Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:21:52 (3451977): wrapper (7.7.26015): starting
10:21:52 (3451977): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 10:21:52] Arguments: --nthreads 4
[2026-03-03 10:21:52] Threads: 4
[2026-03-03 10:21:52] Checking for CVMFS
[2026-03-03 10:21:52] No cvmfs_config command found, will try listing directly
[2026-03-03 10:21:52] CVMFS is ok
[2026-03-03 10:21:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 10:21:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 10:21:52] Further information can be found at the LHC@home message board.
[2026-03-03 10:21:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 10:21:52] Checking for apptainer binary...
[2026-03-03 10:21:52] which: no apptainer in ((null))
[2026-03-03 10:21:52] apptainer is not installed, using version from CVMFS
[2026-03-03 10:21:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 10:21:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-03 10:21:52] apptainer works
[2026-03-03 10:21:52] Set ATHENA_PROC_NUMBER=4
[2026-03-03 10:21:52] Set ATHENA_CORE_NUMBER=4
[2026-03-03 10:21:52] Starting ATLAS job with PandaID=7032742562
[2026-03-03 10:21:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 13:39:02]  *** The last 200 lines of the pilot log: ***
[2026-03-03 13:39:02] 2026-03-03 12:35:13,103 | INFO     | intersect: -7169301389.724403
[2026-03-03 13:39:02] 2026-03-03 12:35:13,103 | INFO     | chi2: 2.1162571845065745
[2026-03-03 13:39:02] 2026-03-03 12:35:13,104 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,105 | INFO     | sum of deviations: 20132262550.999996
[2026-03-03 13:39:02] 2026-03-03 12:35:13,105 | INFO     | mean x: 1772535377.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,105 | INFO     | mean y: 2328120.3891891893
[2026-03-03 13:39:02] 2026-03-03 12:35:13,105 | INFO     | intersect: -18174017732.08624
[2026-03-03 13:39:02] 2026-03-03 12:35:13,106 | INFO     | chi2: 1.3296438623733355
[2026-03-03 13:39:02] 2026-03-03 12:35:13,106 | INFO     | current chi2=1.3296438623733355 (change=37.17002488601807 %)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,106 | INFO     | sum of square deviations: 1808350185.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,107 | INFO     | sum of deviations: 19609331266.999992
[2026-03-03 13:39:02] 2026-03-03 12:35:13,108 | INFO     | mean x: 1772535224.5
[2026-03-03 13:39:02] 2026-03-03 12:35:13,108 | INFO     | mean y: 2327605.644444444
[2026-03-03 13:39:02] 2026-03-03 12:35:13,108 | INFO     | intersect: -19218634511.074505
[2026-03-03 13:39:02] 2026-03-03 12:35:13,108 | INFO     | chi2: 1.3305303132358532
[2026-03-03 13:39:02] 2026-03-03 12:35:13,109 | INFO     | current chi2=1.3305303132358532 (change=-0.06666829273633053 %)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,109 | INFO     | right removable region: 179
[2026-03-03 13:39:02] 2026-03-03 12:35:13,110 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,113 | INFO     | sum of deviations: -14967791674.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,113 | INFO     | mean x: 1772535682.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,114 | INFO     | mean y: 2339272.789189189
[2026-03-03 13:39:02] 2026-03-03 12:35:13,114 | INFO     | intersect: 13515962207.04852
[2026-03-03 13:39:02] 2026-03-03 12:35:13,114 | INFO     | chi2: 0.8097600175881005
[2026-03-03 13:39:02] 2026-03-03 12:35:13,114 | INFO     | current chi2=0.8097600175881005 (change=61.73621885296027 %)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,114 | INFO     | sum of square deviations: 1808350185.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,115 | INFO     | sum of deviations: -14826798134.5
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | mean x: 1772535834.5
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | mean y: 2339130.4166666665
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | intersect: 14535492732.134024
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | chi2: 0.8097723962212672
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | current chi2=0.8097723962212672 (change=-0.0015286792256786201 %)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | left removable region: 20
[2026-03-03 13:39:02] 2026-03-03 12:35:13,116 | INFO     | sum of square deviations: 1246386160.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,117 | INFO     | sum of deviations: -2399410843.9999995
[2026-03-03 13:39:02] 2026-03-03 12:35:13,117 | INFO     | mean x: 1772535804.0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,118 | INFO     | mean y: 2350089.5786163523
[2026-03-03 13:39:02] 2026-03-03 12:35:13,118 | INFO     | intersect: 3414648593.836604
[2026-03-03 13:39:02] 2026-03-03 12:35:13,118 | INFO     | chi2: 0.0019380928277978394
[2026-03-03 13:39:02] 2026-03-03 12:35:13,118 | INFO     | current memory leak: -1.93 B/s (using 159 data points, chi2=0.00)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | could have reported an average CPU frequency of 2802 MHz (10 samples)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | ..............................
