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0.diag
[2026-03-09 15:06:52] + '[' '!' -z '' ']'
[2026-03-09 15:06:52] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-03-09 15:06:52] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-03-09 15:06:52] + RUNTIME_FRONTEND_SEES_NODE=
[2026-03-09 15:06:52] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-03-09 15:06:52] + '[' '!' -z '' ']'
[2026-03-09 15:06:52] + '[' -z yes ']'
[2026-03-09 15:06:52] ++ pwd
[2026-03-09 15:06:52] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-09 15:06:52] + runtimeenvironments=
[2026-03-09 15:06:52] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-09 15:06:52] + RTE_function_0 1
[2026-03-09 15:06:52] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-09 15:06:52] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-09 15:06:52] + export BOINC_APP=ATLAS
[2026-03-09 15:06:52] + BOINC_APP=ATLAS
[2026-03-09 15:06:52] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-09 15:06:52] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-09 15:06:52] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-09 15:06:52] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-09 15:06:52] + '[' -z 1 ']'
[2026-03-09 15:06:52] + '[' 1 == 1 ']'
[2026-03-09 15:06:52] + shift
[2026-03-09 15:06:52] + export SITE_NAME=BOINC
[2026-03-09 15:06:52] + SITE_NAME=BOINC
[2026-03-09 15:06:52] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-09 15:06:52] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot12/slots/0/
[2026-03-09 15:06:52] + '[' -e /var/lib/boinc/var/slot12/slots/0/init_data.xml ']'
[2026-03-09 15:06:52] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot12/slots/0/init_data.xml
[2026-03-09 15:06:52] + '[' 0 -ne 0 ']'
[2026-03-09 15:06:52] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-03-09 15:06:52] + '[' -f /etc/os-release ']'
[2026-03-09 15:06:52] +++ cat /etc/os-release
[2026-03-09 15:06:52] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-03-09 15:06:52] +++ NAME='CentOS Linux'
[2026-03-09 15:06:52] +++ VERSION='7 (Core)'
[2026-03-09 15:06:52] +++ ID=centos
[2026-03-09 15:06:52] +++ ID_LIKE='rhel fedora'
[2026-03-09 15:06:52] +++ VERSION_ID=7
[2026-03-09 15:06:52] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-03-09 15:06:52] +++ ANSI_COLOR='0;31'
[2026-03-09 15:06:52] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-03-09 15:06:52] +++ HOME_URL=https://www.centos.org/
[2026-03-09 15:06:52] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-03-09 15:06:52] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-03-09 15:06:52] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-03-09 15:06:52] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-03-09 15:06:52] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-03-09 15:06:52] ++ echo 'CentOS Linux 7 (Core)'
[2026-03-09 15:06:52] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-03-09 15:06:52] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-03-09 15:06:52] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-03-09 15:06:52] + HOME=/var/lib/boinc/var/slot12/slots/0
[2026-03-09 15:06:52] + export HOME
[2026-03-09 15:06:52] + cd /var/lib/boinc/var/slot12/slots/0
[2026-03-09 15:06:52] + '[' '!' -z '' ']'
[2026-03-09 15:06:52] + '[' -z '' ']'
[2026-03-09 15:06:52] ++ /bin/hostname -f
[2026-03-09 15:06:52] + nodename=skurut22.grid.cesnet.cz
[2026-03-09 15:06:52] + echo nodename=skurut22.grid.cesnet.cz
[2026-03-09 15:06:52] + echo Processors=2
[2026-03-09 15:06:52] + echo Nodecount=1
[2026-03-09 15:06:52] + echo Benchmark=HEPSPEC:1.0
[2026-03-09 15:06:52] + executable=./runpilot2-wrapper.sh
[2026-03-09 15:06:52] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-03-09 15:06:52] ++ tr -d '\0'
[2026-03-09 15:06:52] ++ head -n 1
[2026-03-09 15:06:52] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-03-09 15:06:52] + line1='#!/bin/bash'
[2026-03-09 15:06:52] ++ echo '#!/bin/bash'
[2026-03-09 15:06:52] ++ sed -n 's/^#! *//p'
[2026-03-09 15:06:52] + shebang=/bin/bash
[2026-03-09 15:06:52] ++ echo /bin/bash
[2026-03-09 15:06:52] ++ awk '{print $1}'
[2026-03-09 15:06:52] + interpreter=/bin/bash
[2026-03-09 15:06:52] + '[' /bin/bash = /usr/bin/env ']'
[2026-03-09 15:06:52] + '[' x/bin/bash = x ']'
[2026-03-09 15:06:52] + type /bin/bash
[2026-03-09 15:06:52] + '[' xgnutime = xgnutime ']'
[2026-03-09 15:06:52] + /usr/bin/time -o /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.11.4.1 -z -t --piloturl local --mute --container
[2026-03-09 15:06:52] + RESULT=2
