Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:48 (26409): wrapper (7.7.26015): starting
08:23:48 (26409): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 08:23:48] Arguments: --nthreads 8
[2026-03-01 08:23:48] Threads: 8
[2026-03-01 08:23:48] Checking for CVMFS
[2026-03-01 08:23:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 08:23:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 08:23:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 08:23:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 08:23:51] 2.11.2.0 29161 108533 135024 156762 0 53 21895518 25165825 899 130560 155 38582353 99.800 30119024 1094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-01 08:23:51] CVMFS is ok
[2026-03-01 08:23:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 08:23:51] Checking for apptainer binary...
[2026-03-01 08:23:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 08:23:51] Running /usr/bin/apptainer --version
[2026-03-01 08:23:51] apptainer version 1.3.2-1.el7
[2026-03-01 08:23:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 08:24:09] cg-vwn454.simple-grid.lan
[2026-03-01 08:24:09] apptainer works
[2026-03-01 08:24:09] Set ATHENA_PROC_NUMBER=8
[2026-03-01 08:24:09] Set ATHENA_CORE_NUMBER=8
[2026-03-01 08:24:10] Starting ATLAS job with PandaID=7033009901
[2026-03-01 08:24:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 12:27:34]  *** The last 200 lines of the pilot log: ***
[2026-03-01 12:27:34] 2026-03-01 11:26:40,946 | INFO     | log transfer has been attempted: DONE
[2026-03-01 12:27:34] 2026-03-01 11:26:40,946 | INFO     | job 7033009901 has finished - writing final server update
[2026-03-01 12:27:34] 2026-03-01 11:26:40,946 | INFO     | total number of processed events: 400 (read)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,948 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7033009901/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,949 | INFO     | extracted standard info from prmon json
[2026-03-01 12:27:34] 2026-03-01 11:26:40,949 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 12:27:34] 2026-03-01 11:26:40,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 12:27:34] 2026-03-01 11:26:40,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 12:27:34] 2026-03-01 11:26:40,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 12:27:34] 2026-03-01 11:26:40,954 | INFO     | fitting pss+swap vs Time
[2026-03-01 12:27:34] 2026-03-01 11:26:40,955 | INFO     | sum of square deviations: 3626997170.9955883
[2026-03-01 12:27:34] 2026-03-01 11:26:40,957 | INFO     | sum of deviations: 105496710005.7798
[2026-03-01 12:27:34] 2026-03-01 11:26:40,957 | INFO     | mean x: 1772357458.0044053
[2026-03-01 12:27:34] 2026-03-01 11:26:40,957 | INFO     | mean y: 2425509.220264317
[2026-03-01 12:27:34] 2026-03-01 11:26:40,957 | INFO     | intersect: -51549277444.64433
[2026-03-01 12:27:34] 2026-03-01 11:26:40,957 | INFO     | chi2: 9.418968535604456
[2026-03-01 12:27:34] 2026-03-01 11:26:40,958 | INFO     | sum of square deviations: 3392565173.4954906
[2026-03-01 12:27:34] 2026-03-01 11:26:40,960 | INFO     | sum of deviations: 118169880889.27927
[2026-03-01 12:27:34] 2026-03-01 11:26:40,960 | INFO     | mean x: 1772357305.5045044
[2026-03-01 12:27:34] 2026-03-01 11:26:40,960 | INFO     | mean y: 2433577.720720721
[2026-03-01 12:27:34] 2026-03-01 11:26:40,960 | INFO     | intersect: -61732342609.030594
[2026-03-01 12:27:34] 2026-03-01 11:26:40,960 | INFO     | chi2: 8.741528190516998
[2026-03-01 12:27:34] 2026-03-01 11:26:40,961 | INFO     | current chi2=8.741528190516998 (change=7.192298631497485 %)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,961 | INFO     | right removable region: 221
