Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:38 (2779722): wrapper (7.7.26015): starting
15:31:38 (2779722): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 15:31:38] Arguments: --nthreads 8
[2026-02-28 15:31:38] Threads: 8
[2026-02-28 15:31:38] Checking for CVMFS
[2026-02-28 15:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 15:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 15:31:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 15:31:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 15:31:39] 2.13.3.0 10119 93991 128984 156744 2 57 32788426 39288832 9611 16776704 0 61269877 99.603 74052450 39812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-28 15:31:39] CVMFS is ok
[2026-02-28 15:31:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 15:31:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 15:31:39] Further information can be found at the LHC@home message board.
[2026-02-28 15:31:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 15:31:39] Checking for apptainer binary...
[2026-02-28 15:31:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 15:31:39] Running /usr/bin/apptainer --version
[2026-02-28 15:31:41] apptainer version 1.4.5-2.el9
[2026-02-28 15:31:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 15:31:42] c-210-1.aglt2.org
[2026-02-28 15:31:42] apptainer works
[2026-02-28 15:31:42] Set ATHENA_PROC_NUMBER=8
[2026-02-28 15:31:42] Set ATHENA_CORE_NUMBER=8
[2026-02-28 15:31:42] Starting ATLAS job with PandaID=7033112887
[2026-02-28 15:31:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 23:47:19]  *** The last 200 lines of the pilot log: ***
[2026-02-28 23:47:19] 2026-03-01 04:46:46,110 | INFO     | preparing for final server update for job 7033112887 in state='finished'
[2026-02-28 23:47:19] 2026-03-01 04:46:46,110 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7033112887/jobReport.json
[2026-02-28 23:47:19] 2026-03-01 04:46:46,114 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-28 23:47:19] 2026-03-01 04:46:46,115 | INFO     | this job has now completed (state=finished)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,115 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,115 | INFO     | log transfer has been attempted: DONE
[2026-02-28 23:47:19] 2026-03-01 04:46:46,115 | INFO     | job 7033112887 has finished - writing final server update
[2026-02-28 23:47:19] 2026-03-01 04:46:46,115 | INFO     | total number of processed events: 400 (read)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,134 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7033112887/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,135 | INFO     | extracted standard info from prmon json
[2026-02-28 23:47:19] 2026-03-01 04:46:46,135 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 23:47:19] 2026-03-01 04:46:46,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 23:47:19] 2026-03-01 04:46:46,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 23:47:19] 2026-03-01 04:46:46,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 23:47:19] 2026-03-01 04:46:46,158 | INFO     | fitting pss+swap vs Time
[2026-02-28 23:47:19] 2026-03-01 04:46:46,159 | INFO     | sum of square deviations: 35374834535.70308
[2026-02-28 23:47:19] 2026-03-01 04:46:46,165 | INFO     | sum of deviations: -39076683077.00619
[2026-02-28 23:47:19] 2026-03-01 04:46:46,165 | INFO     | mean x: 1772325619.6247423
[2026-02-28 23:47:19] 2026-03-01 04:46:46,165 | INFO     | mean y: 2551054.950515464
[2026-02-28 23:47:19] 2026-03-01 04:46:46,165 | INFO     | intersect: 1960344143.0690036
[2026-02-28 23:47:19] 2026-03-01 04:46:46,166 | INFO     | chi2: 3.210218280869869
