Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:27:32 (15986): wrapper (7.7.26015): starting
21:27:32 (15986): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 21:27:32] Arguments: --nthreads 8
[2026-02-28 21:27:32] Threads: 8
[2026-02-28 21:27:32] Checking for CVMFS
[2026-02-28 21:27:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 21:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 21:27:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 21:27:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 21:27:36] 2.11.2.0 7648 107876 133576 156744 0 53 18383823 25165824 899 130560 157 38472447 99.840 23744789 831 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-28 21:27:36] CVMFS is ok
[2026-02-28 21:27:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 21:27:36] Checking for apptainer binary...
[2026-02-28 21:27:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 21:27:36] Running /usr/bin/apptainer --version
[2026-02-28 21:27:36] apptainer version 1.3.2-1.el7
[2026-02-28 21:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 21:28:00] cg-vwn480.simple-grid.lan
[2026-02-28 21:28:00] apptainer works
[2026-02-28 21:28:00] Set ATHENA_PROC_NUMBER=8
[2026-02-28 21:28:00] Set ATHENA_CORE_NUMBER=8
[2026-02-28 21:28:00] Starting ATLAS job with PandaID=7032738298
[2026-02-28 21:28:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 03:47:03]  *** The last 200 lines of the pilot log: ***
[2026-03-01 03:47:03] 2026-03-01 02:45:53,954 | INFO     | total number of processed events: 400 (read)
[2026-03-01 03:47:03] 2026-03-01 02:45:53,956 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7032738298/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 03:47:03] 2026-03-01 02:45:53,956 | INFO     | extracted standard info from prmon json
[2026-03-01 03:47:03] 2026-03-01 02:45:53,956 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 03:47:03] 2026-03-01 02:45:53,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 03:47:03] 2026-03-01 02:45:53,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 03:47:03] 2026-03-01 02:45:53,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 03:47:03] 2026-03-01 02:45:53,964 | INFO     | fitting pss+swap vs Time
[2026-03-01 03:47:03] 2026-03-01 02:45:53,965 | INFO     | sum of square deviations: 14588031660.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,969 | INFO     | sum of deviations: 184032738418.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,969 | INFO     | mean x: 1772322122.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,969 | INFO     | mean y: 2485680.185595568
[2026-03-01 03:47:03] 2026-03-01 02:45:53,969 | INFO     | intersect: -22355931210.613823
[2026-03-01 03:47:03] 2026-03-01 02:45:53,974 | INFO     | chi2: 8.569012829899767
[2026-03-01 03:47:03] 2026-03-01 02:45:53,975 | INFO     | sum of square deviations: 13990234405.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,979 | INFO     | sum of deviations: 205504640696.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,979 | INFO     | mean x: 1772321969.5
[2026-03-01 03:47:03] 2026-03-01 02:45:53,979 | INFO     | mean y: 2491088.202247191
[2026-03-01 03:47:03] 2026-03-01 02:45:53,979 | INFO     | intersect: -26031410774.76833
[2026-03-01 03:47:03] 2026-03-01 02:45:53,980 | INFO     | chi2: 7.85313325387886
[2026-03-01 03:47:03] 2026-03-01 02:45:53,980 | INFO     | current chi2=7.85313325387886 (change=8.354282928868964 %)
[2026-03-01 03:47:03] 2026-03-01 02:45:53,980 | INFO     | right removable region: 355