[2026-03-09 15:06:52] + sed -i -e /nodename=/d /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-09 15:06:52] ++ grep domain_name init_data.xml
[2026-03-09 15:06:52] ++ awk -F '>' '{print $2}'
[2026-03-09 15:06:52] ++ sed -e 's# #_#g'
[2026-03-09 15:06:52] ++ awk -F '<' '{print $1}'
[2026-03-09 15:06:52] + hostname=skurut22.grid.cesnet.cz
[2026-03-09 15:06:52] ++ grep user_name init_data.xml
[2026-03-09 15:06:52] ++ awk -F '>' '{print $2}'
[2026-03-09 15:06:52] ++ sed -e 's# #_#g'
[2026-03-09 15:06:52] ++ awk -F '<' '{print $1}'
[2026-03-09 15:06:52] + username=praguelcg2
[2026-03-09 15:06:52] + nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-09 15:06:52] + echo nodename=praguelcg2@skurut22.grid.cesnet.cz
[2026-03-09 15:06:52] + '[' -n 4 ']'
[2026-03-09 15:06:52] + sed -i -e s/Processors=1/Processors=4/ /var/lib/boinc/var/slot12/slots/0/VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag
[2026-03-09 15:06:52] + echo exitcode=2
[2026-03-09 15:06:52] + runtimeenvironments=
[2026-03-09 15:06:52] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-03-09 15:06:52] + RTE_function_0 2
[2026-03-09 15:06:52] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-09 15:06:52] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-03-09 15:06:52] + export BOINC_APP=ATLAS
[2026-03-09 15:06:52] + BOINC_APP=ATLAS
[2026-03-09 15:06:52] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-09 15:06:52] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-03-09 15:06:52] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-09 15:06:52] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-03-09 15:06:52] + '[' -z 2 ']'
[2026-03-09 15:06:52] + '[' 2 == 1 ']'
[2026-03-09 15:06:52] + '[' 0 -ne 0 ']'
[2026-03-09 15:06:52] + echo 'zip all output files'
[2026-03-09 15:06:52] + flist='*.diag '
[2026-03-09 15:06:52] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-09 15:06:52] + '[' -e ./heartbeat.json ']'
[2026-03-09 15:06:52] + flist='*.diag  ./heartbeat.json'
[2026-03-09 15:06:52] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-09 15:06:52] + '[' -e ./output.list ']'
[2026-03-09 15:06:52] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-09 15:06:52] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-09 15:06:52] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1'
[2026-03-09 15:06:52] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-09 15:06:52] + '[' -e ./log.48843205._000027.job.log.1 ']'
[2026-03-09 15:06:52] + flist='*.diag  ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1'
[2026-03-09 15:06:52] + for f in ./heartbeat.json ./output.list ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1 ./gmlog/
[2026-03-09 15:06:52] + '[' -e ./gmlog/ ']'
[2026-03-09 15:06:52] + '[' -f output.list ']'
[2026-03-09 15:06:52] + tar cvf result.tar.gz VyXLDmSeUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmK44KDmFaf1pm.diag ./heartbeat.json ./log.48843205._000027.job.log.1 ./log.48843205._000027.job.log.1
[2026-03-09 15:06:52] + '[' xgnutime = xcgroup ']'
[2026-03-09 15:06:52] + '[' -n '' ']'
[2026-03-09 15:06:52] + '[' -n '' ']'
[2026-03-09 15:06:52] ++ date +%s
[2026-03-09 15:06:52] + ACCOUNTING_ENDTIME=1773065212
[2026-03-09 15:06:52] ++ date -d '1970-01-01 UTC 1773064998 seconds' +%Y%m%d%H%M%SZ
[2026-03-09 15:06:52] + echo LRMSStartTime=20260309150318Z
[2026-03-09 15:06:52] ++ date -d '1970-01-01 UTC 1773065212 seconds' +%Y%m%d%H%M%SZ
[2026-03-09 15:06:52] + echo LRMSEndTime=20260309150652Z
[2026-03-09 15:06:52] + echo walltime=214
[2026-03-09 15:06:52] + echo exitcode=2
[2026-03-09 15:06:52] + exit 2
[2026-03-09 15:06:52] ./PanDA_Pilot-7032912691/PoolFileCatalog.xml
[2026-03-09 15:06:52] ./PanDA_Pilot-7032912691/log.EVNTtoHITS
[2026-03-09 15:06:52] ./PanDA_Pilot-7032912691/prmon.log
[2026-03-09 15:06:52] ./PanDA_Pilot-7032912691/pilotlog.txt
[2026-03-09 15:06:52] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-03-09 15:06:52] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-03-09 15:06:52] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-03-09 15:06:52] ./pilot3/pilot/util/realtimelogger.py
[2026-03-09 15:06:52] ./pilot3/pilot/util/loggingsupport.py
[2026-03-09 15:06:52] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-03-09 15:06:52] ./runtime_log.err
[2026-03-09 15:06:52] ./log.48843205._000027.job.log.1
[2026-03-09 15:06:52] ./pilotlog.txt
[2026-03-09 15:06:52] ./runtime_log
15:16:53 (2763991): run_atlas exited; CPU time 13.697245
15:16:53 (2763991): app exit status: 0x1
15:16:53 (2763991): called boinc_finish(195)

</stderr_txt>
]]>

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