Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:18 (1913849): wrapper (7.7.26015): starting
09:43:18 (1913849): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 09:43:18] Arguments: --nthreads 4
[2026-03-03 09:43:18] Threads: 4
[2026-03-03 09:43:18] Checking for CVMFS
[2026-03-03 09:43:18] No cvmfs_config command found, will try listing directly
[2026-03-03 09:43:18] CVMFS is ok
[2026-03-03 09:43:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 09:43:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 09:43:18] Further information can be found at the LHC@home message board.
[2026-03-03 09:43:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 09:43:18] Checking for apptainer binary...
[2026-03-03 09:43:18] which: no apptainer in ((null))
[2026-03-03 09:43:18] apptainer is not installed, using version from CVMFS
[2026-03-03 09:43:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 09:43:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-03 09:43:18] apptainer works
[2026-03-03 09:43:19] Set ATHENA_PROC_NUMBER=4
[2026-03-03 09:43:19] Set ATHENA_CORE_NUMBER=4
[2026-03-03 09:43:19] Starting ATLAS job with PandaID=7032742598
[2026-03-03 09:43:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 12:58:07]  *** The last 200 lines of the pilot log: ***
[2026-03-03 12:58:07] 2026-03-03 11:57:15,147 | INFO     | preparing for final server update for job 7032742598 in state='finished'
[2026-03-03 12:58:07] 2026-03-03 11:57:15,147 | INFO     | reading metadata from: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7032742598/jobReport.json
[2026-03-03 12:58:07] 2026-03-03 11:57:15,150 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot56/slots/0/workernode_map.json
[2026-03-03 12:58:07] 2026-03-03 11:57:15,151 | INFO     | this job has now completed (state=finished)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,151 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,151 | INFO     | log transfer has been attempted: DONE
[2026-03-03 12:58:07] 2026-03-03 11:57:15,151 | INFO     | job 7032742598 has finished - writing final server update
[2026-03-03 12:58:07] 2026-03-03 11:57:15,151 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1103451/.job.ad'
[2026-03-03 12:58:07] 2026-03-03 11:57:15,151 | INFO     | total number of processed events: 400 (read)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,157 | INFO     | monitor loop #790: job 0:7032742598 is in state 'finished'
[2026-03-03 12:58:07] 2026-03-03 11:57:15,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,178 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7032742598/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,179 | INFO     | extracted standard info from prmon json
[2026-03-03 12:58:07] 2026-03-03 11:57:15,179 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 12:58:07] 2026-03-03 11:57:15,179 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 12:58:07] 2026-03-03 11:57:15,179 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 12:58:07] 2026-03-03 11:57:15,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 12:58:07] 2026-03-03 11:57:15,183 | INFO     | fitting pss+swap vs Time
[2026-03-03 12:58:07] 2026-03-03 11:57:15,183 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 12:58:07] 2026-03-03 11:57:15,185 | INFO     | sum of deviations: 24452800380.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,185 | INFO     | mean x: 1772533214.5
[2026-03-03 12:58:07] 2026-03-03 11:57:15,185 | INFO     | mean y: 2324671.6315789474
[2026-03-03 12:58:07] 2026-03-03 11:57:15,185 | INFO     | intersect: -20377281543.569023
[2026-03-03 12:58:07] 2026-03-03 11:57:15,185 | INFO     | chi2: 1.3225160094863186
[2026-03-03 12:58:07] 2026-03-03 11:57:15,186 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,187 | INFO     | sum of deviations: 23715308001.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,187 | INFO     | mean x: 1772533062.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,187 | INFO     | mean y: 2323983.7297297297
[2026-03-03 12:58:07] 2026-03-03 11:57:15,187 | INFO     | intersect: -21408934495.250008
[2026-03-03 12:58:07] 2026-03-03 11:57:15,187 | INFO     | chi2: 1.32330265992996
