Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:00 (3483759): wrapper (7.7.26015): starting
00:25:00 (3483759): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 00:25:00] Arguments: --nthreads 4
[2026-03-02 00:25:00] Threads: 4
[2026-03-02 00:25:00] Checking for CVMFS
[2026-03-02 00:25:00] No cvmfs_config command found, will try listing directly
[2026-03-02 00:25:00] CVMFS is ok
[2026-03-02 00:25:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 00:25:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 00:25:00] Further information can be found at the LHC@home message board.
[2026-03-02 00:25:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 00:25:00] Checking for apptainer binary...
[2026-03-02 00:25:00] which: no apptainer in ((null))
[2026-03-02 00:25:00] apptainer is not installed, using version from CVMFS
[2026-03-02 00:25:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 00:25:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-02 00:25:00] apptainer works
[2026-03-02 00:25:00] Set ATHENA_PROC_NUMBER=4
[2026-03-02 00:25:00] Set ATHENA_CORE_NUMBER=4
[2026-03-02 00:25:00] Starting ATLAS job with PandaID=7032737823
[2026-03-02 00:25:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 04:41:10]  *** The last 200 lines of the pilot log: ***
[2026-03-02 04:41:10] 2026-03-02 03:21:52,406 | INFO     | preparing for final server update for job 7032737823 in state='finished'
[2026-03-02 04:41:10] 2026-03-02 03:21:52,406 | INFO     | reading metadata from: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7032737823/jobReport.json
[2026-03-02 04:41:10] 2026-03-02 03:21:52,409 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot96/slots/0/workernode_map.json
[2026-03-02 04:41:10] 2026-03-02 03:21:52,409 | INFO     | this job has now completed (state=finished)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,409 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,410 | INFO     | log transfer has been attempted: DONE
[2026-03-02 04:41:10] 2026-03-02 03:21:52,410 | INFO     | job 7032737823 has finished - writing final server update
[2026-03-02 04:41:10] 2026-03-02 03:21:52,410 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2268112/.job.ad'
[2026-03-02 04:41:10] 2026-03-02 03:21:52,410 | INFO     | total number of processed events: 400 (read)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,436 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7032737823/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,436 | INFO     | extracted standard info from prmon json
[2026-03-02 04:41:10] 2026-03-02 03:21:52,436 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 04:41:10] 2026-03-02 03:21:52,436 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 04:41:10] 2026-03-02 03:21:52,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 04:41:10] 2026-03-02 03:21:52,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 04:41:10] 2026-03-02 03:21:52,442 | INFO     | fitting pss+swap vs Time
[2026-03-02 04:41:10] 2026-03-02 03:21:52,442 | INFO     | sum of square deviations: 3871990738.0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,444 | INFO     | sum of deviations: 13419226672.500002
[2026-03-02 04:41:10] 2026-03-02 03:21:52,445 | INFO     | mean x: 1772414597.5
[2026-03-02 04:41:10] 2026-03-02 03:21:52,445 | INFO     | mean y: 2354286.2112068967
[2026-03-02 04:41:10] 2026-03-02 03:21:52,445 | INFO     | intersect: -6140334281.733492
[2026-03-02 04:41:10] 2026-03-02 03:21:52,445 | INFO     | chi2: 1.3592982245046166
[2026-03-02 04:41:10] 2026-03-02 03:21:52,446 | INFO     | sum of square deviations: 3627000098.0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,447 | INFO     | sum of deviations: 13241714079.999998
[2026-03-02 04:41:10] 2026-03-02 03:21:52,447 | INFO     | mean x: 1772414445.0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,447 | INFO     | mean y: 2354175.991189427
[2026-03-02 04:41:10] 2026-03-02 03:21:52,448 | INFO     | intersect: -6468504571.681191
[2026-03-02 04:41:10] 2026-03-02 03:21:52,448 | INFO     | chi2: 1.3599012259044454
[2026-03-02 04:41:10] 2026-03-02 03:21:52,448 | INFO     | current chi2=1.3599012259044454 (change=-0.04436122912237209 %)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,448 | INFO     | right removable region: 226
