Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:11:58 (3472380): wrapper (7.7.26015): starting
08:11:58 (3472380): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 08:11:58] Arguments: --nthreads 4
[2026-03-03 08:11:58] Threads: 4
[2026-03-03 08:11:58] Checking for CVMFS
[2026-03-03 08:11:58] No cvmfs_config command found, will try listing directly
[2026-03-03 08:11:58] CVMFS is ok
[2026-03-03 08:11:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 08:11:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 08:11:58] Further information can be found at the LHC@home message board.
[2026-03-03 08:11:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 08:11:58] Checking for apptainer binary...
[2026-03-03 08:11:58] which: no apptainer in ((null))
[2026-03-03 08:11:58] apptainer is not installed, using version from CVMFS
[2026-03-03 08:11:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 08:11:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-03 08:11:58] apptainer works
[2026-03-03 08:11:58] Set ATHENA_PROC_NUMBER=4
[2026-03-03 08:11:58] Set ATHENA_CORE_NUMBER=4
[2026-03-03 08:11:58] Starting ATLAS job with PandaID=7032912443
[2026-03-03 08:11:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 11:25:20]  *** The last 200 lines of the pilot log: ***
[2026-03-03 11:25:20] 2026-03-03 10:05:05,560 | INFO     | log transfer has been attempted: DONE
[2026-03-03 11:25:20] 2026-03-03 10:05:05,560 | INFO     | job 7032912443 has finished - writing final server update
[2026-03-03 11:25:20] 2026-03-03 10:05:05,561 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2965417/.job.ad'
[2026-03-03 11:25:20] 2026-03-03 10:05:05,561 | INFO     | total number of processed events: 400 (read)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,585 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-7032912443/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,585 | INFO     | extracted standard info from prmon json
[2026-03-03 11:25:20] 2026-03-03 10:05:05,586 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 11:25:20] 2026-03-03 10:05:05,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 11:25:20] 2026-03-03 10:05:05,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 11:25:20] 2026-03-03 10:05:05,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 11:25:20] 2026-03-03 10:05:05,589 | INFO     | fitting pss+swap vs Time
[2026-03-03 11:25:20] 2026-03-03 10:05:05,590 | INFO     | sum of square deviations: 1523386702.5
[2026-03-03 11:25:20] 2026-03-03 10:05:05,591 | INFO     | sum of deviations: -3537624209.5
[2026-03-03 11:25:20] 2026-03-03 10:05:05,591 | INFO     | mean x: 1772527123.5
[2026-03-03 11:25:20] 2026-03-03 10:05:05,591 | INFO     | mean y: 2337368.064705882
[2026-03-03 11:25:20] 2026-03-03 10:05:05,591 | INFO     | intersect: 4118518015.9583397
[2026-03-03 11:25:20] 2026-03-03 10:05:05,592 | INFO     | chi2: 2.0308910394105375
[2026-03-03 11:25:20] 2026-03-03 10:05:05,592 | INFO     | sum of square deviations: 1392881930.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,593 | INFO     | sum of deviations: 7277681493.999993
[2026-03-03 11:25:20] 2026-03-03 10:05:05,593 | INFO     | mean x: 1772526971.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,593 | INFO     | mean y: 2349706.224242424
[2026-03-03 11:25:20] 2026-03-03 10:05:05,593 | INFO     | intersect: -9258942623.458405
[2026-03-03 11:25:20] 2026-03-03 10:05:05,593 | INFO     | chi2: 1.223014352686082
[2026-03-03 11:25:20] 2026-03-03 10:05:05,594 | INFO     | current chi2=1.223014352686082 (change=39.77942051282773 %)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,594 | INFO     | sum of square deviations: 1270051720.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,595 | INFO     | sum of deviations: 7122847237.5