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | . Timing measurements:
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | . get job = 0 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | . initial setup = 8 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | . payload setup = 9 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,119 | INFO     | . stage-in = 0 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,120 | INFO     | . payload execution = 11549 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,120 | INFO     | . stage-out = 1 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,120 | INFO     | . log creation = 0 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,120 | INFO     | ..............................
[2026-03-03 13:39:02] 2026-03-03 12:35:13,212 | INFO     | 
[2026-03-03 13:39:02] 2026-03-03 12:35:13,212 | INFO     | job summary report
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | --------------------------------------------------
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | PanDA job id: 7032742562
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | task id: 48838462
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | errors: (none)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | pilot state: finished 
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | transexitcode: 0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | exeerrorcode: 0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | exeerrordiag: 
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | exitcode: 0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | exitmsg: OK
[2026-03-03 13:39:02] 2026-03-03 12:35:13,213 | INFO     | cpuconsumptiontime: 44453 s
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | nevents: 400
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | neventsw: 0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | pid: 3522395
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | pgrp: 3522395
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | corecount: 4
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | event service: False
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | sizes: {0: 2282283, 11: 2282283, 11562: 2312230, 11564: 2326049, 11565: 2326299}
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | --------------------------------------------------
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | 
[2026-03-03 13:39:02] 2026-03-03 12:35:13,214 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-03-03 13:39:02] 2026-03-03 12:35:13,246 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,246 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | job 7032742562 has completed (purged errors)
[2026-03-03 13:39:02] 2026-03-03 12:35:13,248 | INFO     | overall cleanup function is called
[2026-03-03 13:39:02] 2026-03-03 12:35:14,257 | INFO     | --- collectZombieJob: --- 10, [3522395]
[2026-03-03 13:39:02] 2026-03-03 12:35:14,258 | INFO     | zombie collector waiting for pid 3522395
[2026-03-03 13:39:02] 2026-03-03 12:35:14,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 13:39:02] 2026-03-03 12:35:14,258 | INFO     | collected zombie processes
[2026-03-03 13:39:02] 2026-03-03 12:35:14,258 | INFO     | will attempt to kill all subprocesses of pid=3522395
[2026-03-03 13:39:02] 2026-03-03 12:35:15,042 | INFO     | process IDs to be killed: [3522395] (in reverse order)
[2026-03-03 13:39:02] 2026-03-03 12:35:15,339 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 13:39:02] 2026-03-03 12:35:15,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 13:39:02] 2026-03-03 12:35:15,372 | INFO     | did not find any defunct processes belonging to 3522395
[2026-03-03 13:39:02] 2026-03-03 12:35:15,438 | INFO     | did not find any defunct processes belonging to 3522395
[2026-03-03 13:39:02] 2026-03-03 12:35:15,438 | INFO     | ready for new job