[2026-03-01 03:47:03] 2026-03-01 02:45:53,980 | INFO     | sum of square deviations: 13990234405.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,984 | INFO     | sum of deviations: 55204884557.500015
[2026-03-01 03:47:03] 2026-03-01 02:45:53,985 | INFO     | mean x: 1772322274.5
[2026-03-01 03:47:03] 2026-03-01 02:45:53,985 | INFO     | mean y: 2518530.761235955
[2026-03-01 03:47:03] 2026-03-01 02:45:53,985 | INFO     | intersect: -6990991637.123499
[2026-03-01 03:47:03] 2026-03-01 02:45:53,985 | INFO     | chi2: 3.664511051087027
[2026-03-01 03:47:03] 2026-03-01 02:45:53,985 | INFO     | current chi2=3.664511051087027 (change=57.235318421971705 %)
[2026-03-01 03:47:03] 2026-03-01 02:45:53,986 | INFO     | sum of square deviations: 13408995600.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,990 | INFO     | sum of deviations: -41604377353.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,990 | INFO     | mean x: 1772322427.0
[2026-03-01 03:47:03] 2026-03-01 02:45:53,990 | INFO     | mean y: 2543902.376068376
[2026-03-01 03:47:03] 2026-03-01 02:45:53,990 | INFO     | intersect: 5501566591.5991745
[2026-03-01 03:47:03] 2026-03-01 02:45:53,991 | INFO     | chi2: 1.0095449888486212
[2026-03-01 03:47:03] 2026-03-01 02:45:53,991 | INFO     | current chi2=1.0095449888486212 (change=72.45075878406332 %)
[2026-03-01 03:47:03] 2026-03-01 02:45:53,991 | INFO     | sum of square deviations: 12844082682.5
[2026-03-01 03:47:03] 2026-03-01 02:45:53,995 | INFO     | sum of deviations: -55741139095.49999
[2026-03-01 03:47:03] 2026-03-01 02:45:53,995 | INFO     | mean x: 1772322579.5
[2026-03-01 03:47:03] 2026-03-01 02:45:54,001 | INFO     | mean y: 2547700.3554913295
[2026-03-01 03:47:03] 2026-03-01 02:45:54,001 | INFO     | intersect: 7694126917.655882
[2026-03-01 03:47:03] 2026-03-01 02:45:54,001 | INFO     | chi2: 0.9195586426311162
[2026-03-01 03:47:03] 2026-03-01 02:45:54,002 | INFO     | current chi2=0.9195586426311162 (change=8.913554840199225 %)
[2026-03-01 03:47:03] 2026-03-01 02:45:54,002 | INFO     | left removable region: 30
[2026-03-01 03:47:03] 2026-03-01 02:45:54,002 | INFO     | sum of square deviations: 10644478650.0
[2026-03-01 03:47:03] 2026-03-01 02:45:54,005 | INFO     | sum of deviations: -4769001228.000002
[2026-03-01 03:47:03] 2026-03-01 02:45:54,006 | INFO     | mean x: 1772322854.0
[2026-03-01 03:47:03] 2026-03-01 02:45:54,006 | INFO     | mean y: 2546182.486153846
[2026-03-01 03:47:03] 2026-03-01 02:45:54,006 | INFO     | intersect: 796592574.5223169
[2026-03-01 03:47:03] 2026-03-01 02:45:54,006 | INFO     | chi2: 0.06321739500563543
[2026-03-01 03:47:03] 2026-03-01 02:45:54,007 | INFO     | current memory leak: -0.45 B/s (using 325 data points, chi2=0.06)
[2026-03-01 03:47:03] 2026-03-01 02:45:54,007 | INFO     | could have reported an average CPU frequency of 2249 MHz (16 samples)
[2026-03-01 03:47:03] 2026-03-01 02:45:54,007 | INFO     | ..............................
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . Timing measurements:
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . get job = 0 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . initial setup = 126 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . payload setup = 148 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . stage-in = 0 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . payload execution = 22124 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . stage-out = 4 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | . log creation = 1 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,008 | INFO     | ..............................