[2026-03-03 11:25:20] 2026-03-03 10:05:05,595 | INFO     | mean x: 1772526818.5
[2026-03-03 11:25:20] 2026-03-03 10:05:05,595 | INFO     | mean y: 2349513.96875
[2026-03-03 11:25:20] 2026-03-03 10:05:05,595 | INFO     | intersect: -9938535218.30608
[2026-03-03 11:25:20] 2026-03-03 10:05:05,595 | INFO     | chi2: 1.2238729270488746
[2026-03-03 11:25:20] 2026-03-03 10:05:05,596 | INFO     | current chi2=1.2238729270488746 (change=-0.07020149525694575 %)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,596 | INFO     | right removable region: 159
[2026-03-03 11:25:20] 2026-03-03 10:05:05,596 | INFO     | sum of square deviations: 1392881930.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,597 | INFO     | sum of deviations: -20833632011.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,597 | INFO     | mean x: 1772527276.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,597 | INFO     | mean y: 2357206.3515151516
[2026-03-03 11:25:20] 2026-03-03 10:05:05,597 | INFO     | intersect: 26514425603.738388
[2026-03-03 11:25:20] 2026-03-03 10:05:05,598 | INFO     | chi2: 0.8602370913110398
[2026-03-03 11:25:20] 2026-03-03 10:05:05,598 | INFO     | current chi2=0.8602370913110398 (change=57.64238087530673 %)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,598 | INFO     | sum of square deviations: 1270051720.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,599 | INFO     | sum of deviations: -21545426127.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,599 | INFO     | mean x: 1772527428.5
[2026-03-03 11:25:20] 2026-03-03 10:05:05,599 | INFO     | mean y: 2358051.4625
[2026-03-03 11:25:20] 2026-03-03 10:05:05,599 | INFO     | intersect: 30071888423.680748
[2026-03-03 11:25:20] 2026-03-03 10:05:05,600 | INFO     | chi2: 0.8472397130459433
[2026-03-03 11:25:20] 2026-03-03 10:05:05,600 | INFO     | current chi2=0.8472397130459433 (change=1.5109065159336386 %)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,600 | INFO     | left removable region: 20
[2026-03-03 11:25:20] 2026-03-03 10:05:05,600 | INFO     | sum of square deviations: 832722590.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,601 | INFO     | sum of deviations: -8370934230.000001
[2026-03-03 11:25:20] 2026-03-03 10:05:05,601 | INFO     | mean x: 1772527398.0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,601 | INFO     | mean y: 2369267.6043165466
[2026-03-03 11:25:20] 2026-03-03 10:05:05,601 | INFO     | intersect: 17820680488.789078
[2026-03-03 11:25:20] 2026-03-03 10:05:05,601 | INFO     | chi2: 0.014496926088273928
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | current memory leak: -10.05 B/s (using 139 data points, chi2=0.01)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | could have reported an average CPU frequency of 2734 MHz (9 samples)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | ..............................
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | . Timing measurements:
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | . get job = 0 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | . initial setup = 8 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | . payload setup = 9 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | . stage-in = 0 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,602 | INFO     | . payload execution = 10336 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,603 | INFO     | . stage-out = 0 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,603 | INFO     | . log creation = 0 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,603 | INFO     | ..............................