[2026-03-03 13:39:02] 2026-03-03 12:35:15,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 13:39:02] 2026-03-03 12:35:15,441 | INFO     | **************************************
[2026-03-03 13:39:02] 2026-03-03 12:35:15,441 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 13:39:02] 2026-03-03 12:35:15,441 | INFO     | **************************************
[2026-03-03 13:39:02] 2026-03-03 12:35:15,442 | INFO     | 
[2026-03-03 13:39:02] 2026-03-03 12:35:15,455 | INFO     | architecture information:
[2026-03-03 13:39:02] 2026-03-03 12:35:15,456 | INFO     | executing command: cat /etc/os-release
[2026-03-03 13:39:02] 2026-03-03 12:35:15,482 | INFO     | cat /etc/os-release:
[2026-03-03 13:39:02] NAME="CentOS Linux"
[2026-03-03 13:39:02] VERSION="7 (Core)"
[2026-03-03 13:39:02] ID="centos"
[2026-03-03 13:39:02] ID_LIKE="rhel fedora"
[2026-03-03 13:39:02] VERSION_ID="7"
[2026-03-03 13:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 13:39:02] ANSI_COLOR="0;31"
[2026-03-03 13:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 13:39:02] HOME_URL="https://www.centos.org/"
[2026-03-03 13:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 13:39:02] 
[2026-03-03 13:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 13:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 13:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 13:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 13:39:02] 
[2026-03-03 13:39:02] 2026-03-03 12:35:15,483 | INFO     | **************************************
[2026-03-03 13:39:02] 2026-03-03 12:35:15,986 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-03 13:39:02] 2026-03-03 12:35:16,011 | INFO     | sufficient remaining disk space (3327183028224 B)
[2026-03-03 13:39:02] 2026-03-03 12:35:16,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 13:39:02] 2026-03-03 12:35:16,012 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 13:39:02] 2026-03-03 12:35:16,012 | INFO     | update_server=False
[2026-03-03 13:39:02] 2026-03-03 12:35:16,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 13:39:02] 2026-03-03 12:35:16,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 13:39:02] 2026-03-03 12:35:16,053 | INFO     | all data control threads have been joined
[2026-03-03 13:39:02] 2026-03-03 12:35:16,192 | WARNING  | process 3522395 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 13:39:02] 2026-03-03 12:35:16,246 | INFO     | all job control threads have been joined
[2026-03-03 13:39:02] 2026-03-03 12:35:16,410 | INFO     | all payload control threads have been joined
[2026-03-03 13:39:02] 2026-03-03 12:35:16,723 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:39:02] 2026-03-03 12:35:16,724 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:39:02] 2026-03-03 12:35:16,724 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 13:39:02] 2026-03-03 12:35:16,724 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 13:39:02] 2026-03-03 12:35:16,725 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7032742562/payload.stdout) since it has not been created yet
[2026-03-03 13:39:02] 2026-03-03 12:35:16,725 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-03 13:39:02] 2026-03-03 12:35:16,746 | INFO     | sufficient remaining disk space (3327183028224 B)
[2026-03-03 13:39:02] 2026-03-03 12:35:16,746 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 13:39:02] 2026-03-03 12:35:16,747 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7032742562/HITS.48838462._002516.pool.root.1 since it does not exist
[2026-03-03 13:39:02] 2026-03-03 12:35:17,017 | INFO     | [job] retrieve thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:17,058 | INFO     | [data] control thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:17,217 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:17,251 | INFO     | [job] control thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:17,416 | INFO     | [payload] control thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:17,426 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:17,504 | INFO     | number of running child processes to parent process 3522395: 1