[2026-03-01 12:27:34] 2026-03-01 11:26:40,961 | INFO     | sum of square deviations: 3392564563.4954906
[2026-03-01 12:27:34] 2026-03-01 11:26:40,967 | INFO     | sum of deviations: 26289385587.342384
[2026-03-01 12:27:34] 2026-03-01 11:26:40,967 | INFO     | mean x: 1772357610.5045044
[2026-03-01 12:27:34] 2026-03-01 11:26:40,967 | INFO     | mean y: 2477003.6576576577
[2026-03-01 12:27:34] 2026-03-01 11:26:40,968 | INFO     | intersect: -13731732544.651102
[2026-03-01 12:27:34] 2026-03-01 11:26:40,968 | INFO     | chi2: 4.160924680843715
[2026-03-01 12:27:34] 2026-03-01 11:26:40,968 | INFO     | current chi2=4.160924680843715 (change=55.823987890870576 %)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,969 | INFO     | sum of square deviations: 3168457730.9953957
[2026-03-01 12:27:34] 2026-03-01 11:26:40,970 | INFO     | sum of deviations: -34879469334.83873
[2026-03-01 12:27:34] 2026-03-01 11:26:40,970 | INFO     | mean x: 1772357763.0046084
[2026-03-01 12:27:34] 2026-03-01 11:26:40,971 | INFO     | mean y: 2518573.8387096776
[2026-03-01 12:27:34] 2026-03-01 11:26:40,971 | INFO     | intersect: 19513240664.381393
[2026-03-01 12:27:34] 2026-03-01 11:26:40,971 | INFO     | chi2: 1.2578502568967826
[2026-03-01 12:27:34] 2026-03-01 11:26:40,971 | INFO     | current chi2=1.2578502568967826 (change=69.7699344886549 %)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,972 | INFO     | sum of square deviations: 2954444110.9952765
[2026-03-01 12:27:34] 2026-03-01 11:26:40,973 | INFO     | sum of deviations: -47951999136.24057
[2026-03-01 12:27:34] 2026-03-01 11:26:40,974 | INFO     | mean x: 1772357915.5047169
[2026-03-01 12:27:34] 2026-03-01 11:26:40,974 | INFO     | mean y: 2527768.7405660376
[2026-03-01 12:27:34] 2026-03-01 11:26:40,974 | INFO     | intersect: 28768719323.04992
[2026-03-01 12:27:34] 2026-03-01 11:26:40,974 | INFO     | chi2: 0.9694646928789518
[2026-03-01 12:27:34] 2026-03-01 11:26:40,974 | INFO     | current chi2=0.9694646928789518 (change=22.926859730450044 %)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,974 | INFO     | left removable region: 30
[2026-03-01 12:27:34] 2026-03-01 11:26:40,975 | INFO     | sum of square deviations: 2160557048.9947653
[2026-03-01 12:27:34] 2026-03-01 11:26:40,976 | INFO     | sum of deviations: -11767797202.863874
[2026-03-01 12:27:34] 2026-03-01 11:26:40,976 | INFO     | mean x: 1772358190.0052357
[2026-03-01 12:27:34] 2026-03-01 11:26:40,976 | INFO     | mean y: 2521561.8638743456
[2026-03-01 12:27:34] 2026-03-01 11:26:40,977 | INFO     | intersect: 9655935601.784939
[2026-03-01 12:27:34] 2026-03-01 11:26:40,977 | INFO     | chi2: 0.10505726655194132
[2026-03-01 12:27:34] 2026-03-01 11:26:40,977 | INFO     | current memory leak: -5.45 B/s (using 191 data points, chi2=0.11)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,978 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-03-01 12:27:34] 2026-03-01 11:26:40,978 | INFO     | ..............................
[2026-03-01 12:27:34] 2026-03-01 11:26:40,978 | INFO     | . Timing measurements:
[2026-03-01 12:27:34] 2026-03-01 11:26:40,978 | INFO     | . get job = 0 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,978 | INFO     | . initial setup = 130 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,978 | INFO     | . payload setup = 145 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,979 | INFO     | . stage-in = 0 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,979 | INFO     | . payload execution = 13970 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,979 | INFO     | . stage-out = 3 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,979 | INFO     | . log creation = 0 s
[2026-03-01 12:27:34] 2026-03-01 11:26:40,979 | INFO     | ..............................