[2026-02-28 23:47:19] 2026-03-01 04:46:46,167 | INFO     | sum of square deviations: 34292078738.731316
[2026-02-28 23:47:19] 2026-03-01 04:46:46,173 | INFO     | sum of deviations: -7368802542.618765
[2026-02-28 23:47:19] 2026-03-01 04:46:46,173 | INFO     | mean x: 1772325467.13125
[2026-02-28 23:47:19] 2026-03-01 04:46:46,173 | INFO     | mean y: 2555484.247916667
[2026-02-28 23:47:19] 2026-03-01 04:46:46,174 | INFO     | intersect: 383399016.8913365
[2026-02-28 23:47:19] 2026-03-01 04:46:46,174 | INFO     | chi2: 2.5278154260421113
[2026-02-28 23:47:19] 2026-03-01 04:46:46,174 | INFO     | current chi2=2.5278154260421113 (change=21.257210417568484 %)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,175 | INFO     | right removable region: 479
[2026-02-28 23:47:19] 2026-03-01 04:46:46,175 | INFO     | sum of square deviations: 34291893908.731297
[2026-02-28 23:47:19] 2026-03-01 04:46:46,181 | INFO     | sum of deviations: -139625277308.56247
[2026-02-28 23:47:19] 2026-03-01 04:46:46,181 | INFO     | mean x: 1772325772.13125
[2026-02-28 23:47:19] 2026-03-01 04:46:46,182 | INFO     | mean y: 2565168.7708333335
[2026-02-28 23:47:19] 2026-03-01 04:46:46,182 | INFO     | intersect: 7218890930.00066
[2026-02-28 23:47:19] 2026-03-01 04:46:46,185 | INFO     | chi2: 1.2611608881890108
[2026-02-28 23:47:19] 2026-03-01 04:46:46,185 | INFO     | current chi2=1.2611608881890108 (change=60.71417025737964 %)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,186 | INFO     | sum of square deviations: 33231279281.717907
[2026-02-28 23:47:19] 2026-03-01 04:46:46,192 | INFO     | sum of deviations: -146451605117.1031
[2026-02-28 23:47:19] 2026-03-01 04:46:46,192 | INFO     | mean x: 1772325924.6378946
[2026-02-28 23:47:19] 2026-03-01 04:46:46,192 | INFO     | mean y: 2566144.0168421054
[2026-02-28 23:47:19] 2026-03-01 04:46:46,192 | INFO     | intersect: 7813278884.066838
[2026-02-28 23:47:19] 2026-03-01 04:46:46,193 | INFO     | chi2: 1.2341596891973614
[2026-02-28 23:47:19] 2026-03-01 04:46:46,193 | INFO     | current chi2=1.2341596891973614 (change=2.1409797310176932 %)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,193 | INFO     | left removable region: 20
[2026-02-28 23:47:19] 2026-03-01 04:46:46,194 | INFO     | sum of square deviations: 29984913565.612175
[2026-02-28 23:47:19] 2026-03-01 04:46:46,210 | INFO     | sum of deviations: -68306048852.017395
[2026-02-28 23:47:19] 2026-03-01 04:46:46,210 | INFO     | mean x: 1772326046.6557734
[2026-02-28 23:47:19] 2026-03-01 04:46:46,210 | INFO     | mean y: 2563902.063180828
[2026-02-28 23:47:19] 2026-03-01 04:46:46,210 | INFO     | intersect: 4039947210.1614556
[2026-02-28 23:47:19] 2026-03-01 04:46:46,211 | INFO     | chi2: 0.42908661154463634
[2026-02-28 23:47:19] 2026-03-01 04:46:46,211 | INFO     | current memory leak: -2.28 B/s (using 459 data points, chi2=0.43)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,212 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,212 | INFO     | ..............................
[2026-02-28 23:47:19] 2026-03-01 04:46:46,212 | INFO     | . Timing measurements:
[2026-02-28 23:47:19] 2026-03-01 04:46:46,212 | INFO     | . get job = 0 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | . initial setup = 31 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | . payload setup = 32 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | . stage-in = 0 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | . payload execution = 29560 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | . stage-out = 3 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | . log creation = 0 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,213 | INFO     | ..............................