[2026-03-03 11:25:20] 2026-03-03 10:05:05,691 | INFO     | 
[2026-03-03 11:25:20] 2026-03-03 10:05:05,691 | INFO     | job summary report
[2026-03-03 11:25:20] 2026-03-03 10:05:05,691 | INFO     | --------------------------------------------------
[2026-03-03 11:25:20] 2026-03-03 10:05:05,691 | INFO     | PanDA job id: 7032912443
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | task id: 48838476
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | errors: (none)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | pilot state: finished 
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | transexitcode: 0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | exeerrorcode: 0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | exeerrordiag: 
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | exitcode: 0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | exitmsg: OK
[2026-03-03 11:25:20] 2026-03-03 10:05:05,692 | INFO     | cpuconsumptiontime: 39515 s
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | nevents: 400
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | neventsw: 0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | pid: 3481789
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | pgrp: 3481789
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | corecount: 4
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | event service: False
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | sizes: {0: 2281156, 1: 2282285, 12: 2282285, 10348: 2311530, 10350: 2320550, 10352: 2320992}
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | --------------------------------------------------
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | 
[2026-03-03 11:25:20] 2026-03-03 10:05:05,693 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2026-03-03 11:25:20] 2026-03-03 10:05:05,727 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,727 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,727 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 11:25:20] 2026-03-03 10:05:05,729 | INFO     | job 7032912443 has completed (purged errors)
[2026-03-03 11:25:20] 2026-03-03 10:05:05,730 | INFO     | overall cleanup function is called
[2026-03-03 11:25:20] 2026-03-03 10:05:06,739 | INFO     | --- collectZombieJob: --- 10, [3481789]
[2026-03-03 11:25:20] 2026-03-03 10:05:06,740 | INFO     | zombie collector waiting for pid 3481789
[2026-03-03 11:25:20] 2026-03-03 10:05:06,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 11:25:20] 2026-03-03 10:05:06,740 | INFO     | collected zombie processes
[2026-03-03 11:25:20] 2026-03-03 10:05:06,740 | INFO     | will attempt to kill all subprocesses of pid=3481789
[2026-03-03 11:25:20] 2026-03-03 10:05:07,529 | INFO     | process IDs to be killed: [3481789] (in reverse order)
[2026-03-03 11:25:20] 2026-03-03 10:05:07,816 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 11:25:20] 2026-03-03 10:05:07,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 11:25:20] 2026-03-03 10:05:07,844 | INFO     | did not find any defunct processes belonging to 3481789
[2026-03-03 11:25:20] 2026-03-03 10:05:07,870 | INFO     | did not find any defunct processes belonging to 3481789
[2026-03-03 11:25:20] 2026-03-03 10:05:07,871 | INFO     | ready for new job
[2026-03-03 11:25:20] 2026-03-03 10:05:07,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 11:25:20] 2026-03-03 10:05:07,874 | INFO     | **************************************
[2026-03-03 11:25:20] 2026-03-03 10:05:07,874 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 11:25:20] 2026-03-03 10:05:07,874 | INFO     | **************************************
[2026-03-03 11:25:20] 2026-03-03 10:05:07,874 | INFO     | 
[2026-03-03 11:25:20] 2026-03-03 10:05:07,883 | INFO     | architecture information:
[2026-03-03 11:25:20] 2026-03-03 10:05:07,883 | INFO     | executing command: cat /etc/os-release
[2026-03-03 11:25:20] 2026-03-03 10:05:07,903 | INFO     | cat /etc/os-release:
[2026-03-03 11:25:20] NAME="CentOS Linux"
[2026-03-03 11:25:20] VERSION="7 (Core)"
[2026-03-03 11:25:20] ID="centos"
[2026-03-03 11:25:20] ID_LIKE="rhel fedora"
[2026-03-03 11:25:20] VERSION_ID="7"
[2026-03-03 11:25:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 11:25:20] ANSI_COLOR="0;31"
[2026-03-03 11:25:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 11:25:20] HOME_URL="https://www.centos.org/"
[2026-03-03 11:25:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 11:25:20] 
