Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-28 10:41:52 (5564): vboxwrapper version 26210
2026-02-28 10:41:52 (5564): BOINC client version: 8.2.4
2026-02-28 10:41:53 (5564): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-28 10:41:53 (5564): Successfully copied 'init_data.xml' to the shared directory.
2026-02-28 10:41:53 (5564): Create VM. (boinc_c379f4fdbeae96c6, slot#0)
2026-02-28 10:41:54 (5564): Setting Memory Size for VM. (4800MB)
2026-02-28 10:41:54 (5564): Setting CPU Count for VM. (8)
2026-02-28 10:41:55 (5564): Setting Chipset Options for VM.
2026-02-28 10:41:55 (5564): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-28 10:41:55 (5564): Setting Boot Options for VM.
2026-02-28 10:41:56 (5564): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-28 10:41:56 (5564): Enabling VM Network Access.
2026-02-28 10:41:56 (5564): Disabling USB Support for VM.
2026-02-28 10:41:56 (5564): Disabling COM Port Support for VM.
2026-02-28 10:41:57 (5564): Disabling LPT Port Support for VM.
2026-02-28 10:41:57 (5564): Disabling Audio Support for VM.
2026-02-28 10:41:57 (5564): Disabling Clipboard Support for VM.
2026-02-28 10:41:57 (5564): Disabling Drag and Drop Support for VM.
2026-02-28 10:41:58 (5564): Adding storage controller(s) to VM.
2026-02-28 10:41:58 (5564): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-28 10:42:00 (5564): Adding VirtualBox Guest Additions to VM.
2026-02-28 10:42:01 (5564): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-28 10:42:01 (5564): forwarding host port 53173 to guest port 80
2026-02-28 10:42:01 (5564): Enabling remote desktop for VM.
2026-02-28 10:42:02 (5564): Enabling shared directory for VM.
2026-02-28 10:42:02 (5564): Starting VM using VBoxManage interface. (boinc_c379f4fdbeae96c6, slot#0)
2026-02-28 10:42:09 (5564): Successfully started VM. (PID = '9392')
2026-02-28 10:42:09 (5564): Reporting VM Process ID to BOINC.
2026-02-28 10:42:09 (5564): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-28 10:42:09 (5564): Guest Log: CPUID EDX: 0x178bfbff
2026-02-28 10:42:09 (5564): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-28 10:42:09 (5564): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-28 10:42:09 (5564): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-28 10:42:09 (5564): Detected: Web Application Enabled (http://localhost:53173)
2026-02-28 10:42:09 (5564): Detected: Remote Desktop Enabled (localhost:53174)
2026-02-28 10:42:09 (5564): Preference change detected
2026-02-28 10:42:09 (5564): Setting CPU throttle for VM. (100%)
2026-02-28 10:42:09 (5564): Setting checkpoint interval to 1400 seconds. (Higher value of (Preference: 1400 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-28 10:42:11 (5564): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-28 10:42:11 (5564): Guest Log: BIOS: Booting from Hard Disk...
2026-02-28 10:42:15 (5564): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-28 10:42:15 (5564): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-28 10:42:15 (5564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-28 10:42:28 (5564): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-28 10:42:28 (5564): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-28 10:42:44 (5564): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000185 main     Log opened 2026-02-28T10:42:42.611245000Z
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000359 main     OS Product: Linux
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000411 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000457 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000493 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000495 main     Process ID: 1383
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.000496 main     Package type: LINUX_64BITS_GENERIC
2026-02-28 10:42:44 (5564): Guest Log: 00:00:00.002434 main     5.2.32 r132073 started. Verbose level = 0
2026-02-28 10:42:45 (5564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-28 10:42:45 (5564): Guest Log: [INFO] Mounting shared directory
2026-02-28 10:42:45 (5564): Guest Log: [INFO] Checking for init_data.xml
2026-02-28 10:42:51 (5564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-28 10:42:51 (5564): Guest Log: [INFO] Detected branch: prod
2026-02-28 10:42:52 (5564): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-28 10:42:52 (5564): Guest Log: Copying input files
2026-02-28 10:42:54 (5564): Guest Log: Copied input files into RunAtlas.