[2026-02-28 23:47:19] 2026-03-01 04:46:46,410 | INFO     | 
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | job summary report
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | --------------------------------------------------
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | PanDA job id: 7033112887
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | task id: 48786978
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | errors: (none)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | pilot state: finished 
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | transexitcode: 0
[2026-02-28 23:47:19] 2026-03-01 04:46:46,411 | INFO     | exeerrorcode: 0
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | exeerrordiag: 
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | exitcode: 0
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | exitmsg: OK
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | cpuconsumptiontime: 70245 s
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | nevents: 400
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | neventsw: 0
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | pid: 2789013
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | pgrp: 2789013
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | corecount: 8
[2026-02-28 23:47:19] 2026-03-01 04:46:46,412 | INFO     | event service: False
[2026-02-28 23:47:19] 2026-03-01 04:46:46,413 | INFO     | sizes: {0: 2281156, 1: 2281841, 2: 2282302, 13: 2282302, 29598: 2320705, 29602: 2329703, 29604: 2329887, 29605: 2330081}
[2026-02-28 23:47:19] 2026-03-01 04:46:46,413 | INFO     | --------------------------------------------------
[2026-02-28 23:47:19] 2026-03-01 04:46:46,413 | INFO     | 
[2026-02-28 23:47:19] 2026-03-01 04:46:46,413 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-28 23:47:19] 2026-03-01 04:46:46,445 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,445 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 23:47:19] 2026-03-01 04:46:46,448 | INFO     | job 7033112887 has completed (purged errors)
[2026-02-28 23:47:19] 2026-03-01 04:46:46,448 | INFO     | overall cleanup function is called
[2026-02-28 23:47:19] 2026-03-01 04:46:47,493 | INFO     | --- collectZombieJob: --- 10, [2789013]
[2026-02-28 23:47:19] 2026-03-01 04:46:47,494 | INFO     | zombie collector waiting for pid 2789013
[2026-02-28 23:47:19] 2026-03-01 04:46:47,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 23:47:19] 2026-03-01 04:46:47,494 | INFO     | collected zombie processes
[2026-02-28 23:47:19] 2026-03-01 04:46:47,494 | INFO     | will attempt to kill all subprocesses of pid=2789013
[2026-02-28 23:47:19] 2026-03-01 04:46:47,744 | INFO     | process IDs to be killed: [2789013] (in reverse order)
[2026-02-28 23:47:19] 2026-03-01 04:46:47,816 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 23:47:19] 2026-03-01 04:46:47,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 23:47:19] 2026-03-01 04:46:47,848 | INFO     | did not find any defunct processes belonging to 2789013
[2026-02-28 23:47:19] 2026-03-01 04:46:47,871 | INFO     | did not find any defunct processes belonging to 2789013
[2026-02-28 23:47:19] 2026-03-01 04:46:47,872 | INFO     | ready for new job
[2026-02-28 23:47:19] 2026-03-01 04:46:47,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 23:47:19] 2026-03-01 04:46:47,875 | INFO     | **************************************
[2026-02-28 23:47:19] 2026-03-01 04:46:47,875 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 23:47:19] 2026-03-01 04:46:47,875 | INFO     | **************************************
[2026-02-28 23:47:19] 2026-03-01 04:46:47,875 | INFO     | 
[2026-02-28 23:47:19] 2026-03-01 04:46:47,878 | INFO     | architecture information:
[2026-02-28 23:47:19] 2026-03-01 04:46:47,879 | INFO     | executing command: cat /etc/os-release
[2026-02-28 23:47:19] 2026-03-01 04:46:47,929 | INFO     | cat /etc/os-release:
[2026-02-28 23:47:19] NAME="CentOS Linux"
[2026-02-28 23:47:19] VERSION="7 (Core)"
[2026-02-28 23:47:19] ID="centos"
[2026-02-28 23:47:19] ID_LIKE="rhel fedora"
[2026-02-28 23:47:19] VERSION_ID="7"
[2026-02-28 23:47:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 23:47:19] ANSI_COLOR="0;31"
[2026-02-28 23:47:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 23:47:19] HOME_URL="https://www.centos.org/"
[2026-02-28 23:47:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 23:47:19] 
[2026-02-28 23:47:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 23:47:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 23:47:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 23:47:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 23:47:19] 
[2026-02-28 23:47:19] 2026-03-01 04:46:47,929 | INFO     | **************************************