[2026-03-01 12:27:34] 2026-03-01 11:26:41,418 | INFO     | 
[2026-03-01 12:27:34] 2026-03-01 11:26:41,418 | INFO     | job summary report
[2026-03-01 12:27:34] 2026-03-01 11:26:41,418 | INFO     | --------------------------------------------------
[2026-03-01 12:27:34] 2026-03-01 11:26:41,418 | INFO     | PanDA job id: 7033009901
[2026-03-01 12:27:34] 2026-03-01 11:26:41,418 | INFO     | task id: 48843674
[2026-03-01 12:27:34] 2026-03-01 11:26:41,418 | INFO     | errors: (none)
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | pilot state: finished 
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | transexitcode: 0
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | exeerrorcode: 0
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | exeerrordiag: 
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | exitcode: 0
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | exitmsg: OK
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | cpuconsumptiontime: 51682 s
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | nevents: 400
[2026-03-01 12:27:34] 2026-03-01 11:26:41,419 | INFO     | neventsw: 0
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | pid: 2470
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | pgrp: 2470
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | corecount: 8
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | event service: False
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | sizes: {0: 2281841, 1: 2282298, 2: 2282358, 12: 2282386, 14120: 2312775, 14125: 2321801, 14126: 2321985, 14128: 2322179}
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | --------------------------------------------------
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | 
[2026-03-01 12:27:34] 2026-03-01 11:26:41,420 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-01 12:27:34] 2026-03-01 11:26:41,765 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,767 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 12:27:34] 2026-03-01 11:26:41,768 | INFO     | job 7033009901 has completed (purged errors)
[2026-03-01 12:27:34] 2026-03-01 11:26:41,768 | INFO     | overall cleanup function is called
[2026-03-01 12:27:34] 2026-03-01 11:26:42,777 | INFO     | --- collectZombieJob: --- 10, [2470]
[2026-03-01 12:27:34] 2026-03-01 11:26:42,777 | INFO     | zombie collector waiting for pid 2470
[2026-03-01 12:27:34] 2026-03-01 11:26:42,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 12:27:34] 2026-03-01 11:26:42,777 | INFO     | collected zombie processes
[2026-03-01 12:27:34] 2026-03-01 11:26:42,777 | INFO     | will attempt to kill all subprocesses of pid=2470
[2026-03-01 12:27:34] 2026-03-01 11:26:42,846 | INFO     | process IDs to be killed: [2470] (in reverse order)
[2026-03-01 12:27:34] 2026-03-01 11:26:43,438 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 12:27:34] 2026-03-01 11:26:43,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 12:27:34] 2026-03-01 11:26:43,440 | INFO     | did not find any defunct processes belonging to 2470
[2026-03-01 12:27:34] 2026-03-01 11:26:43,442 | INFO     | did not find any defunct processes belonging to 2470
[2026-03-01 12:27:34] 2026-03-01 11:26:43,443 | INFO     | ready for new job
[2026-03-01 12:27:34] 2026-03-01 11:26:43,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 12:27:34] 2026-03-01 11:26:43,445 | INFO     | **************************************
[2026-03-01 12:27:34] 2026-03-01 11:26:43,445 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 12:27:34] 2026-03-01 11:26:43,445 | INFO     | **************************************
[2026-03-01 12:27:34] 2026-03-01 11:26:43,445 | INFO     | 
[2026-03-01 12:27:34] 2026-03-01 11:26:43,446 | INFO     | pilot is running in a VM
[2026-03-01 12:27:34] 2026-03-01 11:26:43,446 | INFO     | architecture information:
[2026-03-01 12:27:34] 2026-03-01 11:26:43,453 | INFO     | executing command: cat /etc/os-release
[2026-03-01 12:27:34] 2026-03-01 11:26:43,746 | INFO     | cat /etc/os-release:
[2026-03-01 12:27:34] NAME="CentOS Linux"
[2026-03-01 12:27:34] VERSION="7 (Core)"
[2026-03-01 12:27:34] ID="centos"
[2026-03-01 12:27:34] ID_LIKE="rhel fedora"
[2026-03-01 12:27:34] VERSION_ID="7"
[2026-03-01 12:27:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 12:27:34] ANSI_COLOR="0;31"
[2026-03-01 12:27:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 12:27:34] HOME_URL="https://www.centos.org/"
[2026-03-01 12:27:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 12:27:34] 
[2026-03-01 12:27:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 12:27:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 12:27:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 12:27:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 12:27:34] 