[2026-03-03 12:58:07] 2026-03-03 11:57:15,188 | INFO     | current chi2=1.32330265992996 (change=-0.05948135508370068 %)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,188 | INFO     | right removable region: 184
[2026-03-03 12:58:07] 2026-03-03 11:57:15,188 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,189 | INFO     | sum of deviations: 491108254.99999994
[2026-03-03 12:58:07] 2026-03-03 11:57:15,189 | INFO     | mean x: 1772533367.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,189 | INFO     | mean y: 2346703.4702702705
[2026-03-03 12:58:07] 2026-03-03 11:57:15,189 | INFO     | intersect: -441048237.80066067
[2026-03-03 12:58:07] 2026-03-03 11:57:15,190 | INFO     | chi2: 0.0030520176022264143
[2026-03-03 12:58:07] 2026-03-03 11:57:15,190 | INFO     | current chi2=0.0030520176022264143 (change=99.76922641538292 %)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,190 | INFO     | sum of square deviations: 1808350185.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,191 | INFO     | sum of deviations: 124503866.99999994
[2026-03-03 12:58:07] 2026-03-03 11:57:15,191 | INFO     | mean x: 1772533519.5
[2026-03-03 12:58:07] 2026-03-03 11:57:15,192 | INFO     | mean y: 2347060.855555556
[2026-03-03 12:58:07] 2026-03-03 11:57:15,192 | INFO     | intersect: -119690849.38740428
[2026-03-03 12:58:07] 2026-03-03 11:57:15,192 | INFO     | chi2: 0.0028318972663745295
[2026-03-03 12:58:07] 2026-03-03 11:57:15,192 | INFO     | current chi2=0.0028318972663745295 (change=7.212289198178587 %)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,192 | INFO     | left removable region: 20
[2026-03-03 12:58:07] 2026-03-03 11:57:15,192 | INFO     | sum of square deviations: 1367709365.0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,193 | INFO     | sum of deviations: 824563199.5000002
[2026-03-03 12:58:07] 2026-03-03 11:57:15,194 | INFO     | mean x: 1772533641.5
[2026-03-03 12:58:07] 2026-03-03 11:57:15,194 | INFO     | mean y: 2346013.8353658537
[2026-03-03 12:58:07] 2026-03-03 11:57:15,194 | INFO     | intersect: -1066277224.4478834
[2026-03-03 12:58:07] 2026-03-03 11:57:15,194 | INFO     | chi2: 0.0020550480477455582
[2026-03-03 12:58:07] 2026-03-03 11:57:15,194 | INFO     | current memory leak: 0.60 B/s (using 164 data points, chi2=0.00)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,194 | INFO     | could have reported an average CPU frequency of 2765 MHz (10 samples)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | ..............................
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . Timing measurements:
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . get job = 0 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . initial setup = 8 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . payload setup = 9 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . stage-in = 0 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . payload execution = 11585 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . stage-out = 1 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | . log creation = 0 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,195 | INFO     | ..............................
[2026-03-03 12:58:07] 2026-03-03 11:57:15,311 | INFO     | 
[2026-03-03 12:58:07] 2026-03-03 11:57:15,311 | INFO     | job summary report
[2026-03-03 12:58:07] 2026-03-03 11:57:15,311 | INFO     | --------------------------------------------------
[2026-03-03 12:58:07] 2026-03-03 11:57:15,311 | INFO     | PanDA job id: 7032742598
[2026-03-03 12:58:07] 2026-03-03 11:57:15,311 | INFO     | task id: 48838462
[2026-03-03 12:58:07] 2026-03-03 11:57:15,311 | INFO     | errors: (none)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | pilot state: finished 
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | transexitcode: 0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | exeerrorcode: 0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | exeerrordiag: 
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | exitcode: 0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | exitmsg: OK
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | cpuconsumptiontime: 45032 s