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | 
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | job summary report
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | --------------------------------------------------
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | PanDA job id: 7032738298
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | task id: 48843073
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | errors: (none)
[2026-03-01 03:47:03] 2026-03-01 02:45:54,131 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | pilot state: finished 
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | transexitcode: 0
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | exeerrorcode: 0
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | exeerrordiag: 
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | exitcode: 0
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | exitmsg: OK
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | cpuconsumptiontime: 84508 s
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | nevents: 400
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | neventsw: 0
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | pid: 24379
[2026-03-01 03:47:03] 2026-03-01 02:45:54,132 | INFO     | pgrp: 24379
[2026-03-01 03:47:03] 2026-03-01 02:45:54,133 | INFO     | corecount: 8
[2026-03-01 03:47:03] 2026-03-01 02:45:54,133 | INFO     | event service: False
[2026-03-01 03:47:03] 2026-03-01 02:45:54,133 | INFO     | sizes: {0: 2281258, 1: 2281944, 2: 2282405, 13: 2282405, 22277: 2316834, 22283: 2325834, 22284: 2326018, 22285: 2326212}
[2026-03-01 03:47:03] 2026-03-01 02:45:54,133 | INFO     | --------------------------------------------------
[2026-03-01 03:47:03] 2026-03-01 02:45:54,133 | INFO     | 
[2026-03-01 03:47:03] 2026-03-01 02:45:54,133 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-01 03:47:03] 2026-03-01 02:45:54,365 | INFO     | PID=19949 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 03:47:03] 2026-03-01 02:45:54,366 | INFO     | .. there are 2 such processes running
[2026-03-01 03:47:03] 2026-03-01 02:45:54,643 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,643 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 03:47:03] 2026-03-01 02:45:54,645 | INFO     | job 7032738298 has completed (purged errors)
[2026-03-01 03:47:03] 2026-03-01 02:45:54,646 | INFO     | overall cleanup function is called
[2026-03-01 03:47:03] 2026-03-01 02:45:55,654 | INFO     | --- collectZombieJob: --- 10, [24379]
[2026-03-01 03:47:03] 2026-03-01 02:45:55,655 | INFO     | zombie collector waiting for pid 24379
[2026-03-01 03:47:03] 2026-03-01 02:45:55,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 03:47:03] 2026-03-01 02:45:55,655 | INFO     | collected zombie processes
[2026-03-01 03:47:03] 2026-03-01 02:45:55,655 | INFO     | will attempt to kill all subprocesses of pid=24379
[2026-03-01 03:47:03] 2026-03-01 02:45:55,729 | INFO     | process IDs to be killed: [24379] (in reverse order)
[2026-03-01 03:47:03] 2026-03-01 02:45:56,532 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 03:47:03] 2026-03-01 02:45:56,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 03:47:03] 2026-03-01 02:45:56,534 | INFO     | did not find any defunct processes belonging to 24379
[2026-03-01 03:47:03] 2026-03-01 02:45:56,536 | INFO     | did not find any defunct processes belonging to 24379
[2026-03-01 03:47:03] 2026-03-01 02:45:56,536 | INFO     | ready for new job
[2026-03-01 03:47:03] 2026-03-01 02:45:56,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 03:47:03] 2026-03-01 02:45:56,538 | INFO     | **************************************
[2026-03-01 03:47:03] 2026-03-01 02:45:56,539 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 03:47:03] 2026-03-01 02:45:56,539 | INFO     | **************************************
[2026-03-01 03:47:03] 2026-03-01 02:45:56,539 | INFO     | 
[2026-03-01 03:47:03] 2026-03-01 02:45:56,539 | INFO     | pilot is running in a VM
[2026-03-01 03:47:03] 2026-03-01 02:45:56,540 | INFO     | architecture information:
[2026-03-01 03:47:03] 2026-03-01 02:45:56,548 | INFO     | executing command: cat /etc/os-release
[2026-03-01 03:47:03] 2026-03-01 02:45:56,877 | INFO     | cat /etc/os-release:
[2026-03-01 03:47:03] NAME="CentOS Linux"
[2026-03-01 03:47:03] VERSION="7 (Core)"
[2026-03-01 03:47:03] ID="centos"
[2026-03-01 03:47:03] ID_LIKE="rhel fedora"
[2026-03-01 03:47:03] VERSION_ID="7"
[2026-03-01 03:47:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 03:47:03] ANSI_COLOR="0;31"
[2026-03-01 03:47:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 03:47:03] HOME_URL="https://www.centos.org/"