[2026-03-03 13:39:02] 2026-03-03 12:35:17,504 | INFO     | maximum number of monitored processes: 6
[2026-03-03 13:39:02] 2026-03-03 12:35:17,505 | INFO     | aborting job monitoring since job object (job id=7032742562) has expired
[2026-03-03 13:39:02] 2026-03-03 12:35:17,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:39:02] 2026-03-03 12:35:17,505 | INFO     | will abort loop
[2026-03-03 13:39:02] 2026-03-03 12:35:17,919 | INFO     | [payload] validate_post thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:18,011 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:18,017 | INFO     | [data] copytool_out thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:18,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:39:02] 2026-03-03 12:35:18,407 | INFO     | [data] copytool_in thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:18,414 | INFO     | [job] validate thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:18,446 | INFO     | [payload] failed_post thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:18,509 | INFO     | [job] job monitor thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:19,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 13:39:02] 2026-03-03 12:35:19,227 | INFO     | [job] queue monitor thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:23,076 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:26,786 | INFO     | job.realtimelogging is not enabled
[2026-03-03 13:39:02] 2026-03-03 12:35:27,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 13:39:02] 2026-03-03 12:35:35,297 | INFO     | [monitor] cgroup control has ended
[2026-03-03 13:39:02] 2026-03-03 12:35:35,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22684288292672)>', '<ExcThread(monitor, started 22684049356544)>']
[2026-03-03 13:39:02] 2026-03-03 12:35:40,943 | INFO     | all workflow threads have been joined
[2026-03-03 13:39:02] 2026-03-03 12:35:40,944 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 13:39:02] 2026-03-03 12:35:40,944 | INFO     | traces error code: 0
[2026-03-03 13:39:02] 2026-03-03 12:35:40,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 13:39:02] 2026-03-03 12:35:47,053 | INFO     | PID=3478317 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 13:39:02] 2026-03-03 12:35:47,053 | INFO     | .. there are 17 such processes running
[2026-03-03 13:39:02] 2026-03-03 12:35:47,054 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 13:39:02] 2026-03-03 12:35:47,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 13:39:02] 2026-03-03 12:35:47,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 13:39:02] 2026-03-03 12:35:47,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 13:39:02] 2026-03-03 12:35:47,054 | CRITICAL | thread 'MainThread' is not alive
[2026-03-03 13:39:02] 2026-03-03 12:35:47,054 | INFO     | [monitor] control thread has ended
[2026-03-03 13:39:02] 2026-03-03 12:35:47,186 [wrapper] ==== pilot stdout END ====
[2026-03-03 13:39:02] 2026-03-03 12:35:47,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 13:39:02] 2026-03-03 12:35:47,198 [wrapper] pilotpid: 3478317
[2026-03-03 13:39:02] 2026-03-03 12:35:47,201 [wrapper] Pilot exit status: 0
[2026-03-03 13:39:02] 2026-03-03 12:35:47,216 [wrapper] pandaids: 7032742562
[2026-03-03 13:39:02] 2026-03-03 12:35:47,409 [wrapper] cleanup supervisor_pilot 3830878 3478320
[2026-03-03 13:39:02] 2026-03-03 12:35:47,414 [wrapper] Test setup, not cleaning
[2026-03-03 13:39:02] 2026-03-03 12:35:47,418 [wrapper] apfmon messages muted
[2026-03-03 13:39:02] 2026-03-03 12:35:47,422 [wrapper] ==== wrapper stdout END ====
[2026-03-03 13:39:02] 2026-03-03 12:35:47,426 [wrapper] ==== wrapper stderr END ====
[2026-03-03 13:39:02]  *** Error codes and diagnostics ***
[2026-03-03 13:39:02]     "exeErrorCode": 0,
[2026-03-03 13:39:02]     "exeErrorDiag": "",
[2026-03-03 13:39:02]     "pilotErrorCode": 0,
[2026-03-03 13:39:02]     "pilotErrorDiag": "",