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | nevents: 400
[2026-03-03 12:58:07] 2026-03-03 11:57:15,312 | INFO     | neventsw: 0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | pid: 1991801
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | pgrp: 1991801
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | corecount: 4
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | event service: False
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | sizes: {0: 2281850, 1: 2282311, 11: 2282311, 11599: 2312258, 11601: 2326077, 11603: 2326455}
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | --------------------------------------------------
[2026-03-03 12:58:07] 2026-03-03 11:57:15,313 | INFO     | 
[2026-03-03 12:58:07] 2026-03-03 11:57:15,314 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-03-03 12:58:07] 2026-03-03 11:57:15,348 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | job 7032742598 has completed (purged errors)
[2026-03-03 12:58:07] 2026-03-03 11:57:15,353 | INFO     | overall cleanup function is called
[2026-03-03 12:58:07] 2026-03-03 11:57:16,362 | INFO     | --- collectZombieJob: --- 10, [1991801]
[2026-03-03 12:58:07] 2026-03-03 11:57:16,362 | INFO     | zombie collector waiting for pid 1991801
[2026-03-03 12:58:07] 2026-03-03 11:57:16,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 12:58:07] 2026-03-03 11:57:16,362 | INFO     | collected zombie processes
[2026-03-03 12:58:07] 2026-03-03 11:57:16,362 | INFO     | will attempt to kill all subprocesses of pid=1991801
[2026-03-03 12:58:07] 2026-03-03 11:57:17,168 | INFO     | process IDs to be killed: [1991801] (in reverse order)
[2026-03-03 12:58:07] 2026-03-03 11:57:17,485 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 12:58:07] 2026-03-03 11:57:17,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 12:58:07] 2026-03-03 11:57:17,514 | INFO     | did not find any defunct processes belonging to 1991801
[2026-03-03 12:58:07] 2026-03-03 11:57:17,541 | INFO     | did not find any defunct processes belonging to 1991801
[2026-03-03 12:58:07] 2026-03-03 11:57:17,542 | INFO     | ready for new job
[2026-03-03 12:58:07] 2026-03-03 11:57:17,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 12:58:07] 2026-03-03 11:57:17,544 | INFO     | **************************************
[2026-03-03 12:58:07] 2026-03-03 11:57:17,544 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 12:58:07] 2026-03-03 11:57:17,545 | INFO     | **************************************
[2026-03-03 12:58:07] 2026-03-03 11:57:17,545 | INFO     | 
[2026-03-03 12:58:07] 2026-03-03 11:57:17,553 | INFO     | architecture information:
[2026-03-03 12:58:07] 2026-03-03 11:57:17,554 | INFO     | executing command: cat /etc/os-release
[2026-03-03 12:58:07] 2026-03-03 11:57:17,578 | INFO     | cat /etc/os-release:
[2026-03-03 12:58:07] NAME="CentOS Linux"
[2026-03-03 12:58:07] VERSION="7 (Core)"
[2026-03-03 12:58:07] ID="centos"
[2026-03-03 12:58:07] ID_LIKE="rhel fedora"
[2026-03-03 12:58:07] VERSION_ID="7"
[2026-03-03 12:58:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 12:58:07] ANSI_COLOR="0;31"
[2026-03-03 12:58:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 12:58:07] HOME_URL="https://www.centos.org/"
[2026-03-03 12:58:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 12:58:07] 
[2026-03-03 12:58:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 12:58:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 12:58:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 12:58:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 12:58:07] 
[2026-03-03 12:58:07] 2026-03-03 11:57:17,579 | INFO     | **************************************
[2026-03-03 12:58:07] 2026-03-03 11:57:18,081 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-03-03 12:58:07] 2026-03-03 11:57:18,106 | INFO     | sufficient remaining disk space (3324800663552 B)
[2026-03-03 12:58:07] 2026-03-03 11:57:18,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 12:58:07] 2026-03-03 11:57:18,106 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 12:58:07] 2026-03-03 11:57:18,107 | INFO     | update_server=False