[2026-03-03 11:25:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 11:25:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 11:25:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 11:25:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 11:25:20] 
[2026-03-03 11:25:20] 2026-03-03 10:05:07,904 | INFO     | **************************************
[2026-03-03 11:25:20] 2026-03-03 10:05:08,406 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2026-03-03 11:25:20] 2026-03-03 10:05:08,427 | INFO     | sufficient remaining disk space (3325600727040 B)
[2026-03-03 11:25:20] 2026-03-03 10:05:08,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 11:25:20] 2026-03-03 10:05:08,428 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 11:25:20] 2026-03-03 10:05:08,428 | INFO     | update_server=False
[2026-03-03 11:25:20] 2026-03-03 10:05:08,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 11:25:20] 2026-03-03 10:05:08,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:25:20] 2026-03-03 10:05:08,429 | INFO     | aborting loop
[2026-03-03 11:25:20] 2026-03-03 10:05:08,546 | INFO     | all job control threads have been joined
[2026-03-03 11:25:20] 2026-03-03 10:05:08,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 11:25:20] 2026-03-03 10:05:09,191 | INFO     | all data control threads have been joined
[2026-03-03 11:25:20] 2026-03-03 10:05:09,233 | INFO     | all payload control threads have been joined
[2026-03-03 11:25:20] 2026-03-03 10:05:09,432 | INFO     | [job] retrieve thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:09,432 | INFO     | [job] job monitor thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:09,470 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:09,551 | INFO     | [job] control thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:09,896 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:09,985 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,196 | INFO     | [data] control thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,239 | INFO     | [payload] control thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,318 | INFO     | [data] copytool_in thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,358 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,500 | INFO     | [job] validate thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,587 | INFO     | [payload] validate_post thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:25:20] 2026-03-03 10:05:10,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 11:25:20] 2026-03-03 10:05:10,910 | INFO     | [payload] failed_post thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:10,942 | INFO     | [data] copytool_out thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:11,705 | INFO     | [job] queue monitor thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:14,743 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 11:25:20] 2026-03-03 10:05:37,546 | INFO     | [monitor] cgroup control has ended
[2026-03-03 11:25:20] 2026-03-03 10:05:38,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22731312043840)>', '<ExcThread(monitor, started 22731073795840)>']
[2026-03-03 11:25:20] 2026-03-03 10:05:39,449 | INFO     | PID=3476752 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 11:25:20] 2026-03-03 10:05:39,449 | INFO     | .. there are 18 such processes running
[2026-03-03 11:25:20] 2026-03-03 10:05:39,450 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 11:25:20] 2026-03-03 10:05:39,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 11:25:20] 2026-03-03 10:05:39,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 11:25:20] 2026-03-03 10:05:39,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 11:25:20] 2026-03-03 10:05:39,450 | INFO     | [monitor] control thread has ended
[2026-03-03 11:25:20] 2026-03-03 10:05:43,276 | INFO     | all workflow threads have been joined
[2026-03-03 11:25:20] 2026-03-03 10:05:43,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 11:25:20] 2026-03-03 10:05:43,277 | INFO     | traces error code: 0
[2026-03-03 11:25:20] 2026-03-03 10:05:43,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 11:25:20] 2026-03-03 10:05:43,464 [wrapper] ==== pilot stdout END ====
[2026-03-03 11:25:20] 2026-03-03 10:05:43,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 11:25:20] 2026-03-03 10:05:43,473 [wrapper] pilotpid: 3476752
[2026-03-03 11:25:20] 2026-03-03 10:05:43,477 [wrapper] Pilot exit status: 0
[2026-03-03 11:25:20] 2026-03-03 10:05:43,493 [wrapper] pandaids: 7032912443
[2026-03-03 11:25:20] 2026-03-03 10:05:43,687 [wrapper] cleanup supervisor_pilot 3741638 3476753