[2026-03-01 03:47:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 03:47:03] 
[2026-03-01 03:47:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 03:47:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 03:47:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 03:47:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 03:47:03] 
[2026-03-01 03:47:03] 2026-03-01 02:45:56,877 | INFO     | **************************************
[2026-03-01 03:47:03] 2026-03-01 02:45:57,381 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-01 03:47:03] 2026-03-01 02:45:57,653 | INFO     | sufficient remaining disk space (496583573504 B)
[2026-03-01 03:47:03] 2026-03-01 02:45:57,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 03:47:03] 2026-03-01 02:45:57,654 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 03:47:03] 2026-03-01 02:45:57,654 | INFO     | update_server=False
[2026-03-01 03:47:03] 2026-03-01 02:45:57,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 03:47:03] 2026-03-01 02:45:57,756 | INFO     | all job control threads have been joined
[2026-03-01 03:47:03] 2026-03-01 02:45:57,857 | INFO     | all payload control threads have been joined
[2026-03-01 03:47:03] 2026-03-01 02:45:57,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 03:47:03] 2026-03-01 02:45:58,216 | INFO     | all data control threads have been joined
[2026-03-01 03:47:03] 2026-03-01 02:45:58,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:47:03] 2026-03-01 02:45:58,552 | INFO     | aborting loop
[2026-03-01 03:47:03] 2026-03-01 02:45:58,660 | INFO     | [job] retrieve thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:58,720 | INFO     | [payload] validate_post thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:58,722 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:58,762 | INFO     | [job] control thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:58,862 | INFO     | [payload] control thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:58,933 | INFO     | [payload] failed_post thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 03:47:03] 2026-03-01 02:45:59,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:47:03] 2026-03-01 02:45:59,222 | INFO     | [data] control thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,229 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,289 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,532 | INFO     | [data] copytool_in thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,558 | INFO     | [job] job monitor thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,909 | INFO     | [data] copytool_out thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:45:59,928 | INFO     | [job] validate thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:46:00,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:46:00,162 | INFO     | [job] queue monitor thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:46:03,097 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 03:47:03] 2026-03-01 02:46:26,499 | INFO     | PID=19949 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 03:47:03] 2026-03-01 02:46:26,499 | INFO     | .. there are 2 such processes running
[2026-03-01 03:47:03] 2026-03-01 02:46:26,499 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 03:47:03] 2026-03-01 02:46:26,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 03:47:03] 2026-03-01 02:46:26,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 03:47:03] 2026-03-01 02:46:53,803 | INFO     | [monitor] cgroup control has ended
[2026-03-01 03:47:03] 2026-03-01 02:46:53,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712711001920)>', '<ExcThread(monitor, started 139711989409536)>']
[2026-03-01 03:47:03] 2026-03-01 02:46:54,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 03:47:03] 2026-03-01 02:46:54,668 | INFO     | [monitor] control thread has ended
[2026-03-01 03:47:03] 2026-03-01 02:46:58,921 | INFO     | all workflow threads have been joined
[2026-03-01 03:47:03] 2026-03-01 02:46:58,921 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 03:47:03] 2026-03-01 02:46:58,921 | INFO     | traces error code: 0
[2026-03-01 03:47:03] 2026-03-01 02:46:58,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 03:47:03] 2026-03-01 02:46:59,135 [wrapper] ==== pilot stdout END ====
[2026-03-01 03:47:03] 2026-03-01 02:46:59,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 03:47:03] 2026-03-01 02:46:59,219 [wrapper] pilotpid: 19949
[2026-03-01 03:47:03] 2026-03-01 02:46:59,334 [wrapper] Pilot exit status: 0
[2026-03-01 03:47:03] 2026-03-01 02:46:59,830 [wrapper] pandaids: 7032738298
[2026-03-01 03:47:03] 2026-03-01 02:47:00,896 [wrapper] cleanup supervisor_pilot 31214 19950