[2026-03-03 13:39:02]  *** Listing of results directory ***
[2026-03-03 13:39:02] total 480800
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc      5111 Feb 28 09:11 queuedata.json
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc    584627 Feb 28 09:11 pilot3.tar.gz
[2026-03-03 13:39:02] -rwx------ 1 boinc boinc     36322 Feb 28 09:11 runpilot2-wrapper.sh
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc       100 Mar  3 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 13:39:02] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 10:21 run_atlas
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc       105 Mar  3 10:21 job.xml
[2026-03-03 13:39:02] -rw-r--r-- 2 boinc boinc 275391973 Mar  3 10:21 EVNT.48220133._000099.pool.root.1
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc      6697 Mar  3 10:21 init_data.xml
[2026-03-03 13:39:02] -rw-r--r-- 2 boinc boinc     15845 Mar  3 10:21 start_atlas.sh
[2026-03-03 13:39:02] drwxrwx--x 2 boinc boinc      4096 Mar  3 10:21 shared
[2026-03-03 13:39:02] -rw-r--r-- 2 boinc boinc    597971 Mar  3 10:21 input.tar.gz
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc         0 Mar  3 10:21 boinc_lockfile
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc      2561 Mar  3 10:21 pandaJob.out
[2026-03-03 13:39:02] -rw------- 1 boinc boinc    998412 Mar  3 10:22 agis_schedconf.cvmfs.json
[2026-03-03 13:39:02] -rw------- 1 boinc boinc       443 Mar  3 10:22 workernode_map.json
[2026-03-03 13:39:02] drwx------ 5 boinc boinc      4096 Mar  3 10:22 pilot3
[2026-03-03 13:39:02] -rw------- 1 boinc boinc 209057041 Mar  3 13:34 HITS.48838462._002516.pool.root.1
[2026-03-03 13:39:02] -rw-r--r-- 1 boinc boinc       529 Mar  3 13:35 boinc_task_state.xml
[2026-03-03 13:39:02] -rw------- 1 boinc boinc      1025 Mar  3 13:35 memory_monitor_summary.json
[2026-03-03 13:39:02] -rw------- 1 boinc boinc   1516104 Mar  3 13:35 agis_ddmendpoints.agis.ALL.json
[2026-03-03 13:39:02] -rw------- 1 boinc boinc    367472 Mar  3 13:35 log.48838462._002516.job.log.tgz.1
[2026-03-03 13:39:02] -rw------- 1 boinc boinc      6359 Mar  3 13:35 heartbeat.json
[2026-03-03 13:39:02] -rw------- 1 boinc boinc        95 Mar  3 13:35 pilot_heartbeat.json
[2026-03-03 13:39:02] -rw------- 1 boinc boinc       894 Mar  3 13:35 pilotlog.txt
[2026-03-03 13:39:02] -rw------- 1 boinc boinc   1610995 Mar  3 13:35 log.48838462._002516.job.log.1
[2026-03-03 13:39:02] -rw------- 1 boinc boinc       357 Mar  3 13:35 output.list
[2026-03-03 13:39:03] -rw-r--r-- 1 boinc boinc       620 Mar  3 13:35 runtime_log
[2026-03-03 13:39:03] -rw------- 1 boinc boinc   1996800 Mar  3 13:35 result.tar.gz
[2026-03-03 13:39:03] -rw------- 1 boinc boinc       666 Mar  3 13:35 DUUMDmSbUG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhv4KDmUJ9D6m.diag
[2026-03-03 13:39:03] -rw-r--r-- 1 boinc boinc      9205 Mar  3 13:35 runtime_log.err
[2026-03-03 13:39:03] -rw-r--r-- 1 boinc boinc        26 Mar  3 13:38 wrapper_checkpoint.txt
[2026-03-03 13:39:03] -rw-r--r-- 1 boinc boinc      8192 Mar  3 13:39 boinc_mmap_file
[2026-03-03 13:39:03] -rw-r--r-- 1 boinc boinc     21275 Mar  3 13:39 stderr.txt
[2026-03-03 13:39:03] HITS file was successfully produced:
[2026-03-03 13:39:03] -rw------- 1 boinc boinc 209057041 Mar  3 13:34 shared/HITS.pool.root.1
[2026-03-03 13:39:03]  *** Contents of shared directory: ***
[2026-03-03 13:39:03] total 475660
[2026-03-03 13:39:03] -rw-r--r-- 2 boinc boinc 275391973 Mar  3 10:21 ATLAS.root_0
[2026-03-03 13:39:03] -rw-r--r-- 2 boinc boinc     15845 Mar  3 10:21 start_atlas.sh
[2026-03-03 13:39:03] -rw-r--r-- 2 boinc boinc    597971 Mar  3 10:21 input.tar.gz
[2026-03-03 13:39:03] -rw------- 1 boinc boinc 209057041 Mar  3 13:34 HITS.pool.root.1
[2026-03-03 13:39:03] -rw------- 1 boinc boinc   1996800 Mar  3 13:35 result.tar.gz
13:39:04 (3451977): run_atlas exited; CPU time 45185.451155
13:39:04 (3451977): called boinc_finish(0)

</stderr_txt>
]]>

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