[2026-02-28 23:47:19] 2026-03-01 04:46:48,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-28 23:47:19] 2026-03-01 04:46:48,595 | INFO     | sufficient remaining disk space (52961476608 B)
[2026-02-28 23:47:19] 2026-03-01 04:46:48,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 23:47:19] 2026-03-01 04:46:48,596 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 23:47:19] 2026-03-01 04:46:48,596 | INFO     | update_server=False
[2026-02-28 23:47:19] 2026-03-01 04:46:48,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 23:47:19] 2026-03-01 04:46:48,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 23:47:19] 2026-03-01 04:46:48,616 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 23:47:19] 2026-03-01 04:46:48,617 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 23:47:19] 2026-03-01 04:46:48,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 23:47:19] 2026-03-01 04:46:48,617 | INFO     | will abort loop
[2026-02-28 23:47:19] 2026-03-01 04:46:48,917 | INFO     | all job control threads have been joined
[2026-02-28 23:47:19] 2026-03-01 04:46:49,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 23:47:19] 2026-03-01 04:46:49,602 | INFO     | [job] retrieve thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:49,609 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:49,611 | INFO     | all data control threads have been joined
[2026-02-28 23:47:19] 2026-03-01 04:46:49,624 | INFO     | [job] job monitor thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:49,624 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:49,688 | INFO     | all payload control threads have been joined
[2026-02-28 23:47:19] 2026-03-01 04:46:49,868 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:49,923 | INFO     | [job] control thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:50,551 | INFO     | [job] validate thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:50,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:50,618 | INFO     | [data] control thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:50,653 | INFO     | [payload] validate_post thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:50,695 | INFO     | [payload] control thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:51,064 | INFO     | [data] copytool_out thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:51,101 | INFO     | [data] copytool_in thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:51,200 | INFO     | [payload] failed_post thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:51,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 23:47:19] 2026-03-01 04:46:52,422 | INFO     | [job] queue monitor thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:46:52,627 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 23:47:19] 2026-03-01 04:47:00,220 | INFO     | [monitor] cgroup control has ended
[2026-02-28 23:47:19] 2026-03-01 04:47:00,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031590246208)>', '<ExcThread(monitor, started 140031217882880)>']
[2026-02-28 23:47:19] 2026-03-01 04:47:05,857 | INFO     | all workflow threads have been joined
[2026-02-28 23:47:19] 2026-03-01 04:47:05,858 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 23:47:19] 2026-03-01 04:47:05,858 | INFO     | traces error code: 0
[2026-02-28 23:47:19] 2026-03-01 04:47:05,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 23:47:19] 2026-03-01 04:47:18,558 | INFO     | PID=2783912 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 23:47:19] 2026-03-01 04:47:18,558 | INFO     | .. there are 7 such processes running
[2026-02-28 23:47:19] 2026-03-01 04:47:18,558 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 23:47:19] 2026-03-01 04:47:18,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 23:47:19] 2026-03-01 04:47:18,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 23:47:19] 2026-03-01 04:47:18,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 23:47:19] 2026-03-01 04:47:18,559 | CRITICAL | thread 'MainThread' is not alive
[2026-02-28 23:47:19] 2026-03-01 04:47:18,559 | INFO     | [monitor] control thread has ended
[2026-02-28 23:47:19] 2026-03-01 04:47:18,762 [wrapper] ==== pilot stdout END ====
[2026-02-28 23:47:19] 2026-03-01 04:47:18,816 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 23:47:19] 2026-03-01 04:47:18,881 [wrapper] pilotpid: 2783912
[2026-02-28 23:47:19] 2026-03-01 04:47:18,930 [wrapper] Pilot exit status: 0
[2026-02-28 23:47:19] 2026-03-01 04:47:19,111 [wrapper] pandaids: 7033112887
[2026-02-28 23:47:19] 2026-03-01 04:47:19,368 [wrapper] cleanup supervisor_pilot 3462236 2783913
[2026-02-28 23:47:19] 2026-03-01 04:47:19,414 [wrapper] Test setup, not cleaning
[2026-02-28 23:47:19] 2026-03-01 04:47:19,458 [wrapper] apfmon messages muted