[2026-03-02 04:41:10] 2026-03-02 03:21:52,448 | INFO     | sum of square deviations: 3627000098.0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,450 | INFO     | sum of deviations: -16290481696.999998
[2026-03-02 04:41:10] 2026-03-02 03:21:52,450 | INFO     | mean x: 1772414750.0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,450 | INFO     | mean y: 2372571.823788546
[2026-03-02 04:41:10] 2026-03-02 03:21:52,450 | INFO     | intersect: 7963080943.541022
[2026-03-02 04:41:10] 2026-03-02 03:21:52,453 | INFO     | chi2: 0.032228857758674415
[2026-03-02 04:41:10] 2026-03-02 03:21:52,454 | INFO     | current chi2=0.032228857758674415 (change=97.62900758805743 %)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,454 | INFO     | sum of square deviations: 3392567795.5
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | sum of deviations: -16460785492.499998
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | mean x: 1772414902.5
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | mean y: 2372669.1846846845
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | intersect: 8602154095.059744
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | chi2: 0.027951853906806583
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | current chi2=0.027951853906806583 (change=13.270727383184013 %)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,456 | INFO     | left removable region: 20
[2026-03-02 04:41:10] 2026-03-02 03:21:52,457 | INFO     | sum of square deviations: 2710627567.5
[2026-03-02 04:41:10] 2026-03-02 03:21:52,458 | INFO     | sum of deviations: -12304400951.0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,458 | INFO     | mean x: 1772415024.5
[2026-03-02 04:41:10] 2026-03-02 03:21:52,458 | INFO     | mean y: 2370358.631067961
[2026-03-02 04:41:10] 2026-03-02 03:21:52,458 | INFO     | intersect: 8047926072.187976
[2026-03-02 04:41:10] 2026-03-02 03:21:52,459 | INFO     | chi2: 0.026109085549503197
[2026-03-02 04:41:10] 2026-03-02 03:21:52,459 | INFO     | current memory leak: -4.54 B/s (using 206 data points, chi2=0.03)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,460 | INFO     | could have reported an average CPU frequency of 2760 MHz (11 samples)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,460 | INFO     | ..............................
[2026-03-02 04:41:10] 2026-03-02 03:21:52,460 | INFO     | . Timing measurements:
[2026-03-02 04:41:10] 2026-03-02 03:21:52,460 | INFO     | . get job = 0 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,460 | INFO     | . initial setup = 9 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,461 | INFO     | . payload setup = 9 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,461 | INFO     | . stage-in = 0 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,461 | INFO     | . payload execution = 14155 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,461 | INFO     | . stage-out = 1 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,461 | INFO     | . log creation = 0 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,461 | INFO     | ..............................
[2026-03-02 04:41:10] 2026-03-02 03:21:52,559 | INFO     | 
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | job summary report
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | --------------------------------------------------
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | PanDA job id: 7032737823
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | task id: 48843692
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | errors: (none)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | pilot state: finished 
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | transexitcode: 0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | exeerrorcode: 0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | exeerrordiag: 
[2026-03-02 04:41:10] 2026-03-02 03:21:52,560 | INFO     | exitcode: 0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | exitmsg: OK
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | cpuconsumptiontime: 55031 s
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | nevents: 400
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | neventsw: 0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | pid: 3521298