[2026-03-03 12:58:07] 2026-03-03 11:57:18,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 12:58:07] 2026-03-03 11:57:18,297 | INFO     | all payload control threads have been joined
[2026-03-03 12:58:07] 2026-03-03 11:57:18,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:58:07] 2026-03-03 11:57:18,665 | INFO     | aborting loop
[2026-03-03 12:58:07] 2026-03-03 11:57:18,936 | INFO     | all data control threads have been joined
[2026-03-03 12:58:07] 2026-03-03 11:57:19,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 12:58:07] 2026-03-03 11:57:19,112 | INFO     | [job] retrieve thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,241 | INFO     | all job control threads have been joined
[2026-03-03 12:58:07] 2026-03-03 11:57:19,302 | INFO     | [payload] control thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,524 | INFO     | [payload] failed_post thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,594 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,671 | INFO     | [job] job monitor thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,720 | INFO     | [job] validate thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,915 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:19,942 | INFO     | [data] control thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:20,034 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:20,247 | INFO     | [job] control thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:20,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:58:07] 2026-03-03 11:57:20,601 | INFO     | [data] copytool_in thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:20,659 | INFO     | [payload] validate_post thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:21,078 | INFO     | [data] copytool_out thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:21,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 12:58:07] 2026-03-03 11:57:21,307 | INFO     | [job] queue monitor thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:25,160 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 12:58:07] 2026-03-03 11:57:47,696 | INFO     | PID=1943341 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 12:58:07] 2026-03-03 11:57:47,696 | INFO     | .. there are 17 such processes running
[2026-03-03 12:58:07] 2026-03-03 11:57:47,701 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 12:58:07] 2026-03-03 11:57:47,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 12:58:07] 2026-03-03 11:57:47,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 12:58:07] 2026-03-03 11:58:00,295 | INFO     | [monitor] cgroup control has ended
[2026-03-03 12:58:07] 2026-03-03 11:58:01,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22423751014208)>', '<ExcThread(monitor, started 22423507568384)>']
[2026-03-03 12:58:07] 2026-03-03 11:58:02,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 12:58:07] 2026-03-03 11:58:02,771 | INFO     | [monitor] control thread has ended
[2026-03-03 12:58:07] 2026-03-03 11:58:06,848 | INFO     | all workflow threads have been joined
[2026-03-03 12:58:07] 2026-03-03 11:58:06,848 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 12:58:07] 2026-03-03 11:58:06,848 | INFO     | traces error code: 0
[2026-03-03 12:58:07] 2026-03-03 11:58:06,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 12:58:07] 2026-03-03 11:58:07,088 [wrapper] ==== pilot stdout END ====
[2026-03-03 12:58:07] 2026-03-03 11:58:07,092 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 12:58:07] 2026-03-03 11:58:07,096 [wrapper] pilotpid: 1943341
[2026-03-03 12:58:07] 2026-03-03 11:58:07,101 [wrapper] Pilot exit status: 0
[2026-03-03 12:58:07] 2026-03-03 11:58:07,118 [wrapper] pandaids: 7032742598
[2026-03-03 12:58:07] 2026-03-03 11:58:07,315 [wrapper] cleanup supervisor_pilot 2212861 1943342
[2026-03-03 12:58:07] 2026-03-03 11:58:07,320 [wrapper] Test setup, not cleaning
[2026-03-03 12:58:07] 2026-03-03 11:58:07,324 [wrapper] apfmon messages muted
[2026-03-03 12:58:07] 2026-03-03 11:58:07,329 [wrapper] ==== wrapper stdout END ====
[2026-03-03 12:58:07] 2026-03-03 11:58:07,333 [wrapper] ==== wrapper stderr END ====
[2026-03-03 12:58:07]  *** Error codes and diagnostics ***
[2026-03-03 12:58:07]     "exeErrorCode": 0,