2026-02-28 10:42:54 (5564): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-28 10:42:54 (5564): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-28 10:42:54 (5564): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-28 10:42:54 (5564): Guest Log: Further information can be found at the LHC@home message board.
2026-02-28 10:42:54 (5564): Guest Log: 00:00:10.005676 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 562 267 000ns (GuestNow=1 772 304 174 177 976 000 ns GuestLast=1 772 275 362 615 709 000 ns fSetTimeLastLoop=true )
2026-02-28 10:43:05 (5564): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-28 10:43:06 (5564): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-28 10:43:06 (5564): Guest Log: 2.6.3.0 1664 0 30124 156741 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-28 10:43:10 (5564): Guest Log: copied the webapp to /var/www
2026-02-28 10:43:10 (5564): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-28 10:43:10 (5564): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-28 10:43:12 (5564): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-28 10:43:12 (5564): Guest Log:  *** Starting ATLAS job. (PandaID=7032911986 taskID=48838476) ***
2026-02-28 12:22:51 (5564): Status Report: Elapsed Time: '6000.000000'
2026-02-28 12:22:51 (5564): Status Report: CPU Time: '31845.656250'
2026-02-28 14:03:51 (5564): Status Report: Elapsed Time: '12000.000000'
2026-02-28 14:03:51 (5564): Status Report: CPU Time: '79466.015625'
2026-02-28 15:21:49 (5564): Guest Log:  *** Job finished ***
2026-02-28 15:21:49 (5564): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:26,705 | INFO     | all workflow threads have been joined
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:26,705 | INFO     | end of generic workflow (traces error code: 0)
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:26,705 | INFO     | traces error code: 0
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:26,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:46,982 | INFO     | PID=6235 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:46,983 | INFO     | found 0 job(s) in 20 queues
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:46,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:46,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:46,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:46,984 | INFO     | [monitor] control thread has ended
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,125 [wrapper] ==== pilot stdout END ====
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,131 [wrapper] ==== wrapper stdout RESUME ====
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,136 [wrapper] pilotpid: 6235
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,142 [wrapper] Pilot exit status: 0
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,334 [wrapper] pandaids: 7032911986
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,376 [wrapper] cleanup supervisor_pilot 29180 6236
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,392 [wrapper] Test setup, not cleaning
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,398 [wrapper] apfmon messages muted
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,404 [wrapper] ==== wrapper stdout END ====
2026-02-28 15:21:49 (5564): Guest Log: 2026-02-28 23:21:47,410 [wrapper] ==== wrapper stderr END ====
2026-02-28 15:21:49 (5564): Guest Log:  *** Error codes and diagnostics ***
2026-02-28 15:21:49 (5564): Guest Log:     "exeErrorCode": 0,
2026-02-28 15:21:49 (5564): Guest Log:     "exeErrorDiag": "",
2026-02-28 15:21:49 (5564): Guest Log:     "pilotErrorCode": 0,
2026-02-28 15:21:49 (5564): Guest Log:     "pilotErrorDiag": "",
2026-02-28 15:21:49 (5564): Guest Log:  *** Listing of results directory ***
2026-02-28 15:21:49 (5564): Guest Log: total 210168
2026-02-28 15:21:49 (5564): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 28 08:11 queuedata.json
2026-02-28 15:21:49 (5564): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 28 08:11 pilot3.tar.gz