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | pgrp: 3521298
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | corecount: 4
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | event service: False
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | sizes: {0: 2281928, 1: 2282389, 12: 2282389, 14168: 2313514, 14169: 2313513, 14171: 2322589, 14174: 2322773, 14177: 2322967}
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | --------------------------------------------------
[2026-03-02 04:41:10] 2026-03-02 03:21:52,561 | INFO     | 
[2026-03-02 04:41:10] 2026-03-02 03:21:52,562 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-03-02 04:41:10] 2026-03-02 03:21:52,592 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,592 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 04:41:10] 2026-03-02 03:21:52,594 | INFO     | job 7032737823 has completed (purged errors)
[2026-03-02 04:41:10] 2026-03-02 03:21:52,595 | INFO     | overall cleanup function is called
[2026-03-02 04:41:10] 2026-03-02 03:21:53,603 | INFO     | --- collectZombieJob: --- 10, [3521298]
[2026-03-02 04:41:10] 2026-03-02 03:21:53,603 | INFO     | zombie collector waiting for pid 3521298
[2026-03-02 04:41:10] 2026-03-02 03:21:53,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 04:41:10] 2026-03-02 03:21:53,603 | INFO     | collected zombie processes
[2026-03-02 04:41:10] 2026-03-02 03:21:53,603 | INFO     | will attempt to kill all subprocesses of pid=3521298
[2026-03-02 04:41:10] 2026-03-02 03:21:54,440 | INFO     | process IDs to be killed: [3521298] (in reverse order)
[2026-03-02 04:41:10] 2026-03-02 03:21:54,743 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 04:41:10] 2026-03-02 03:21:54,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 04:41:10] 2026-03-02 03:21:54,777 | INFO     | did not find any defunct processes belonging to 3521298
[2026-03-02 04:41:10] 2026-03-02 03:21:54,810 | INFO     | did not find any defunct processes belonging to 3521298
[2026-03-02 04:41:10] 2026-03-02 03:21:54,810 | INFO     | ready for new job
[2026-03-02 04:41:10] 2026-03-02 03:21:54,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 04:41:10] 2026-03-02 03:21:54,813 | INFO     | **************************************
[2026-03-02 04:41:10] 2026-03-02 03:21:54,813 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 04:41:10] 2026-03-02 03:21:54,813 | INFO     | **************************************
[2026-03-02 04:41:10] 2026-03-02 03:21:54,813 | INFO     | 
[2026-03-02 04:41:10] 2026-03-02 03:21:54,822 | INFO     | architecture information:
[2026-03-02 04:41:10] 2026-03-02 03:21:54,822 | INFO     | executing command: cat /etc/os-release
[2026-03-02 04:41:10] 2026-03-02 03:21:54,844 | INFO     | cat /etc/os-release:
[2026-03-02 04:41:10] NAME="CentOS Linux"
[2026-03-02 04:41:10] VERSION="7 (Core)"
[2026-03-02 04:41:10] ID="centos"
[2026-03-02 04:41:10] ID_LIKE="rhel fedora"
[2026-03-02 04:41:10] VERSION_ID="7"
[2026-03-02 04:41:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 04:41:10] ANSI_COLOR="0;31"
[2026-03-02 04:41:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 04:41:10] HOME_URL="https://www.centos.org/"
[2026-03-02 04:41:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 04:41:10] 
[2026-03-02 04:41:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 04:41:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 04:41:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 04:41:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 04:41:10] 
[2026-03-02 04:41:10] 2026-03-02 03:21:54,844 | INFO     | **************************************
[2026-03-02 04:41:10] 2026-03-02 03:21:55,347 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-03-02 04:41:10] 2026-03-02 03:21:55,372 | INFO     | sufficient remaining disk space (3271901052928 B)
[2026-03-02 04:41:10] 2026-03-02 03:21:55,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 04:41:10] 2026-03-02 03:21:55,373 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 04:41:10] 2026-03-02 03:21:55,373 | INFO     | update_server=False