[2026-03-03 12:58:07]     "exeErrorDiag": "",
[2026-03-03 12:58:07]     "pilotErrorCode": 0,
[2026-03-03 12:58:07]     "pilotErrorDiag": "",
[2026-03-03 12:58:07]  *** Listing of results directory ***
[2026-03-03 12:58:07] total 484688
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc      5111 Feb 28 09:11 queuedata.json
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc    584627 Feb 28 09:11 pilot3.tar.gz
[2026-03-03 12:58:07] -rwx------ 1 boinc boinc     36322 Feb 28 09:11 runpilot2-wrapper.sh
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc       100 Mar  3 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 12:58:07] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 09:43 run_atlas
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc       105 Mar  3 09:43 job.xml
[2026-03-03 12:58:07] -rw-r--r-- 2 boinc boinc 276989183 Mar  3 09:43 EVNT.48220133._000101.pool.root.1
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc      6697 Mar  3 09:43 init_data.xml
[2026-03-03 12:58:07] drwxrwx--x 2 boinc boinc      4096 Mar  3 09:43 shared
[2026-03-03 12:58:07] -rw-r--r-- 2 boinc boinc    597966 Mar  3 09:43 input.tar.gz
[2026-03-03 12:58:07] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:43 start_atlas.sh
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc         0 Mar  3 09:43 boinc_lockfile
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc      2561 Mar  3 09:43 pandaJob.out
[2026-03-03 12:58:07] -rw------- 1 boinc boinc    998420 Mar  3 09:43 agis_schedconf.cvmfs.json
[2026-03-03 12:58:07] -rw------- 1 boinc boinc       440 Mar  3 09:43 workernode_map.json
[2026-03-03 12:58:07] drwx------ 5 boinc boinc      4096 Mar  3 09:43 pilot3
[2026-03-03 12:58:07] -rw------- 1 boinc boinc 211473597 Mar  3 12:56 HITS.48838462._002552.pool.root.1
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc       529 Mar  3 12:56 boinc_task_state.xml
[2026-03-03 12:58:07] -rw------- 1 boinc boinc      1024 Mar  3 12:57 memory_monitor_summary.json
[2026-03-03 12:58:07] -rw------- 1 boinc boinc   1516104 Mar  3 12:57 agis_ddmendpoints.agis.ALL.json
[2026-03-03 12:58:07] -rw------- 1 boinc boinc    351316 Mar  3 12:57 log.48838462._002552.job.log.tgz.1
[2026-03-03 12:58:07] -rw------- 1 boinc boinc      6354 Mar  3 12:57 heartbeat.json
[2026-03-03 12:58:07] -rw------- 1 boinc boinc        95 Mar  3 12:57 pilot_heartbeat.json
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc      8192 Mar  3 12:58 boinc_mmap_file
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc        26 Mar  3 12:58 wrapper_checkpoint.txt
[2026-03-03 12:58:07] -rw------- 1 boinc boinc      4832 Mar  3 12:58 pilotlog.txt
[2026-03-03 12:58:07] -rw------- 1 boinc boinc   1609840 Mar  3 12:58 log.48838462._002552.job.log.1
[2026-03-03 12:58:07] -rw------- 1 boinc boinc       357 Mar  3 12:58 output.list
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc       620 Mar  3 12:58 runtime_log
[2026-03-03 12:58:07] -rw------- 1 boinc boinc   1976320 Mar  3 12:58 result.tar.gz
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc      9205 Mar  3 12:58 runtime_log.err
[2026-03-03 12:58:07] -rw------- 1 boinc boinc       666 Mar  3 12:58 6iKNDmSbUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5v4KDmcUWV8n.diag
[2026-03-03 12:58:07] -rw-r--r-- 1 boinc boinc     21177 Mar  3 12:58 stderr.txt
[2026-03-03 12:58:07] HITS file was successfully produced:
[2026-03-03 12:58:07] -rw------- 1 boinc boinc 211473597 Mar  3 12:56 shared/HITS.pool.root.1
[2026-03-03 12:58:07]  *** Contents of shared directory: ***
[2026-03-03 12:58:07] total 479560
[2026-03-03 12:58:07] -rw-r--r-- 2 boinc boinc 276989183 Mar  3 09:43 ATLAS.root_0
[2026-03-03 12:58:07] -rw-r--r-- 2 boinc boinc    597966 Mar  3 09:43 input.tar.gz
[2026-03-03 12:58:07] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:43 start_atlas.sh
[2026-03-03 12:58:07] -rw------- 1 boinc boinc 211473597 Mar  3 12:56 HITS.pool.root.1
[2026-03-03 12:58:07] -rw------- 1 boinc boinc   1976320 Mar  3 12:58 result.tar.gz
12:58:09 (1913849): run_atlas exited; CPU time 45745.283954
12:58:09 (1913849): called boinc_finish(0)

</stderr_txt>
]]>

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