[2026-03-01 03:47:03] 2026-03-01 02:47:00,975 [wrapper] Test setup, not cleaning
[2026-03-01 03:47:03] 2026-03-01 02:47:01,088 [wrapper] apfmon messages muted
[2026-03-01 03:47:03] 2026-03-01 02:47:01,192 [wrapper] ==== wrapper stdout END ====
[2026-03-01 03:47:03] 2026-03-01 02:47:01,322 [wrapper] ==== wrapper stderr END ====
[2026-03-01 03:47:03]  *** Error codes and diagnostics ***
[2026-03-01 03:47:03]     "exeErrorCode": 0,
[2026-03-01 03:47:03]     "exeErrorDiag": "",
[2026-03-01 03:47:03]     "pilotErrorCode": 0,
[2026-03-01 03:47:03]     "pilotErrorDiag": "",
[2026-03-01 03:47:03]  *** Listing of results directory ***
[2026-03-01 03:47:03] total 544380
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc    584627 Feb 28 06:38 pilot3.tar.gz
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc      5111 Feb 28 06:40 queuedata.json
[2026-03-01 03:47:03] -rwx------. 1 boinc boinc     36322 Feb 28 06:40 runpilot2-wrapper.sh
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc       100 Feb 28 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 03:47:03] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 21:27 run_atlas
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc       105 Feb 28 21:27 job.xml
[2026-03-01 03:47:03] -rw-r--r--. 2 boinc boinc 289504179 Feb 28 21:27 EVNT.48450091._000005.pool.root.1
[2026-03-01 03:47:03] drwxrwx--x. 2 boinc boinc        68 Feb 28 21:27 shared
[2026-03-01 03:47:03] -rw-r--r--. 2 boinc boinc    597972 Feb 28 21:27 input.tar.gz
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc      6391 Feb 28 21:27 init_data.xml
[2026-03-01 03:47:03] -rw-r--r--. 2 boinc boinc     15845 Feb 28 21:27 start_atlas.sh
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc         0 Feb 28 21:27 boinc_lockfile
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc      2623 Feb 28 21:28 pandaJob.out
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc       415 Feb 28 21:34 workernode_map.json
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc    998790 Feb 28 21:34 agis_schedconf.cvmfs.json
[2026-03-01 03:47:03] drwx------. 5 boinc boinc      4096 Feb 28 21:34 pilot3
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc 256668228 Mar  1 03:44 HITS.48843073._000027.pool.root.1
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc       531 Mar  1 03:44 boinc_task_state.xml
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc        95 Mar  1 03:45 pilot_heartbeat.json
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc      1013 Mar  1 03:45 memory_monitor_summary.json
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc   1513015 Mar  1 03:45 agis_ddmendpoints.agis.ALL.json
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc    558758 Mar  1 03:45 log.48843073._000027.job.log.tgz.1
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc      6306 Mar  1 03:45 heartbeat.json
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc        28 Mar  1 03:46 wrapper_checkpoint.txt
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc      8192 Mar  1 03:46 boinc_mmap_file
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc      4881 Mar  1 03:46 pilotlog.txt
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc   3119875 Mar  1 03:47 log.48843073._000027.job.log.1
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc       357 Mar  1 03:47 output.list
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc       620 Mar  1 03:47 runtime_log
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc   3696640 Mar  1 03:47 result.tar.gz
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc      8832 Mar  1 03:47 runtime_log.err
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc       656 Mar  1 03:47 0ipNDmoESG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5g4KDmqNmYDo.diag
[2026-03-01 03:47:03] -rw-r--r--. 1 boinc boinc     20815 Mar  1 03:47 stderr.txt
[2026-03-01 03:47:03] HITS file was successfully produced:
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc 256668228 Mar  1 03:44 shared/HITS.pool.root.1
[2026-03-01 03:47:03]  *** Contents of shared directory: ***
[2026-03-01 03:47:03] total 537588
[2026-03-01 03:47:03] -rw-r--r--. 2 boinc boinc 289504179 Feb 28 21:27 ATLAS.root_0
[2026-03-01 03:47:03] -rw-r--r--. 2 boinc boinc    597972 Feb 28 21:27 input.tar.gz
[2026-03-01 03:47:03] -rw-r--r--. 2 boinc boinc     15845 Feb 28 21:27 start_atlas.sh
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc 256668228 Mar  1 03:44 HITS.pool.root.1
[2026-03-01 03:47:03] -rw-------. 1 boinc boinc   3696640 Mar  1 03:47 result.tar.gz
03:47:05 (15986): run_atlas exited; CPU time 84730.040348
03:47:05 (15986): called boinc_finish(0)

</stderr_txt>
]]>

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