[2026-03-01 12:27:34] 2026-03-01 11:26:43,747 | INFO     | **************************************
[2026-03-01 12:27:34] 2026-03-01 11:26:44,250 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-01 12:27:34] 2026-03-01 11:26:44,506 | INFO     | sufficient remaining disk space (496293117952 B)
[2026-03-01 12:27:34] 2026-03-01 11:26:44,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 12:27:34] 2026-03-01 11:26:44,507 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 12:27:34] 2026-03-01 11:26:44,507 | INFO     | update_server=False
[2026-03-01 12:27:34] 2026-03-01 11:26:44,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 12:27:34] 2026-03-01 11:26:44,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 12:27:34] 2026-03-01 11:26:44,560 | INFO     | all payload control threads have been joined
[2026-03-01 12:27:34] 2026-03-01 11:26:44,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 12:27:34] 2026-03-01 11:26:44,715 | INFO     | aborting loop
[2026-03-01 12:27:34] 2026-03-01 11:26:45,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 12:27:34] 2026-03-01 11:26:45,267 | INFO     | all data control threads have been joined
[2026-03-01 12:27:34] 2026-03-01 11:26:45,513 | INFO     | [job] retrieve thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:45,566 | INFO     | [payload] control thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:45,721 | INFO     | [job] job monitor thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:45,901 | INFO     | all job control threads have been joined
[2026-03-01 12:27:34] 2026-03-01 11:26:46,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 12:27:34] 2026-03-01 11:26:46,133 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,178 | INFO     | [payload] validate_post thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,273 | INFO     | [data] control thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,320 | INFO     | [payload] failed_post thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,408 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,516 | INFO     | [data] copytool_in thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,524 | INFO     | [data] copytool_out thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,642 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,758 | INFO     | [job] validate thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,906 | INFO     | [job] control thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:46,948 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:47,128 | INFO     | [job] queue monitor thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:26:49,063 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 12:27:34] 2026-03-01 11:27:13,666 | INFO     | PID=30412 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 12:27:34] 2026-03-01 11:27:13,666 | INFO     | .. there are 2 such processes running
[2026-03-01 12:27:34] 2026-03-01 11:27:13,668 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 12:27:34] 2026-03-01 11:27:13,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 12:27:34] 2026-03-01 11:27:13,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 12:27:34] 2026-03-01 11:27:24,733 | INFO     | [monitor] cgroup control has ended
[2026-03-01 12:27:34] 2026-03-01 11:27:26,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622253500224)>', '<ExcThread(monitor, started 140621381625600)>']
[2026-03-01 12:27:34] 2026-03-01 11:27:26,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 12:27:34] 2026-03-01 11:27:26,746 | INFO     | [monitor] control thread has ended
[2026-03-01 12:27:34] 2026-03-01 11:27:31,717 | INFO     | all workflow threads have been joined
[2026-03-01 12:27:34] 2026-03-01 11:27:31,717 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 12:27:34] 2026-03-01 11:27:31,717 | INFO     | traces error code: 0
[2026-03-01 12:27:34] 2026-03-01 11:27:31,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 12:27:34] 2026-03-01 11:27:32,008 [wrapper] ==== pilot stdout END ====
[2026-03-01 12:27:34] 2026-03-01 11:27:32,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 12:27:34] 2026-03-01 11:27:32,207 [wrapper] pilotpid: 30412
[2026-03-01 12:27:34] 2026-03-01 11:27:32,283 [wrapper] Pilot exit status: 0
[2026-03-01 12:27:34] 2026-03-01 11:27:32,880 [wrapper] pandaids: 7033009901
[2026-03-01 12:27:34] 2026-03-01 11:27:33,079 [wrapper] cleanup supervisor_pilot  8326 30413
[2026-03-01 12:27:34] 2026-03-01 11:27:33,083 [wrapper] Test setup, not cleaning