[2026-03-02 04:41:10] 2026-03-02 03:21:55,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 04:41:10] 2026-03-02 03:21:55,408 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 04:41:10] 2026-03-02 03:21:55,408 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 04:41:10] 2026-03-02 03:21:55,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 04:41:10] 2026-03-02 03:21:55,408 | INFO     | will abort loop
[2026-03-02 04:41:10] 2026-03-02 03:21:55,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 04:41:10] 2026-03-02 03:21:55,856 | INFO     | all data control threads have been joined
[2026-03-02 04:41:10] 2026-03-02 03:21:55,949 | INFO     | all payload control threads have been joined
[2026-03-02 04:41:10] 2026-03-02 03:21:56,378 | INFO     | [job] retrieve thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:56,413 | INFO     | [job] job monitor thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:56,775 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:56,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 04:41:10] 2026-03-02 03:21:56,841 | INFO     | all job control threads have been joined
[2026-03-02 04:41:10] 2026-03-02 03:21:56,861 | INFO     | [data] control thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:56,951 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:56,954 | INFO     | [payload] control thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:56,993 | INFO     | [payload] failed_post thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:57,066 | INFO     | [data] copytool_in thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:57,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 04:41:10] 2026-03-02 03:21:57,655 | INFO     | [payload] validate_post thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:57,752 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:57,792 | INFO     | [job] validate thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:57,825 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:57,846 | INFO     | [job] control thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:58,571 | INFO     | [job] queue monitor thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:58,826 | INFO     | [data] copytool_out thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:21:59,485 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 04:41:10] 2026-03-02 03:22:24,800 | INFO     | PID=3498242 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-02 04:41:10] 2026-03-02 03:22:24,800 | INFO     | .. there are 8 such processes running
[2026-03-02 04:41:10] 2026-03-02 03:22:24,801 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 04:41:10] 2026-03-02 03:22:24,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 04:41:10] 2026-03-02 03:22:24,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 04:41:10] 2026-03-02 03:22:46,428 | INFO     | [monitor] cgroup control has ended
[2026-03-02 04:41:10] 2026-03-02 03:22:48,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23220085983040)>', '<ExcThread(monitor, started 23219833915136)>']
[2026-03-02 04:41:10] 2026-03-02 03:22:48,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 04:41:10] 2026-03-02 03:22:48,919 | INFO     | [monitor] control thread has ended
[2026-03-02 04:41:10] 2026-03-02 03:22:53,161 | INFO     | all workflow threads have been joined
[2026-03-02 04:41:10] 2026-03-02 03:22:53,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 04:41:10] 2026-03-02 03:22:53,164 | INFO     | traces error code: 0
[2026-03-02 04:41:10] 2026-03-02 03:22:53,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 04:41:10] 2026-03-02 03:22:53,316 [wrapper] ==== pilot stdout END ====
[2026-03-02 04:41:10] 2026-03-02 03:22:53,320 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 04:41:10] 2026-03-02 03:22:53,324 [wrapper] pilotpid: 3498242
[2026-03-02 04:41:10] 2026-03-02 03:22:53,327 [wrapper] Pilot exit status: 0
[2026-03-02 04:41:10] 2026-03-02 03:22:53,342 [wrapper] pandaids: 7032737823
[2026-03-02 04:41:10] 2026-03-02 03:22:53,562 [wrapper] cleanup supervisor_pilot 3726685 3498243
[2026-03-02 04:41:10] 2026-03-02 03:22:53,566 [wrapper] Test setup, not cleaning
[2026-03-02 04:41:10] 2026-03-02 03:22:53,569 [wrapper] apfmon messages muted
[2026-03-02 04:41:10] 2026-03-02 03:22:53,572 [wrapper] ==== wrapper stdout END ====
[2026-03-02 04:41:10] 2026-03-02 03:22:53,576 [wrapper] ==== wrapper stderr END ====