2026-02-28 15:21:49 (5564): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 28 08:11 runpilot2-wrapper.sh
2026-02-28 15:21:49 (5564): Guest Log: -rwxr-xr-x. 1 atlas atlas      7819 Feb 28 18:42 init_data.xml
2026-02-28 15:21:49 (5564): Guest Log: -rwxr-xr-x. 1 atlas atlas    597981 Feb 28 18:42 input.tar.gz
2026-02-28 15:21:49 (5564): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 28 18:42 start_atlas.sh
2026-02-28 15:21:49 (5564): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 28 18:42 EVNT.48220149._000019.pool.root.1 -> /data/./ATLAS.root_0
2026-02-28 15:21:49 (5564): Guest Log: -rw-r--r--. 1 atlas atlas      2587 Feb 28 18:43 pandaJob.out
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas    998790 Feb 28 18:53 agis_schedconf.cvmfs.json
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas       419 Feb 28 18:53 workernode_map.json
2026-02-28 15:21:49 (5564): Guest Log: drwx------. 5 atlas atlas      4096 Feb 28 18:54 pilot3
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas 205966320 Feb 28 23:20 HITS.48838476._000480.pool.root.1
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas      1034 Feb 28 23:21 memory_monitor_summary.json
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 28 23:21 agis_ddmendpoints.agis.ALL.json
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas    483665 Feb 28 23:21 log.48838476._000480.job.log.tgz.1
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas      6334 Feb 28 23:21 heartbeat.json
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas        95 Feb 28 23:21 pilot_heartbeat.json
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas       744 Feb 28 23:21 pilotlog.txt
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas   2208984 Feb 28 23:21 log.48838476._000480.job.log.1
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas       357 Feb 28 23:21 output.list
2026-02-28 15:21:49 (5564): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 28 23:21 runtime_log
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas   2713600 Feb 28 23:21 result.tar.gz
2026-02-28 15:21:49 (5564): Guest Log: -rw-r--r--. 1 atlas atlas      8781 Feb 28 23:21 runtime_log.err
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas       672 Feb 28 23:21 c0IODmTbUG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJd6KDm6s9hNo.diag
2026-02-28 15:21:49 (5564): Guest Log: Looking for outputfile HITS.48838476._000480.pool.root.1
2026-02-28 15:21:49 (5564): Guest Log: HITS file was successfully produced
2026-02-28 15:21:49 (5564): Guest Log: -rw-------. 1 atlas atlas 205966320 Feb 28 23:20 /home/atlas/RunAtlas/HITS.48838476._000480.pool.root.1
2026-02-28 15:21:50 (5564): Guest Log: Successfully finished the ATLAS job!
2026-02-28 15:21:50 (5564): Guest Log: Copying the results back to the shared directory!
2026-02-28 15:21:50 (5564): Guest Log:  *** Contents of shared directory: ***
2026-02-28 15:21:51 (5564): Guest Log: total 476812
2026-02-28 15:21:51 (5564): Guest Log: -rwxrwxrwx. 1 root root 278949426 Feb 28 18:41 ATLAS.root_0
2026-02-28 15:21:51 (5564): Guest Log: -rwxrwxrwx. 1 root root 205966320 Feb 28 23:21 HITS.pool.root.1
2026-02-28 15:21:51 (5564): Guest Log: -rwxrwxrwx. 1 root root      7819 Feb 28 18:41 init_data.xml
2026-02-28 15:21:51 (5564): Guest Log: -rwxrwxrwx. 1 root root    597981 Feb 28 13:04 input.tar.gz
2026-02-28 15:21:51 (5564): Guest Log: -rwxrwxrwx. 1 root root   2713600 Feb 28 23:21 result.tar.gz
2026-02-28 15:21:51 (5564): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 28 13:04 start_atlas.sh
2026-02-28 15:21:51 (5564): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-28 15:21:51 (5564): VM Completion File Detected.
2026-02-28 15:21:51 (5564): Powering off VM.
2026-02-28 15:21:53 (5564): Successfully stopped VM.
2026-02-28 15:21:53 (5564): Deregistering VM. (boinc_c379f4fdbeae96c6, slot#0)
2026-02-28 15:21:53 (5564): Removing network bandwidth throttle group from VM.
2026-02-28 15:21:53 (5564): Removing VM from VirtualBox.
2026-02-28 15:21:58 (5564): called boinc_finish(0)

</stderr_txt>
]]>

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