[2026-02-28 23:47:19] 2026-03-01 04:47:19,498 [wrapper] ==== wrapper stdout END ====
[2026-02-28 23:47:19] 2026-03-01 04:47:19,518 [wrapper] ==== wrapper stderr END ====
[2026-02-28 23:47:19]  *** Error codes and diagnostics ***
[2026-02-28 23:47:19]     "exeErrorCode": 0,
[2026-02-28 23:47:19]     "exeErrorDiag": "",
[2026-02-28 23:47:19]     "pilotErrorCode": 0,
[2026-02-28 23:47:19]     "pilotErrorDiag": "",
[2026-02-28 23:47:19]  *** Listing of results directory ***
[2026-02-28 23:47:19] total 469428
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas    584627 Feb 28 07:40 pilot3.tar.gz
[2026-02-28 23:47:19] -rwx------. 1 boincer umatlas     36322 Feb 28 07:45 runpilot2-wrapper.sh
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas      5111 Feb 28 07:48 queuedata.json
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas       100 Feb 28 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 23:47:19] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 28 15:31 run_atlas
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas       105 Feb 28 15:31 job.xml
[2026-02-28 23:47:19] -rw-r--r--. 2 boincer umatlas 276475773 Feb 28 15:31 EVNT.48786971._000009.pool.root.1
[2026-02-28 23:47:19] -rw-r--r--. 2 boincer umatlas     15845 Feb 28 15:31 start_atlas.sh
[2026-02-28 23:47:19] drwxrwx--x. 2 boincer umatlas      4096 Feb 28 15:31 shared
[2026-02-28 23:47:19] -rw-r--r--. 2 boincer umatlas    597935 Feb 28 15:31 input.tar.gz
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas         0 Feb 28 15:31 boinc_lockfile
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas      2545 Feb 28 15:31 pandaJob.out
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas        57 Feb 28 15:31 setup.sh.local
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas    998790 Feb 28 15:32 agis_schedconf.cvmfs.json
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas       441 Feb 28 15:33 workernode_map.json
[2026-02-28 23:47:19] drwx------. 5 boincer umatlas      4096 Feb 28 15:33 pilot3
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas      6659 Feb 28 23:37 init_data.xml
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas 191031131 Feb 28 23:45 HITS.48786978._000010.pool.root.1
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas       531 Feb 28 23:46 boinc_task_state.xml
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas      1044 Feb 28 23:46 memory_monitor_summary.json
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas   1513015 Feb 28 23:46 agis_ddmendpoints.agis.ALL.json
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas    662223 Feb 28 23:46 log.48786978._000010.job.log.tgz.1
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas        95 Feb 28 23:46 pilot_heartbeat.json
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas      6381 Feb 28 23:46 heartbeat.json
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas       892 Feb 28 23:47 pilotlog.txt
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas      8192 Feb 28 23:47 boinc_mmap_file
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas        28 Feb 28 23:47 wrapper_checkpoint.txt
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas   3969874 Feb 28 23:47 log.48786978._000010.job.log.1
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas       357 Feb 28 23:47 output.list
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas       620 Feb 28 23:47 runtime_log
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas   4648960 Feb 28 23:47 result.tar.gz
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas      9337 Feb 28 23:47 runtime_log.err
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas       657 Feb 28 23:47 mPbNDmFsYG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQY5KDmGoeBhm.diag
[2026-02-28 23:47:19] -rw-r--r--. 1 boincer umatlas     21329 Feb 28 23:47 stderr.txt
[2026-02-28 23:47:19] HITS file was successfully produced:
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas 191031131 Feb 28 23:45 shared/HITS.pool.root.1
[2026-02-28 23:47:19]  *** Contents of shared directory: ***
[2026-02-28 23:47:19] total 461696
[2026-02-28 23:47:19] -rw-r--r--. 2 boincer umatlas 276475773 Feb 28 15:31 ATLAS.root_0
[2026-02-28 23:47:19] -rw-r--r--. 2 boincer umatlas     15845 Feb 28 15:31 start_atlas.sh
[2026-02-28 23:47:19] -rw-r--r--. 2 boincer umatlas    597935 Feb 28 15:31 input.tar.gz
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas 191031131 Feb 28 23:45 HITS.pool.root.1
[2026-02-28 23:47:19] -rw-------. 1 boincer umatlas   4648960 Feb 28 23:47 result.tar.gz
23:47:21 (2779722): run_atlas exited; CPU time 70991.005680
23:47:21 (2779722): called boinc_finish(0)

</stderr_txt>
]]>

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