[2026-03-02 04:41:10]  *** Error codes and diagnostics ***
[2026-03-02 04:41:10]     "exeErrorCode": 0,
[2026-03-02 04:41:10]     "exeErrorDiag": "",
[2026-03-02 04:41:10]     "pilotErrorCode": 0,
[2026-03-02 04:41:10]     "pilotErrorDiag": "",
[2026-03-02 04:41:10]  *** Listing of results directory ***
[2026-03-02 04:41:10] total 481948
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc    584627 Feb 28 06:38 pilot3.tar.gz
[2026-03-02 04:41:10] -rwx------ 1 boinc boinc     36322 Feb 28 06:42 runpilot2-wrapper.sh
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc      5111 Feb 28 06:44 queuedata.json
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc       100 Mar  2 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 04:41:10] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 00:24 run_atlas
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc       105 Mar  2 00:24 job.xml
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc      6699 Mar  2 00:25 init_data.xml
[2026-03-02 04:41:10] -rw-r--r-- 2 boinc boinc 265818847 Mar  2 00:25 EVNT.48451564._000002.pool.root.1
[2026-03-02 04:41:10] -rw-r--r-- 2 boinc boinc     15845 Mar  2 00:25 start_atlas.sh
[2026-03-02 04:41:10] drwxrwx--x 2 boinc boinc      4096 Mar  2 00:25 shared
[2026-03-02 04:41:10] -rw-r--r-- 2 boinc boinc    597986 Mar  2 00:25 input.tar.gz
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc         0 Mar  2 00:25 boinc_lockfile
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc      2624 Mar  2 00:25 pandaJob.out
[2026-03-02 04:41:10] -rw------- 1 boinc boinc    998184 Mar  2 00:25 agis_schedconf.cvmfs.json
[2026-03-02 04:41:10] -rw------- 1 boinc boinc       442 Mar  2 00:25 workernode_map.json
[2026-03-02 04:41:10] drwx------ 5 boinc boinc      4096 Mar  2 00:25 pilot3
[2026-03-02 04:41:10] -rw------- 1 boinc boinc 219093431 Mar  2 04:21 HITS.48843692._000033.pool.root.1
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc       528 Mar  2 04:21 boinc_task_state.xml
[2026-03-02 04:41:10] -rw------- 1 boinc boinc      1029 Mar  2 04:21 memory_monitor_summary.json
[2026-03-02 04:41:10] -rw------- 1 boinc boinc   1513015 Mar  2 04:21 agis_ddmendpoints.agis.ALL.json
[2026-03-02 04:41:10] -rw------- 1 boinc boinc    393388 Mar  2 04:21 log.48843692._000033.job.log.tgz.1
[2026-03-02 04:41:10] -rw------- 1 boinc boinc      6342 Mar  2 04:21 heartbeat.json
[2026-03-02 04:41:10] -rw------- 1 boinc boinc        95 Mar  2 04:22 pilot_heartbeat.json
[2026-03-02 04:41:10] -rw------- 1 boinc boinc      5017 Mar  2 04:22 pilotlog.txt
[2026-03-02 04:41:10] -rw------- 1 boinc boinc   1941077 Mar  2 04:22 log.48843692._000033.job.log.1
[2026-03-02 04:41:10] -rw------- 1 boinc boinc       357 Mar  2 04:22 output.list
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc       620 Mar  2 04:22 runtime_log
[2026-03-02 04:41:10] -rw------- 1 boinc boinc   2355200 Mar  2 04:22 result.tar.gz
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc      9205 Mar  2 04:22 runtime_log.err
[2026-03-02 04:41:10] -rw------- 1 boinc boinc       666 Mar  2 04:22 GYbLDm2GSG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsq4KDmNUHmwm.diag
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc        26 Mar  2 04:41 wrapper_checkpoint.txt
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc      8192 Mar  2 04:41 boinc_mmap_file
[2026-03-02 04:41:10] -rw-r--r-- 1 boinc boinc     21181 Mar  2 04:41 stderr.txt
[2026-03-02 04:41:10] HITS file was successfully produced:
[2026-03-02 04:41:10] -rw------- 1 boinc boinc 219093431 Mar  2 04:21 shared/HITS.pool.root.1
[2026-03-02 04:41:10]  *** Contents of shared directory: ***
[2026-03-02 04:41:10] total 476460
[2026-03-02 04:41:10] -rw-r--r-- 2 boinc boinc 265818847 Mar  2 00:25 ATLAS.root_0
[2026-03-02 04:41:10] -rw-r--r-- 2 boinc boinc     15845 Mar  2 00:25 start_atlas.sh
[2026-03-02 04:41:10] -rw-r--r-- 2 boinc boinc    597986 Mar  2 00:25 input.tar.gz
[2026-03-02 04:41:10] -rw------- 1 boinc boinc 219093431 Mar  2 04:21 HITS.pool.root.1
[2026-03-02 04:41:10] -rw------- 1 boinc boinc   2355200 Mar  2 04:22 result.tar.gz
04:41:11 (3483759): run_atlas exited; CPU time 56132.273518
04:41:11 (3483759): called boinc_finish(0)

</stderr_txt>
]]>

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