[2026-03-03 11:25:20] 2026-03-03 10:05:43,691 [wrapper] Test setup, not cleaning
[2026-03-03 11:25:20] 2026-03-03 10:05:43,695 [wrapper] apfmon messages muted
[2026-03-03 11:25:20] 2026-03-03 10:05:43,699 [wrapper] ==== wrapper stdout END ====
[2026-03-03 11:25:20] 2026-03-03 10:05:43,703 [wrapper] ==== wrapper stderr END ====
[2026-03-03 11:25:20]  *** Error codes and diagnostics ***
[2026-03-03 11:25:20]     "exeErrorCode": 0,
[2026-03-03 11:25:20]     "exeErrorDiag": "",
[2026-03-03 11:25:20]     "pilotErrorCode": 0,
[2026-03-03 11:25:20]     "pilotErrorDiag": "",
[2026-03-03 11:25:20]  *** Listing of results directory ***
[2026-03-03 11:25:20] total 479628
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc    584627 Feb 28 09:11 pilot3.tar.gz
[2026-03-03 11:25:20] -rwx------ 1 boinc boinc     36322 Feb 28 09:14 runpilot2-wrapper.sh
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc      5111 Feb 28 09:16 queuedata.json
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc       100 Mar  3 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 11:25:20] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 08:11 run_atlas
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc       105 Mar  3 08:11 job.xml
[2026-03-03 11:25:20] -rw-r--r-- 2 boinc boinc 277212292 Mar  3 08:11 EVNT.48220149._000032.pool.root.1
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc      6699 Mar  3 08:11 init_data.xml
[2026-03-03 11:25:20] -rw-r--r-- 2 boinc boinc     15845 Mar  3 08:11 start_atlas.sh
[2026-03-03 11:25:20] drwxrwx--x 2 boinc boinc      4096 Mar  3 08:11 shared
[2026-03-03 11:25:20] -rw-r--r-- 2 boinc boinc    597987 Mar  3 08:11 input.tar.gz
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc         0 Mar  3 08:11 boinc_lockfile
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc      2587 Mar  3 08:11 pandaJob.out
[2026-03-03 11:25:20] -rw------- 1 boinc boinc    998412 Mar  3 08:12 agis_schedconf.cvmfs.json
[2026-03-03 11:25:20] -rw------- 1 boinc boinc   1512931 Mar  3 08:12 agis_ddmendpoints.agis.ALL.json
[2026-03-03 11:25:20] -rw------- 1 boinc boinc       443 Mar  3 08:12 workernode_map.json
[2026-03-03 11:25:20] drwx------ 5 boinc boinc      4096 Mar  3 08:12 pilot3
[2026-03-03 11:25:20] -rw------- 1 boinc boinc 206395750 Mar  3 11:04 HITS.48838476._000808.pool.root.1
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc       528 Mar  3 11:04 boinc_task_state.xml
[2026-03-03 11:25:20] -rw------- 1 boinc boinc      1025 Mar  3 11:04 memory_monitor_summary.json
[2026-03-03 11:25:20] -rw------- 1 boinc boinc    346822 Mar  3 11:05 log.48838476._000808.job.log.tgz.1
[2026-03-03 11:25:20] -rw------- 1 boinc boinc      6350 Mar  3 11:05 heartbeat.json
[2026-03-03 11:25:20] -rw------- 1 boinc boinc        95 Mar  3 11:05 pilot_heartbeat.json
[2026-03-03 11:25:20] -rw------- 1 boinc boinc      4831 Mar  3 11:05 pilotlog.txt
[2026-03-03 11:25:20] -rw------- 1 boinc boinc   1453755 Mar  3 11:05 log.48838476._000808.job.log.1
[2026-03-03 11:25:20] -rw------- 1 boinc boinc       357 Mar  3 11:05 output.list
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc       620 Mar  3 11:05 runtime_log
[2026-03-03 11:25:20] -rw------- 1 boinc boinc   1822720 Mar  3 11:05 result.tar.gz
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc      9205 Mar  3 11:05 runtime_log.err
[2026-03-03 11:25:20] -rw------- 1 boinc boinc       665 Mar  3 11:05 9kqKDmMeUG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8k6KDmCVVeYm.diag
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc        26 Mar  3 11:25 wrapper_checkpoint.txt
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc      8192 Mar  3 11:25 boinc_mmap_file
[2026-03-03 11:25:20] -rw-r--r-- 1 boinc boinc     20864 Mar  3 11:25 stderr.txt
[2026-03-03 11:25:20] HITS file was successfully produced:
[2026-03-03 11:25:20] -rw------- 1 boinc boinc 206395750 Mar  3 11:04 shared/HITS.pool.root.1
[2026-03-03 11:25:20]  *** Contents of shared directory: ***
[2026-03-03 11:25:20] total 474664
[2026-03-03 11:25:20] -rw-r--r-- 2 boinc boinc 277212292 Mar  3 08:11 ATLAS.root_0
[2026-03-03 11:25:20] -rw-r--r-- 2 boinc boinc     15845 Mar  3 08:11 start_atlas.sh
[2026-03-03 11:25:20] -rw-r--r-- 2 boinc boinc    597987 Mar  3 08:11 input.tar.gz
[2026-03-03 11:25:20] -rw------- 1 boinc boinc 206395750 Mar  3 11:04 HITS.pool.root.1
[2026-03-03 11:25:20] -rw------- 1 boinc boinc   1822720 Mar  3 11:05 result.tar.gz
11:25:21 (3472380): run_atlas exited; CPU time 40123.775464
11:25:21 (3472380): called boinc_finish(0)

</stderr_txt>
]]>

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