[2026-03-01 12:27:34] 2026-03-01 11:27:33,086 [wrapper] apfmon messages muted
[2026-03-01 12:27:34] 2026-03-01 11:27:33,112 [wrapper] ==== wrapper stdout END ====
[2026-03-01 12:27:34] 2026-03-01 11:27:33,280 [wrapper] ==== wrapper stderr END ====
[2026-03-01 12:27:34]  *** Error codes and diagnostics ***
[2026-03-01 12:27:34]     "exeErrorCode": 0,
[2026-03-01 12:27:34]     "exeErrorDiag": "",
[2026-03-01 12:27:34]     "pilotErrorCode": 0,
[2026-03-01 12:27:34]     "pilotErrorDiag": "",
[2026-03-01 12:27:34]  *** Listing of results directory ***
[2026-03-01 12:27:34] total 424404
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc    584627 Feb 28 13:40 pilot3.tar.gz
[2026-03-01 12:27:34] -rwx------. 1 boinc boinc     36322 Feb 28 13:42 runpilot2-wrapper.sh
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc      5111 Feb 28 13:43 queuedata.json
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc       100 Mar  1 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 12:27:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 08:23 run_atlas
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc       105 Mar  1 08:23 job.xml
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc      6390 Mar  1 08:23 init_data.xml
[2026-03-01 12:27:34] -rw-r--r--. 2 boinc boinc 256233626 Mar  1 08:23 EVNT.48447915._000002.pool.root.1
[2026-03-01 12:27:34] -rw-r--r--. 2 boinc boinc     15845 Mar  1 08:23 start_atlas.sh
[2026-03-01 12:27:34] drwxrwx--x. 2 boinc boinc        68 Mar  1 08:23 shared
[2026-03-01 12:27:34] -rw-r--r--. 2 boinc boinc    597967 Mar  1 08:23 input.tar.gz
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc         0 Mar  1 08:23 boinc_lockfile
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc      2602 Mar  1 08:24 pandaJob.out
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc       413 Mar  1 08:30 workernode_map.json
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc    998782 Mar  1 08:31 agis_schedconf.cvmfs.json
[2026-03-01 12:27:34] drwx------. 5 boinc boinc      4096 Mar  1 08:31 pilot3
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc 169544691 Mar  1 12:25 HITS.48843674._000040.pool.root.1
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc       530 Mar  1 12:25 boinc_task_state.xml
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc      1011 Mar  1 12:26 memory_monitor_summary.json
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc   1513015 Mar  1 12:26 agis_ddmendpoints.agis.ALL.json
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc    461459 Mar  1 12:26 log.48843674._000040.job.log.tgz.1
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc      6302 Mar  1 12:26 heartbeat.json
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc        95 Mar  1 12:27 pilot_heartbeat.json
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc      8192 Mar  1 12:27 boinc_mmap_file
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc        28 Mar  1 12:27 wrapper_checkpoint.txt
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc      4880 Mar  1 12:27 pilotlog.txt
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc   1986071 Mar  1 12:27 log.48843674._000040.job.log.1
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc       357 Mar  1 12:27 output.list
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc       620 Mar  1 12:27 runtime_log
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc   2467840 Mar  1 12:27 result.tar.gz
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc      8816 Mar  1 12:27 runtime_log.err
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc       655 Mar  1 12:27 LROODmlpYG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4Q5KDmcka2bm.diag
[2026-03-01 12:27:34] -rw-r--r--. 1 boinc boinc     20783 Mar  1 12:27 stderr.txt
[2026-03-01 12:27:34] HITS file was successfully produced:
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc 169544691 Mar  1 12:25 shared/HITS.pool.root.1
[2026-03-01 12:27:34]  *** Contents of shared directory: ***
[2026-03-01 12:27:34] total 418816
[2026-03-01 12:27:34] -rw-r--r--. 2 boinc boinc 256233626 Mar  1 08:23 ATLAS.root_0
[2026-03-01 12:27:34] -rw-r--r--. 2 boinc boinc     15845 Mar  1 08:23 start_atlas.sh
[2026-03-01 12:27:34] -rw-r--r--. 2 boinc boinc    597967 Mar  1 08:23 input.tar.gz
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc 169544691 Mar  1 12:25 HITS.pool.root.1
[2026-03-01 12:27:34] -rw-------. 1 boinc boinc   2467840 Mar  1 12:27 result.tar.gz
12:27:35 (26409): run_atlas exited; CPU time 51827.089371
12:27:35 (26409): called boinc_finish(0)

</stderr_txt>
]]>

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